miRNEST 2.0, an integrative microRNA resource :: BLAST
>sp|Q9LSS7|RUBP1_ARATH NEDD8-specific protease 1 OS=Arabidopsis
thaliana GN=NEDP1 PE=2 SV=1
Length = 226
Score = 65.9 bits (159), Expect = 8e-11
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Frame = +3
Query: 30 ILLVAPSVSFVLAET-DKEGAEMIMQKMGLSGKNIIIFPMN-------GDGGSHWSTLVY 185
I L+ PS++F ++ D E + M+ + L K+++I P+N +GG HWS LVY
Sbjct: 53 ISLIPPSIAFWISNCPDTEYLKDFMKPLNLRDKDLLILPVNDNSNVEVAEGGLHWSLLVY 112
Query: 186 FRSMSTFVHHDSMRGQNNDCATRLYEVASAFL 281
++ +TFVHHDS G N A +L++ S F+
Sbjct: 113 YKEANTFVHHDSYMGVNRWSAKQLFKAVSPFV 144
>sp|Q54XR2|SENP8_DICDI Probable sentrin-specific protease 8
OS=Dictyostelium discoideum GN=senp8 PE=3 SV=1
Length = 243
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Frame = +3
Query: 24 DDILLVAPSVSFVLA--ETDKEGAEMIMQKMGLSGKNIIIFPMNGD-------GGSHWST 176
+ +LL++PSV F + E+++E M Q + L K +I FP+ + GG+HWS
Sbjct: 53 NQVLLLSPSVVFCCSFVESEQEIQLMFEQPLSLKTKEVIFFPLTNNRDPNVIGGGTHWSL 112
Query: 177 LVYFRSMSTFVHHDSMRGQNNDCA 248
L++ +S++ F+++DS+ N+ A
Sbjct: 113 LIFIKSLNKFIYYDSINSFNSSDA 136
>sp|Q96LD8|SENP8_HUMAN Sentrin-specific protease 8 OS=Homo sapiens
GN=SENP8 PE=1 SV=1
Length = 212
Score = 49.7 bits (117), Expect = 6e-06
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Frame = +3
Query: 24 DDILLVAPSVS-FVLAETDKEGAEMIMQKMGLSGKNIIIFPMNGD-----GGSHWSTLVY 185
D + ++P V+ F+ ++ M ++ + L K ++ +N + GG+HWS LVY
Sbjct: 49 DHVSFISPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVY 108
Query: 186 FRSMSTFVHHDSMRGQNNDCATRLYEVASAFL 281
+ ++F H+DS N+ A ++ E AFL
Sbjct: 109 LQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFL 140
>sp|Q5FVJ8|SENP8_RAT Sentrin-specific protease 8 OS=Rattus
norvegicus GN=Senp8 PE=2 SV=1
Length = 217
Score = 48.9 bits (115), Expect = 1e-05
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Frame = +3
Query: 24 DDILLVAPSVS-FVLAETDKEGAEMIMQKMGLSGKNIIIFPMNGD-----GGSHWSTLVY 185
D + ++P V+ F+ + M ++ + L K ++ +N + GG+HWS LVY
Sbjct: 49 DHVCFISPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLVY 108
Query: 186 FRSMSTFVHHDSMRGQNNDCATRLYEVASAFL 281
+ ++F H+DS N+ A ++ E AFL
Sbjct: 109 LQDKNSFFHYDSHSRSNSIHAKQVAEKLKAFL 140
>sp|Q9D2Z4|SENP8_MOUSE Sentrin-specific protease 8 OS=Mus musculus
GN=Senp8 PE=1 SV=2
Length = 221
Score = 48.9 bits (115), Expect = 1e-05
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Frame = +3
Query: 24 DDILLVAPSVS-FVLAETDKEGAEMIMQKMGLSGKNIIIFPMNGD-----GGSHWSTLVY 185
D + ++P V+ F+ + M ++ + L K ++ +N + GG+HWS LVY
Sbjct: 49 DHVCFISPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLVY 108
Query: 186 FRSMSTFVHHDSMRGQNNDCATRLYEVASAFL 281
+ ++F H+DS N+ A ++ E AFL
Sbjct: 109 LQDKNSFFHYDSHSRSNSIHAKQVAEKLKAFL 140
