miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q6UX73|CP089_HUMAN UPF0764 protein C16orf89 OS=Homo sapiens
GN=C16orf89 PE=2 SV=2
Length = 402
Score = 55.8 bits (133), Expect = 8e-08
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 94 ESCFVAQAGVQWRNLGSLQPPPPRFKQFSCL 2
+S VAQAGVQWRNLGSLQP PP FKQFSCL
Sbjct: 319 DSRSVAQAGVQWRNLGSLQPLPPGFKQFSCL 349
>sp|Q8IV13|CCNJL_HUMAN Cyclin-J-like protein OS=Homo sapiens
GN=CCNJL PE=2 SV=3
Length = 435
Score = 51.2 bits (121), Expect = 2e-06
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -1
Query: 84 LSPRLECSGAILAHCNLHHPGSSNFPAS 1
LSPRL+CSG I AHCNLH PGSSN PAS
Sbjct: 99 LSPRLKCSGMISAHCNLHLPGSSNSPAS 126
>sp|Q8N8F4|YV027_HUMAN Uncharacterized protein FLJ39582 OS=Homo
sapiens PE=2 SV=2
Length = 165
Score = 50.1 bits (118), Expect = 4e-06
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = -3
Query: 100 KKESCFVAQAGVQWRNLGSLQPPPPRFKQFSCL 2
+ ES VAQAGVQWR+LGSLQ PPP F F CL
Sbjct: 70 RPESRSVAQAGVQWRDLGSLQTPPPGFTPFGCL 102
>sp|Q86U02|CN165_HUMAN Putative uncharacterized protein C14orf165
OS=Homo sapiens GN=C14orf165 PE=4 SV=1
Length = 117
Score = 50.1 bits (118), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = -3
Query: 91 SCFVAQAGVQWRNLGSLQPPPPRFKQFSCL 2
S FVAQ GV W NLGSLQP PP FK+FSCL
Sbjct: 54 SGFVAQTGVHWCNLGSLQPLPPGFKRFSCL 83
>sp|Q6ZRH3|YA014_HUMAN Uncharacterized protein FLJ46360 OS=Homo
sapiens PE=1 SV=1
Length = 153
Score = 49.7 bits (117), Expect = 6e-06
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -2
Query: 98 ERVLLCRPGWSAVAQSWLTATSTTQVQAIFLP 3
+R+ LCRPGWSAVA+S LTATS ++V+AI LP
Sbjct: 118 DRISLCRPGWSAVARSRLTATSASRVEAILLP 149
>sp|Q6ZWE1|CC066_HUMAN Putative uncharacterized protein C3orf66
OS=Homo sapiens GN=C3orf66 PE=5 SV=1
Length = 131
Score = 49.7 bits (117), Expect = 6e-06
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -3
Query: 94 ESCFVAQAGVQWRNLGSLQPPPPRFKQFSCL 2
ESC VAQAGVQW +LGSLQ PPRFK+FS L
Sbjct: 67 ESCSVAQAGVQWCDLGSLQRLPPRFKRFSHL 97
>sp|Q5T7P6|TMM78_HUMAN Transmembrane protein 78 OS=Homo sapiens
GN=TMEM78 PE=2 SV=1
Length = 136
Score = 49.3 bits (116), Expect = 8e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -1
Query: 99 RKSLALSPRLECSGAILAHCNLHHPGSSNFPAS 1
R+ LALSPRLEC GAI+ HC+L+ PGSS+ P S
Sbjct: 102 RQGLALSPRLECDGAIMIHCSLNIPGSSDPPTS 134
>sp|Q68CZ1|FTM_HUMAN Protein fantom OS=Homo sapiens GN=RPGRIP1L PE=1
SV=2
Length = 1315
Score = 49.3 bits (116), Expect = 8e-06
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -1
Query: 99 RKSLALSPRLECSGAILAHCNLHHPGSSNFPAS 1
++SLALSP L CS AI AHCN PGSS+FPAS
Sbjct: 1097 KQSLALSPGLGCSSAISAHCNFRLPGSSDFPAS 1129
>sp|Q8N9U9|CX018_HUMAN Putative uncharacterized protein CXorf18
OS=Homo sapiens GN=CXorf18 PE=5 SV=1
Length = 137
Score = 48.9 bits (115), Expect = 1e-05
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = -2
Query: 98 ERVLLCRPGWSAVAQSWLTATSTTQVQAIFLP 3
ERV L PGWSA+A+SWLTA+S ++VQAI LP
Sbjct: 102 ERVSLLSPGWSALARSWLTASSASRVQAILLP 133
>sp|Q8N7M2|ZN283_HUMAN Zinc finger protein 283 OS=Homo sapiens
GN=ZNF283 PE=2 SV=4
Length = 679
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = -3
Query: 94 ESCFVAQAGVQWRNLGSLQPPPPRFKQFSCL 2
ES VAQAGVQW +LGSLQ PPP F FSCL
Sbjct: 2 ESRSVAQAGVQWCDLGSLQAPPPGFTLFSCL 32
