miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 71/82 (86%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctctgtaaactaatataaaaacgtttagattattaaagtagtg-tcctaaatctctt 67
          ||||||||||||||||||||| | | ||||||| | |||||||||| ||  |||  ||||
Sbjct: 4  tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63

                                
Query: 68 atattagtttacggagggagta 89
          |||||||||||| |||||||||
Sbjct: 64 atattagtttacagagggagta 85



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 7  actccctctgtaaactaatataa 29
          |||||||||||||||||||||||
Sbjct: 84 actccctctgtaaactaatataa 62




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 70/82 (85%), Gaps = 2/82 (2%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctctgtaaactaatataaaaacgtttagattattaaagtagtgtcctaaatc-tctt 67
          ||||||||||||||||||||| | | ||||||| | ||| ||||||  |||||   ||||
Sbjct: 4  tccctctgtaaactaatataagaccttttagatcactaa-gtagtgatctaaaaggtctt 62

                                
Query: 68 atattagtttacggagggagta 89
          |||||||||||| |||||||||
Sbjct: 63 atattagtttacagagggagta 84



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 7  actccctctgtaaactaatataa 29
          |||||||||||||||||||||||
Sbjct: 83 actccctctgtaaactaatataa 61




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 69/84 (82%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  actccctctgtaaactaatataaaaacgtttagattattaaagtagtgtcctaaat-ctc 65
          ||||||||||||||  ||||| | |  |||||||| | | ||||||||  |||||  |||
Sbjct: 10 actccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgctc 69

                                  
Query: 66 ttatattagtttacggagggagta 89
          |||||||  |||||||||||||||
Sbjct: 70 ttatatttctttacggagggagta 93