miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza
sativa subsp. japonica GN=MADS27 PE=2 SV=2
Length = 240
Score = 49.3 bits (116), Expect = 8e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -3
Query: 142 FWQREAASLRQQLHNLQENHRYVL 71
FWQREAASLRQQLHNLQENHR ++
Sbjct: 88 FWQREAASLRQQLHNLQENHRQLM 111
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza
sativa subsp. japonica GN=MADS57 PE=2 SV=2
Length = 241
Score = 43.9 bits (102), Expect = 3e-04
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = -3
Query: 139 WQREAASLRQQLHNLQENHRYVL 71
WQREAASLRQQLHNLQE+H+ ++
Sbjct: 88 WQREAASLRQQLHNLQESHKQLM 110
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza
sativa subsp. japonica GN=MADS23 PE=2 SV=1
Length = 159
Score = 43.1 bits (100), Expect = 6e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -3
Query: 139 WQREAASLRQQLHNLQENHRYVL 71
WQ+EAASLRQQLHNLQE HR +L
Sbjct: 89 WQQEAASLRQQLHNLQEYHRQLL 111
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21
OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1
Length = 228
Score = 42.7 bits (99), Expect = 7e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 142 FWQREAASLRQQLHNLQENHRYVL 71
FWQREAA LRQ+LH LQENHR ++
Sbjct: 88 FWQREAAVLRQELHALQENHRQMM 111
