miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9LF38|EDL1_ARATH EID1-like F-box protein 1 OS=Arabidopsis
thaliana GN=EDL1 PE=2 SV=1
Length = 293
Score = 87.8 bits (216), Expect = 2e-17
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +3
Query: 3 IQIPGHFVYRTRFSRTSXKSFLLPQCRTDVLYVSDPCEHLDQGEEG 140
+QIPGHFVYRTRFSRT +S L PQCRTDVLYV DPCEHLDQGEEG
Sbjct: 110 VQIPGHFVYRTRFSRTLGRSLLPPQCRTDVLYVCDPCEHLDQGEEG 155
>sp|Q9FLZ8|EDL2_ARATH EID1-like F-box protein 2 OS=Arabidopsis
thaliana GN=EDL2 PE=2 SV=1
Length = 249
Score = 83.2 bits (204), Expect = 5e-16
Identities = 38/47 (80%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 IQIPGHFVYRTRFSRTSXKSFLLPQCRT-DVLYVSDPCEHLDQGEEG 140
+QI GHFV+RTRFSRTS +SFL PQCRT D+LYVSDPCEHLDQGE+G
Sbjct: 109 VQISGHFVHRTRFSRTSGRSFLPPQCRTDDILYVSDPCEHLDQGEDG 155
>sp|Q93ZT5|EDL3_ARATH EID1-like F-box protein 3 OS=Arabidopsis
thaliana GN=EDL3 PE=2 SV=1
Length = 272
Score = 51.2 bits (121), Expect = 2e-06
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +3
Query: 15 GHFVYRTRFSRTSXKSFLLPQCRTDVLYVSDPCEH 119
GHF +RFS+TS + FL CR D+LY+SDPCEH
Sbjct: 128 GHFACESRFSKTSGRFFLPKNCRRDLLYMSDPCEH 162
