miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q3KRG3|TSR2_DANRE Pre-rRNA-processing protein TSR2 homolog
           OS=Danio rerio GN=tsr2 PE=2 SV=1
          Length = 181

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 23/88 (26%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
 Frame = -1

Query: 314 KSQELSERIFSFFTQSKEQVYIDDLEEILDEFMLSDFNTEVGDGSIEEVAEKMMIMHEEC 135
           K++ + + +  +FT + + +  D++E+ + E M ++F+T V DGS+ +VA+++  M ++C
Sbjct: 42  KAEWMVDALQQYFTDNGD-LQPDEVEDFISELMNNEFDTVVDDGSLPQVAQQVCGMFQQC 100

Query: 134 TEGSFESINE------LKRTNPGNSAVT 69
            +G    + E       K+T+ G +  T
Sbjct: 101 EQGRLAEVREQILKLNQKKTSSGRAKAT 128