miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7
OS=Spinacia oleracea GN=RH7 PE=2 SV=1
Length = 685
Score = 79.0 bits (193), Expect = 9e-15
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +2
Query: 2 RFLPEDKVDSIKGLALTADGNGAVFDVATEDLDAFLAGQENAANVSLEVLKALPRLQERD 181
RFLP K DSI G+ALTAD +GAVFDV +DL+ FL G ENAA V+L+V+KALP L+E+
Sbjct: 580 RFLPATKADSIMGVALTADKSGAVFDVPVDDLETFLVGAENAAGVNLDVVKALPPLEEKV 639
Query: 182 Q 184
Q
Sbjct: 640 Q 640
>sp|Q39189|RH7_ARATH DEAD-box ATP-dependent RNA helicase 7
OS=Arabidopsis thaliana GN=RH7 PE=1 SV=2
Length = 671
Score = 75.1 bits (183), Expect = 1e-13
Identities = 37/61 (60%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 RFLPEDKVDSIKGLALTADGNGAVFDVATEDLDAFLAG-QENAANVSLEVLKALPRLQER 178
R LP+DKV+ I+GL+LTAD GAVFDV DLD F+AG Q++A ++SLEV+K +P+LQER
Sbjct: 569 RVLPDDKVEMIEGLSLTADKTGAVFDVKQSDLDLFIAGAQKSAGSMSLEVVKVMPKLQER 628
Query: 179 D 181
+
Sbjct: 629 E 629
>sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Oryza
sativa subsp. japonica GN=Os09g0520700 PE=2 SV=1
Length = 696
Score = 70.5 bits (171), Expect = 3e-12
Identities = 30/61 (49%), Positives = 48/61 (78%)
Frame = +2
Query: 2 RFLPEDKVDSIKGLALTADGNGAVFDVATEDLDAFLAGQENAANVSLEVLKALPRLQERD 181
RF+PE+++ +KG+ +TADG GAVFDV + +++ ++ G +NAA V++E +K LP LQER+
Sbjct: 589 RFMPEERLADVKGITITADGTGAVFDVPSAEVEDYIQGAQNAAMVTVEEVKQLPPLQERE 648
Query: 182 Q 184
Q
Sbjct: 649 Q 649
