miRNEST 2.0, an integrative microRNA resource :: BLAST
>51695_ptc-miR171l:pmrd
Length = 112
Score = 214 bits (108), Expect = 1e-56
Identities = 111/112 (99%)
Strand = Plus / Plus
Query: 16 ggagaagtagacacggcgtgatattggtccggctcatcttctgtgcataagcatctgaag 75
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagaagtagacacggtgtgatattggtccggctcatcttctgtgcataagcatctgaag 60
Query: 76 ttcttcactcatgaagacgagccgaatcaatatcactcttgtatgcttcttc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcttcactcatgaagacgagccgaatcaatatcactcttgtatgcttcttc 112
>51798_ptc-miR479:pmrd
Length = 85
Score = 163 bits (82), Expect = 4e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 33 gtgatattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatgaaga 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtgatattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatgaaga 63
Query: 93 cgagccgaatcaatatcactct 114
||||||||||||||||||||||
Sbjct: 64 cgagccgaatcaatatcactct 85
>51696_ptc-miR171m:pmrd
Length = 101
Score = 89.7 bits (45), Expect = 5e-19
Identities = 92/106 (86%), Gaps = 5/106 (4%)
Strand = Plus / Plus
Query: 19 gaagtagacacggcgtgatattggtccggctcatcttctgtgcataagcatctgaagttc 78
|||| ||||| |||||| ||||| ||||||||||||||||| || ||||| |||||||
Sbjct: 1 gaagcagacatggcgtggtattgatccggctcatcttctgt--atttgcatcagaagttc 58
Query: 79 ttcactcatgaagacgagccgaatcaatatcactcttgtatgcttc 124
||| || ||||||||||||||||||||||||||||||| |||||
Sbjct: 59 ttcgct---gaagacgagccgaatcaatatcactcttgtacgcttc 101
>51697_ptc-miR171n:pmrd
Length = 101
Score = 73.8 bits (37), Expect = 3e-14
Identities = 90/106 (84%), Gaps = 5/106 (4%)
Strand = Plus / Plus
Query: 19 gaagtagacacggcgtgatattggtccggctcatcttctgtgcataagcatctgaagttc 78
|||| ||||| |||||| ||||| |||||||| |||||||| || ||||| ||||||
Sbjct: 1 gaagcagacatggcgtggtattgatccggctcttcttctgt--atttgcatcagaagttt 58
Query: 79 ttcactcatgaagacgagccgaatcaatatcactcttgtatgcttc 124
||| || ||||||||||||||||||||||||||||||| |||||
Sbjct: 59 ttcgct---gaagacgagccgaatcaatatcactcttgtacgcttc 101
>54894_vvi-miR479:pmrd
Length = 94
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 89 aagacgagccgaatcaatatcactcttgtatgcttc 124
||||||||||||| ||||||||||||||||||||||
Sbjct: 59 aagacgagccgaaccaatatcactcttgtatgcttc 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 22 gtagacacggcgtgatattggtccggctcatcttct 57
||||||| || ||| ||||||| |||||||||||||
Sbjct: 1 gtagacatggtgtggtattggttcggctcatcttct 36
>48568_gma-miR171b:pmrd
Length = 92
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 90 agacgagccgaatcaatatcactcttgtatgctt 123
|||||||||||||||||||||||||||| |||||
Sbjct: 59 agacgagccgaatcaatatcactcttgtttgctt 92
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 23 tagacacggcgtgatattggtccggctcatctt 55
||||||||||||||||||||| |||||||||||
Sbjct: 1 tagacacggcgtgatattggtacggctcatctt 33
>48721_mtr-miR171b:pmrd
Length = 135
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 92 acgagccgaatcaatatcactcttgtatgcttc 124
|||||||||||||||||||||||||| ||||||
Sbjct: 1 acgagccgaatcaatatcactcttgtttgcttc 33
>46854_ach-miR171:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 93 cgagccgaatcaatatcactcttgtat 119
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Sbjct: 89 cgagccgaatcaatatcactcttgtat 115
