miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P0C884|SCL34_ARATH Scarecrow-like protein 34 OS=Arabidopsis
thaliana GN=SCL34 PE=3 SV=1
Length = 630
Score = 57.8 bits (138), Expect = 2e-08
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 3 FVFDEDGKWILQGWKGRILYASSCWVPA 86
FV DE+ KW+LQGWKGR LYASSCWVPA
Sbjct: 603 FVVDENSKWLLQGWKGRTLYASSCWVPA 630
>sp|Q3EDH0|SCL31_ARATH Scarecrow-like protein 31 OS=Arabidopsis
thaliana GN=SCL31 PE=2 SV=2
Length = 662
Score = 55.5 bits (132), Expect = 1e-07
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 FVFDEDGKWILQGWKGRILYASSCWVPA 86
FV DED W LQGWKGRIL++SSCWVP+
Sbjct: 635 FVLDEDSNWFLQGWKGRILFSSSCWVPS 662
>sp|Q9LTI5|SCL11_ARATH Scarecrow-like protein 11 OS=Arabidopsis
thaliana GN=SCL11 PE=2 SV=1
Length = 610
Score = 52.0 bits (123), Expect = 1e-06
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +3
Query: 3 FVFDEDGKWILQGWKGRILYASSCWVPA 86
FV D D W+LQGWKGR++YA SCW PA
Sbjct: 573 FVIDSDNNWMLQGWKGRVIYAFSCWKPA 600
>sp|Q9SNB8|SCL30_ARATH Scarecrow-like protein 30 OS=Arabidopsis
thaliana GN=SCL30 PE=2 SV=1
Length = 583
Score = 50.8 bits (120), Expect = 3e-06
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +3
Query: 3 FVFDEDGKWILQGWKGRILYASSCWVPA 86
FV D D W+ QGWKGR+LYA SCW PA
Sbjct: 554 FVIDNDNHWMFQGWKGRVLYAVSCWKPA 581
>sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14 OS=Arabidopsis
thaliana GN=SCL14 PE=2 SV=2
Length = 769
Score = 50.1 bits (118), Expect = 4e-06
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3
Query: 3 FVFDEDGKWILQGWKGRILYASSCWVPA 86
F D++G W+LQGWKGRI+YASS WVP+
Sbjct: 740 FDVDQNGNWLLQGWKGRIVYASSLWVPS 767
>sp|P0C883|SCL33_ARATH Scarecrow-like protein 33 OS=Arabidopsis
thaliana GN=SCL33 PE=3 SV=1
Length = 694
Score = 46.2 bits (108), Expect = 6e-05
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 3 FVFDEDGKWILQGWKGRILYASSCWVP 83
F D+D W+LQGWKGRI+Y SS WVP
Sbjct: 667 FDVDQDCHWLLQGWKGRIVYGSSIWVP 693
>sp|O80933|SCL9_ARATH Scarecrow-like protein 9 OS=Arabidopsis
thaliana GN=SCL9 PE=2 SV=1
Length = 718
Score = 43.5 bits (101), Expect = 4e-04
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 3 FVFDEDGKWILQGWKGRILYASSCWVP 83
FV D+D +W+LQGWKGR + A S W P
Sbjct: 688 FVIDQDNRWLLQGWKGRTVMALSVWKP 714
