miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12
PE=2 SV=2
Length = 558
Score = 61.6 bits (148), Expect(2) = 3e-10
Identities = 36/85 (42%), Positives = 43/85 (50%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
KSG AP V D+ ING PGPV +C SQ
Sbjct: 181 KSGLAPNVSDSHMINGHPGPVRNCPSQ--------------------------------- 207
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
GY L+VE+GKTY+LR++NAALNEEL
Sbjct: 208 GYKLSVENGKTYLLRLVNAALNEEL 232
Score = 22.3 bits (46), Expect(2) = 3e-10
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 293 KSDVEAVINEDLKVRVRP 240
KSD E +INE LK + P
Sbjct: 169 KSDTENIINEALKSGLAP 186
>sp|Q6ID18|LAC10_ARATH Laccase-10 OS=Arabidopsis thaliana GN=LAC10
PE=2 SV=1
Length = 558
Score = 60.5 bits (145), Expect(2) = 4e-10
Identities = 38/85 (44%), Positives = 41/85 (48%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
KSG AP V DA ING PG VP+C SQ
Sbjct: 179 KSGLAPNVSDAHVINGHPGFVPNCPSQG-------------------------------- 206
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
+ L VESGKTYMLR+INAALNEEL
Sbjct: 207 NFKLAVESGKTYMLRLINAALNEEL 231
Score = 23.1 bits (48), Expect(2) = 4e-10
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 293 KSDVEAVINEDLKVRVRP 240
KSD E V+NE LK + P
Sbjct: 167 KSDTETVVNEALKSGLAP 184
>sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica
GN=LAC4 PE=2 SV=1
Length = 579
Score = 55.5 bits (132), Expect = 1e-07
Identities = 34/85 (40%), Positives = 43/85 (50%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
++G P V DA TINGLPGP+ +CS+Q+
Sbjct: 185 QTGGGPNVSDAFTINGLPGPLYNCSAQDT------------------------------- 213
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
+ L V+ GKTYMLR+INAALNEEL
Sbjct: 214 -FKLKVKPGKTYMLRLINAALNEEL 237
>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica
GN=LAC22 PE=2 SV=2
Length = 564
Score = 55.1 bits (131), Expect = 1e-07
Identities = 31/83 (37%), Positives = 41/83 (49%)
Frame = -2
Query: 250 GFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLRGY 71
G P + D+ TING PGP+ C+S + G+
Sbjct: 187 GVGPNISDSHTINGHPGPLSECASSQ-------------------------------DGF 215
Query: 70 TLTVESGKTYMLRIINAALNEEL 2
L+VE+GKTYMLRIINAALN++L
Sbjct: 216 KLSVENGKTYMLRIINAALNDDL 238
>sp|Q9LMS3|LAC1_ARATH Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2
SV=1
Length = 581
Score = 54.7 bits (130), Expect = 2e-07
Identities = 33/85 (38%), Positives = 43/85 (50%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
K+G KV DA T+NGLPGP+ CS+++
Sbjct: 183 KTGAGAKVSDAYTLNGLPGPLYPCSTKDT------------------------------- 211
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
+T TV++GKTY+LRIINAALN EL
Sbjct: 212 -FTATVDAGKTYILRIINAALNNEL 235
>sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica
GN=LAC12 PE=2 SV=1
Length = 574
Score = 53.5 bits (127), Expect = 4e-07
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
++G P + DA T+NGLPGP+ +CS+Q+
Sbjct: 184 QTGGGPNISDAYTLNGLPGPLYNCSAQDT------------------------------- 212
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
+ L V+ GKTYMLR+INAALN+EL
Sbjct: 213 -FKLKVKPGKTYMLRLINAALNDEL 236
>sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica
GN=LAC2 PE=2 SV=1
Length = 562
Score = 53.1 bits (126), Expect = 5e-07
Identities = 34/84 (40%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -2
Query: 250 GFAPKVPDARTINGLPGP-VPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLRG 74
G AP + DA TING PGP VP CS +
Sbjct: 185 GMAPNMSDAHTINGKPGPLVPFCSEKHT-------------------------------- 212
Query: 73 YTLTVESGKTYMLRIINAALNEEL 2
Y L V+SGKTY+LRIINAA+N+EL
Sbjct: 213 YALQVQSGKTYLLRIINAAVNDEL 236
>sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17
PE=2 SV=1
Length = 577
Score = 52.0 bits (123), Expect = 1e-06
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
++G P V DA TINGLPGP+ +CS+++
Sbjct: 179 QTGGGPNVSDAYTINGLPGPLYNCSAKD-------------------------------- 206
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
+ L V+ GKTY+LR+INAALN+EL
Sbjct: 207 TFRLRVKPGKTYLLRLINAALNDEL 231
>sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2
SV=1
Length = 573
Score = 51.6 bits (122), Expect = 2e-06
Identities = 30/85 (35%), Positives = 41/85 (48%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
++G P DA T NGLPGP+ +CS+++
Sbjct: 184 QTGAGPNASDAHTFNGLPGPLYNCSTKD-------------------------------- 211
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
Y L V+ GKTY+LR+INAALN+EL
Sbjct: 212 TYKLMVKPGKTYLLRLINAALNDEL 236
>sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica
GN=LAC10 PE=2 SV=1
Length = 578
Score = 51.2 bits (121), Expect = 2e-06
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
++G P V DA TINGLPGP+ +CSS++
Sbjct: 186 QTGGGPNVSDAYTINGLPGPLYNCSSKD-------------------------------- 213
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
+ L V+ GK Y+LR+INAALN+EL
Sbjct: 214 TFRLKVQPGKMYLLRLINAALNDEL 238
>sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp.