>sp|Q6NY19|KANK3_HUMAN KN motif and ankyrin repeat_field domain-containing
protein 3 OS=Homo sapiens GN=KANK3 PE=2 SV=1
Length = 840
Score = 47.8 bits (112), Expect = 2e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3
Query: 76 QAGVQWRNLGSLQPPPPRFKQFSCL 2
QAGVQ NL SLQPPPPRFK+FSCL
Sbjct: 794 QAGVQRHNLSSLQPPPPRFKKFSCL 818
>sp|P51957|NEK4_HUMAN Serine/threonine-protein kinase Nek4 OS=Homo
sapiens GN=NEK4 PE=1 SV=2
Length = 841
Score = 46.6 bits (109), Expect = 5e-05
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -1
Query: 96 KSLALSPRLECSGAILAHCNLHHPGSSNFPAS 1
+SLALSP+LECSG ILAH NL GSS+ PAS
Sbjct: 456 QSLALSPKLECSGTILAHSNLRLLGSSDSPAS 487
>sp|Q9BUA6|MYL10_HUMAN Myosin regulatory light chain 10 OS=Homo
sapiens GN=MYL10 PE=2 SV=2
Length = 226
Score = 45.4 bits (106), Expect = 1e-04
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -1
Query: 99 RKSLALSPRLECSGAILAHCNLHHPGSSNFPAS 1
++SLALSPRLE +G I AHCNL GSSN PAS
Sbjct: 56 KESLALSPRLERNGMISAHCNLCLTGSSNSPAS 88
>sp|Q92918|M4K1_HUMAN Mitogen-activated protein kinase kinase kinase
kinase 1 OS=Homo sapiens GN=MAP4K1 PE=1 SV=1
Length = 833
Score = 45.4 bits (106), Expect = 1e-04
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = -1
Query: 81 SPRLECSGAILAHCNLHHPGSSNFPAS 1
SPRLECSG I HCNL PGSSN PAS
Sbjct: 797 SPRLECSGTISPHCNLLLPGSSNSPAS 823
>sp|Q5H9K5|ZMAT1_HUMAN Zinc finger matrin-type protein 1 OS=Homo
sapiens GN=ZMAT1 PE=2 SV=1
Length = 638
Score = 45.1 bits (105), Expect = 1e-04
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -1
Query: 75 RLECSGAILAHCNLHHPGSSNFPAS 1
RLECSGAI AHC+LH PGSS+ PAS
Sbjct: 8 RLECSGAISAHCSLHLPGSSDSPAS 32
>sp|Q5TCQ9|MAGI3_HUMAN Membrane-associated guanylate kinase, WW and
PDZ domain-containing protein 3 OS=Homo sapiens GN=MAGI3
PE=1 SV=2
Length = 1506
Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -3
Query: 82 VAQAGVQWRNLGSLQPPPPRFKQFS 8
VAQAGVQW +LGSLQPPPP F +
Sbjct: 363 VAQAGVQWHDLGSLQPPPPGFNHLN 387
>sp|Q96NF6|CH049_HUMAN Putative uncharacterized protein C8orf49
OS=Homo sapiens GN=C8orf49 PE=2 SV=1
Length = 230
Score = 43.1 bits (100), Expect = 5e-04
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 6 QENCLNLGGGGCSEPRLRHCTPAWAT 83
++N LN G GC EPR RHCTPAW T
Sbjct: 29 EDNRLNPEGRGCGEPRSRHCTPAWTT 54
>sp|Q8N9N2|ASCC1_HUMAN Activating signal cointegrator 1 complex
subunit 1 OS=Homo sapiens GN=ASCC1 PE=1 SV=1
Length = 400
Score = 43.1 bits (100), Expect = 6e-04
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -1
Query: 96 KSLALSPRLECSGAILAHCNLHHPGSSNFPAS 1
KS AL PRLE + AI AHCNL PGSS+ PAS
Sbjct: 347 KSFALLPRLEYNDAISAHCNLCLPGSSDSPAS 378
>sp|Q96M98|PACRG_HUMAN Parkin coregulated gene protein OS=Homo
sapiens GN=PACRG PE=1 SV=2
Length = 296
Score = 42.7 bits (99), Expect = 7e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -1
Query: 78 PRLECSGAILAHCNLHHPGSSNFPAS 1
PRLECSGAI+A CNL H GSS+ P S
Sbjct: 210 PRLECSGAIMARCNLDHLGSSDPPTS 235
>sp|Q96MD7|CI085_HUMAN Uncharacterized protein C9orf85 OS=Homo
sapiens GN=C9orf85 PE=1 SV=1
Length = 179
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = -1
Query: 93 SLALSPRLECSGAILAHCNLHHPGSSNFPAS 1
SL L PRLECSG ILAH NL P SS+ PAS
Sbjct: 110 SLPLLPRLECSGRILAHHNLRLPCSSDSPAS 140
