miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 117 bits (59), Expect = 7e-27
Identities = 144/170 (84%), Gaps = 2/170 (1%)
Strand = Plus / Plus
Query: 11 cgagacgaatcttttgaccctaattacnccatgattttaccatatgatgctacagtaaac 70
||||||||||||||| | ||||||| | ||||||| | || || || |||||||||||||
Sbjct: 66 cgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctacagtaaac 125
Query: 71 actttgctaataacagattaattaggcttaataaatttatctcgtagtttcctggcagaa 130
| ||||||||| || |||||||||||||||||||||| ||||| ||||| | | | ||
Sbjct: 126 a-tttgctaatgacggattaattaggcttaataaattcgtctcgcagtttacagacggat 184
Query: 131 tctgtaatttgttttattattggactacgtttaattccttcaaatgtgtg 180
||||||||||||||| ||||| | ||||| |||| | |||||||||||||
Sbjct: 185 tctgtaatttgttttgttattagtctacg-ttaaatacttcaaatgtgtg 233
>49008_osa-miR445a:pmrd
Length = 268
Score = 75.8 bits (38), Expect = 2e-14
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaattacnccatgattttaccatatgatgctacagtaaac 70
||||||||||||||||| |||||||| ||||||||| || || ||||||||||||||||
Sbjct: 185 cgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaac 126
Query: 71 actttgctaataacagattaattaggcttaataaatt 107
||| |||| | |||||||||||||||| |||||
Sbjct: 125 -ttttcataattatggattaattaggcttaaaaaatt 90
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 67.9 bits (34), Expect = 6e-12
Identities = 82/97 (84%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 11 cgagacgaatcttttgaccctaattacnccatgattttaccatatgatgctacagtaaac 70
||||||| ||||||| | ||||||| | |||| |||| || || || ||||| |||||||
Sbjct: 21 cgagacggatcttttaagcctaattgcaccataatttgacaatgtggtgctaaagtaaac 80
Query: 71 actttgctaataacagattaattaggcttaataaatt 107
| ||||||||| | ||||||||||||||||||||||
Sbjct: 81 a-tttgctaatgatggattaattaggcttaataaatt 116
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 67.9 bits (34), Expect = 6e-12
Identities = 103/125 (82%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 11 cgagacgaatcttttgaccctaattacnccatgattttaccatatgatgctacagtaaac 70
||||||||||||||| ||||||| | |||| |||| || || | || |||| |||||
Sbjct: 20 cgagacgaatcttttaggcctaattgcgccataatttaacaatgttgtggtacaataaac 79
Query: 71 actttgctaataacagattaattaggcttaataaatttatctcgtagtttcctggcagaa 130
| ||||||||| || |||||||||||||| ||||||| |||| | |||||||||||||
Sbjct: 80 a-tttgctaatgacggattaattaggcttcataaattcatcttgcgatttcctggcagaa 138
Query: 131 tctgt 135
|||||
Sbjct: 139 tctgt 143
>49015_osa-miR445h:pmrd
Length = 277
Score = 50.1 bits (25), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaattacnccatgatt 46
||||||||||||||||| |||||||| ||||||||
Sbjct: 181 cgagacgaatcttttgagtctaattacaccatgatt 146
>49013_osa-miR445f:pmrd
Length = 305
Score = 50.1 bits (25), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaattacnccatgatt 46
||||||||||||||||| |||||||| ||||||||
Sbjct: 196 cgagacgaatcttttgagtctaattacaccatgatt 161
>49012_osa-miR445e:pmrd
Length = 265
Score = 50.1 bits (25), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaattacnccatgatt 46
||||||||||||||||| |||||||| ||||||||
Sbjct: 175 cgagacgaatcttttgagtctaattacaccatgatt 140
>49010_osa-miR445c:pmrd
Length = 260
Score = 50.1 bits (25), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaattacnccatgatt 46
||||||||||||||| | ||||||||| ||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgatt 138
>49009_osa-miR445b:pmrd
Length = 264
Score = 50.1 bits (25), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaattacnccatgatt 46
||||||||||||||||| |||||||| ||||||||
Sbjct: 174 cgagacgaatcttttgagtctaattacaccatgatt 139
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 13 agacgaatcttttgaccctaattacnccatgatt 46
||||||||||||||| |||||||| ||||||||
Sbjct: 12 agacgaatcttttgagcctaattagtccatgatt 45
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaattacnccatgattt 47
||||||||||||||||| ||||||| |||||||||
Sbjct: 112 cgagacgaatcttttgagtctaattagcccatgattt 76
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 8e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 cgagacgaatcttttgaccctaatta 36
||||||||||||||||| ||||||||
Sbjct: 13 cgagacgaatcttttgagcctaatta 38
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 8e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaatta 36
||||||||||||||||| ||||||||
Sbjct: 68 cgagacgaatcttttgagcctaatta 43
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 8e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 cgagacgaatcttttgaccctaatta 36
||||||||||||||||| ||||||||
Sbjct: 9 cgagacgaatcttttgagcctaatta 34
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 8e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 cgagacgaatcttttgaccctaatta 36
||||||||||||||||| ||||||||
Sbjct: 10 cgagacgaatcttttgagcctaatta 35
Score = 44.1 bits (22), Expect = 8e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaatta 36
||||||||||||||||| ||||||||
Sbjct: 113 cgagacgaatcttttgagcctaatta 88
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 8e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 cgagacgaatcttttgaccctaatta 36
||||||||||||||||| ||||||||
Sbjct: 116 cgagacgaatcttttgagcctaatta 91
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 gagacgaatcttttgaccctaatta 36
|||||||||||||||| ||||||||
Sbjct: 14 gagacgaatcttttgagcctaatta 38
