miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9C099|LRCC1_HUMAN Leucine-rich repeat_field and coiled-coil
            domain-containing protein 1 OS=Homo sapiens GN=LRRCC1
            PE=2 SV=2
          Length = 1032

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = +3

Query: 3    DEHIVSLLDSLCKIKKAYEEKLLKKSNSV--LINEIQVREQVLEKLKSLAKNKDNEIARL 176
            DEHI  L + + +I+K  +E+L +KS+ +  ++ +++   +  EKLK   K K+ E+  +
Sbjct: 837  DEHIKRLQEKITEIEKCTQEQLDEKSSQLDEVLEKLERHNERKEKLKQQLKGKEVELEEI 896

Query: 177  RRAYNDLETGNKKLDDE 227
            R+AY+ L   N+K  D+
Sbjct: 897  RKAYSTL---NRKWHDK 910