miRNEST 2.0, an integrative microRNA resource :: BLAST
>51807_ptc-miR530b:pmrd
Length = 172
Score = 264 bits (133), Expect = 2e-71
Identities = 165/173 (95%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 10 gccaatatgttgcctt-atctgcatttgcacctgcatcttatgcgttggtttcgtttttg 68
|||||||||||||||| ||||||||||||||||||||||| |||||| |||| |||||||
Sbjct: 1 gccaatatgttgcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttg 60
Query: 69 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaatggacatatggaaa 128
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 61 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaat-tagatatggaaa 119
Query: 129 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccatgttggt 181
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 120 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 172
>53341_ptc-miRf11519-akr:pmrd
Length = 152
Score = 240 bits (121), Expect = 3e-64
Identities = 143/149 (95%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 24 ttatctgcatttgcacctgcatcttatgcgttggtttcgtttttgactccacaaacaaaa 83
||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||
Sbjct: 5 ttatctgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaa 64
Query: 84 tcaagttctgtcgatacagtatgtgggacaatggacatatggaaactaataagcttagtt 143
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 65 tcaagttctgtcgatacagtatgtgggacaat-tagatatggaaactaataagcttagtt 123
Query: 144 gaggtgcaggtgcaagtgcaggtgaatgc 172
|||||||||||||||||||||||||||||
Sbjct: 124 gaggtgcaggtgcaagtgcaggtgaatgc 152
>51806_ptc-miR530a:pmrd
Length = 144
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaatgccatgttggt 181
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgccatgttggt 144
Score = 50.1 bits (25), Expect = 6e-07
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 10 gccaatatgttgcctt-atctgcatttgcacctgcatctta 49
||||| |||||||||| ||||||||||||||||||| ||||
Sbjct: 1 gccaacatgttgcctttatctgcatttgcacctgcacctta 41
>52847_ptc-miRf11025-akr:pmrd
Length = 138
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaatgccatgtt 178
|||||||||||||||| ||||||||||||||||||||
Sbjct: 102 ttgaggtgcaggtgcaggtgcaggtgaatgccatgtt 138
Score = 46.1 bits (23), Expect = 1e-05
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 16 atgttgcctt-atctgcatttgcacctgcatctta 49
|||||||||| ||||||||||||||||||| ||||
Sbjct: 4 atgttgcctttatctgcatttgcacctgcacctta 38
>52848_ptc-miRf11026-akr:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaatgc 172
|||||||||||||||| ||||||||||||||
Sbjct: 94 ttgaggtgcaggtgcaggtgcaggtgaatgc 124
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 ttatctgcatttgcacctgcatctta 49
||||||||||||||||||||| ||||
Sbjct: 5 ttatctgcatttgcacctgcacctta 30
>51904_ptc-miRf10082-akr:pmrd
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaa 169
|||||||||||||||| |||||||||||
Sbjct: 91 ttgaggtgcaggtgcaggtgcaggtgaa 118
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 ttatctgcatttgcacctgcatctta 49
||||||||||||||||||||| ||||
Sbjct: 2 ttatctgcatttgcacctgcacctta 27
>46904_aqc-miR530:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 tctgcatttgcacctgcatct 47
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
