miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P0C884|SCL34_ARATH Scarecrow-like protein 34 OS=Arabidopsis
thaliana GN=SCL34 PE=3 SV=1
Length = 630
Score = 60.1 bits (144), Expect = 4e-09
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1
Query: 1 DFVFDEDGKWILQGWKGRILYASSCWVPA 87
DFV DE+ KW+LQGWKGR LYASSCWVPA
Sbjct: 602 DFVVDENSKWLLQGWKGRTLYASSCWVPA 630
>sp|Q3EDH0|SCL31_ARATH Scarecrow-like protein 31 OS=Arabidopsis
thaliana GN=SCL31 PE=2 SV=2
Length = 662
Score = 57.8 bits (138), Expect = 2e-08
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 1 DFVFDEDGKWILQGWKGRILYASSCWVPA 87
DFV DED W LQGWKGRIL++SSCWVP+
Sbjct: 634 DFVLDEDSNWFLQGWKGRILFSSSCWVPS 662
>sp|Q9LTI5|SCL11_ARATH Scarecrow-like protein 11 OS=Arabidopsis
thaliana GN=SCL11 PE=2 SV=1
Length = 610
Score = 54.3 bits (129), Expect = 2e-07
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1
Query: 1 DFVFDEDGKWILQGWKGRILYASSCWVPA 87
DFV D D W+LQGWKGR++YA SCW PA
Sbjct: 572 DFVIDSDNNWMLQGWKGRVIYAFSCWKPA 600
>sp|Q9SNB8|SCL30_ARATH Scarecrow-like protein 30 OS=Arabidopsis
thaliana GN=SCL30 PE=2 SV=1
Length = 583
Score = 53.1 bits (126), Expect = 5e-07
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1
Query: 1 DFVFDEDGKWILQGWKGRILYASSCWVPA 87
DFV D D W+ QGWKGR+LYA SCW PA
Sbjct: 553 DFVIDNDNHWMFQGWKGRVLYAVSCWKPA 581
>sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14 OS=Arabidopsis
thaliana GN=SCL14 PE=2 SV=2
Length = 769
Score = 50.4 bits (119), Expect = 3e-06
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +1
Query: 1 DFVFDEDGKWILQGWKGRILYASSCWVPA 87
+F D++G W+LQGWKGRI+YASS WVP+
Sbjct: 739 NFDVDQNGNWLLQGWKGRIVYASSLWVPS 767
>sp|P0C883|SCL33_ARATH Scarecrow-like protein 33 OS=Arabidopsis
thaliana GN=SCL33 PE=3 SV=1
Length = 694
Score = 47.0 bits (110), Expect = 4e-05
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 1 DFVFDEDGKWILQGWKGRILYASSCWVP 84
+F D+D W+LQGWKGRI+Y SS WVP
Sbjct: 666 EFDVDQDCHWLLQGWKGRIVYGSSIWVP 693
>sp|O80933|SCL9_ARATH Scarecrow-like protein 9 OS=Arabidopsis
thaliana GN=SCL9 PE=2 SV=1
Length = 718
Score = 45.8 bits (107), Expect = 8e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 1 DFVFDEDGKWILQGWKGRILYASSCWVP 84
DFV D+D +W+LQGWKGR + A S W P
Sbjct: 687 DFVIDQDNRWLLQGWKGRTVMALSVWKP 714