japonica GN=LAC11 PE=5 SV=2
Length = 540
Score = 50.1 bits (118), Expect = 4e-06
Identities = 31/85 (36%), Positives = 39/85 (45%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
++G P V DA T NGLPGP +CSS ++
Sbjct: 147 QTGGGPNVSDAYTFNGLPGPTYNCSSSNDTF----------------------------- 177
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
L V GKTY+LR+INAALN+EL
Sbjct: 178 --KLRVRPGKTYLLRLINAALNDEL 200
>sp|Q5N9W4|LAC5_ORYSJ Putative laccase-5 OS=Oryza sativa subsp.
japonica GN=LAC5 PE=3 SV=1
Length = 547
Score = 49.7 bits (117), Expect = 6e-06
Identities = 28/85 (32%), Positives = 41/85 (48%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
++G P + DA T NGLPGP +CSS++
Sbjct: 193 QTGAGPNISDAYTFNGLPGPTYNCSSKD-------------------------------- 220
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
Y + V+ G+TY+LR+IN+ALN+EL
Sbjct: 221 TYKVKVQPGRTYLLRLINSALNDEL 245
>sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11
PE=2 SV=1
Length = 557
Score = 47.0 bits (110), Expect = 4e-05
Identities = 29/83 (34%), Positives = 37/83 (44%)
Frame = -2
Query: 250 GFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLRGY 71
G P + DA TING PGP+ CS + +
Sbjct: 182 GAPPPMSDAHTINGKPGPLFPCSEKHT--------------------------------F 209
Query: 70 TLTVESGKTYMLRIINAALNEEL 2
+ E+GKTY+LRIINAALN+EL
Sbjct: 210 VIEAEAGKTYLLRIINAALNDEL 232
>sp|Q941X2|LAC3_ORYSJ Laccase-3 OS=Oryza sativa subsp. japonica
GN=LAC3 PE=2 SV=1
Length = 567
Score = 42.4 bits (98), Expect = 0.001
Identities = 27/85 (31%), Positives = 39/85 (45%)
Frame = -2
Query: 256 KSGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLR 77
++G AP + DA TING PG + +CS +E +
Sbjct: 181 RTGAAPNISDAYTINGQPGDLYNCSKEETT------------------------------ 210
Query: 76 GYTLTVESGKTYMLRIINAALNEEL 2
+ V+ G+T +LR INAALN+EL
Sbjct: 211 --AVPVKPGETALLRFINAALNQEL 233
>sp|Q9LYQ2|LAC13_ARATH Laccase-13 OS=Arabidopsis thaliana GN=LAC13
PE=2 SV=1
Length = 569
Score = 42.4 bits (98), Expect = 0.001
Identities = 30/84 (35%), Positives = 39/84 (46%)
Frame = -2
Query: 253 SGFAPKVPDARTINGLPGPVPSCSSQEYSYIHLIVAVFMVNQSRFFSYSRMMKMLNYLRG 74
+G AP + DA TING PG + CSSQE L +L G
Sbjct: 181 TGAAPNISDAFTINGQPGDLYRCSSQE--------------------------TLRFLVG 214
Query: 73 YTLTVESGKTYMLRIINAALNEEL 2
SG+ +LR+IN+ALN+EL
Sbjct: 215 ------SGEIVLLRVINSALNQEL 232
