miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P93111|HEM11_CUCSA Glutamyl-tRNA reductase 1, chloroplastic
OS=Cucumis sativus GN=HEMA1 PE=2 SV=1
Length = 552
Score = 79.0 bits (193), Expect = 9e-15
Identities = 41/60 (68%), Positives = 43/60 (71%)
Frame = +2
Query: 2 VSQGVAGFGRNISGLFKHAIMVGKRVRTETKIXXXXXXXXXXXXELALMKLPNSAHSTAR 181
V QGVAGFGRNISGLFKHAI VGKRVRTET I ELALMKLP +H+TAR
Sbjct: 228 VGQGVAGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEPSHATAR 287
>sp|P49294|HEM12_ARATH Glutamyl-tRNA reductase 2, chloroplastic
OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2
Length = 530
Score = 73.9 bits (180), Expect = 3e-13
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +2
Query: 2 VSQGVAGFGRNISGLFKHAIMVGKRVRTETKIXXXXXXXXXXXXELALMKLPNSAHSTA 178
V QGV GFGRNISGLFKHAI VGKRVRTET I ELALMKLP S+H+++
Sbjct: 212 VGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPESSHASS 270
>sp|P42804|HEM11_ARATH Glutamyl-tRNA reductase 1, chloroplastic
OS=Arabidopsis thaliana GN=HEMA1 PE=1 SV=2
Length = 543
Score = 73.2 bits (178), Expect = 5e-13
Identities = 39/60 (65%), Positives = 42/60 (70%)
Frame = +2
Query: 2 VSQGVAGFGRNISGLFKHAIMVGKRVRTETKIXXXXXXXXXXXXELALMKLPNSAHSTAR 181
V QGV GFGRNISGLFKHAI VGKRVRTET I ELALMKLP S++ +AR
Sbjct: 221 VGQGVNGFGRNISGLFKHAITVGKRVRTETNIASGAVSVSSAAVELALMKLPQSSNVSAR 280
>sp|P49295|HEM12_CUCSA Glutamyl-tRNA reductase 2, chloroplastic
OS=Cucumis sativus GN=HEMA2 PE=2 SV=1
Length = 542
Score = 66.2 bits (160), Expect = 6e-11
Identities = 35/58 (60%), Positives = 39/58 (67%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIXXXXXXXXXXXXELALMKLPNSAHSTAR 181
QGVAGF R ISGLFKHAI VGKRVRTET I ELA KLP S+++TA+
Sbjct: 222 QGVAGFDRKISGLFKHAITVGKRVRTETNISSGSFSVSSAAVELAQKKLPESSYATAK 279
>sp|O65796|HEM13_HORVU Glutamyl-tRNA reductase 3, chloroplastic
OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1
Length = 535
Score = 50.1 bits (118), Expect = 4e-06
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIXXXXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKRVR+ET I ELALMKLP S +AR
Sbjct: 210 QNSGGLGKNIDRMFKDAITAGKRVRSETNISCGAVSVSSAAVELALMKLPKSECLSAR 267
>sp|P0C587|HEM1_ORYSJ Glutamyl-tRNA reductase, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2
SV=1
Length = 537
Score = 49.3 bits (116), Expect = 7e-06
Identities = 28/58 (48%), Positives = 31/58 (53%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIXXXXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKRVR ET I ELALMKLP S +AR
Sbjct: 214 QNSGGLGKNIDRMFKDAITAGKRVRCETNISSGAVSVSSAAVELALMKLPKSECLSAR 271
>sp|A2Z928|HEM1_ORYSI Glutamyl-tRNA reductase, chloroplastic
OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2
Length = 537
Score = 49.3 bits (116), Expect = 7e-06
Identities = 28/58 (48%), Positives = 31/58 (53%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIXXXXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKRVR ET I ELALMKLP S +AR
Sbjct: 214 QNSGGLGKNIDRMFKDAITAGKRVRCETNISSGAVSVSSAAVELALMKLPKSECLSAR 271
>sp|Q42843|HEM11_HORVU Glutamyl-tRNA reductase 1, chloroplastic
OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1
Length = 527
Score = 48.5 bits (114), Expect = 1e-05
Identities = 27/58 (46%), Positives = 31/58 (53%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIXXXXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKRVR ET I ELA+MKLP S +AR
Sbjct: 204 QNSGGLGKNIDRMFKDAITAGKRVRCETNISAGAVSVSSAAVELAMMKLPKSECLSAR 261
>sp|Q96563|HEM12_HORVU Glutamyl-tRNA reductase 2 (Fragment)
OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1
Length = 465
Score = 47.0 bits (110), Expect = 4e-05
Identities = 26/58 (44%), Positives = 30/58 (51%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIXXXXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKR R ET I ELA+MKLP S +AR
Sbjct: 142 QNSGGLGKNIDRMFKDAITAGKRARCETNISAGAVSVSSAAVELAMMKLPKSECLSAR 199
