miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P19866|G3PA_SPIOL Glyceraldehyde-3-phosphate dehydrogenase A,
chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2
Length = 401
Score = 49.3 bits (116), Expect = 8e-06
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAVALVLPNLKGK
Sbjct: 256 ASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGK 292
>sp|P09672|G3PA_SINAL Glyceraldehyde-3-phosphate dehydrogenase A,
chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2
SV=1
Length = 233
Score = 49.3 bits (116), Expect = 8e-06
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAVALVLPNLKGK
Sbjct: 88 ASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGK 124
>sp|P25856|G3PA_ARATH Glyceraldehyde-3-phosphate dehydrogenase A,
chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3
Length = 396
Score = 49.3 bits (116), Expect = 8e-06
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAVALVLPNLKGK
Sbjct: 251 ASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGK 287
>sp|P09315|G3PA_MAIZE Glyceraldehyde-3-phosphate dehydrogenase A,
chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1
Length = 403
Score = 48.1 bits (113), Expect = 2e-05
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAV+LVLPNLKGK
Sbjct: 258 ASHRDLRRARAAALNIVPTSTGAAKAVSLVLPNLKGK 294
>sp|P12858|G3PA_PEA Glyceraldehyde-3-phosphate dehydrogenase A,
chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2
Length = 405
Score = 47.0 bits (110), Expect = 4e-05
Identities = 25/37 (67%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAVALVLP LKGK
Sbjct: 260 ASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGK 296
>sp|P58554|G3P2_NOSS1 Glyceraldehyde-3-phosphate dehydrogenase 2
OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=gap2 PE=1
SV=1
Length = 337
Score = 46.2 bits (108), Expect = 6e-05
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAVALV+P LKGK
Sbjct: 192 ASHRDLRRARAAAINIVPTSTGAAKAVALVIPELKGK 228
>sp|P34917|G3P2_ANAVT Glyceraldehyde-3-phosphate dehydrogenase 2
OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=gap2 PE=3 SV=2
Length = 337
Score = 46.2 bits (108), Expect = 6e-05
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAVALV+P LKGK
Sbjct: 192 ASHRDLRRARAAAINIVPTSTGAAKAVALVIPELKGK 228
>sp|P09044|G3PB_TOBAC Glyceraldehyde-3-phosphate dehydrogenase B,
chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB
PE=2 SV=1
Length = 438
Score = 45.8 bits (107), Expect = 8e-05
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAV+LVLP LKGK
Sbjct: 246 ASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGK 282
>sp|P12860|G3PB_SPIOL Glyceraldehyde-3-phosphate dehydrogenase B,
chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1
Length = 451
Score = 45.8 bits (107), Expect = 8e-05
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAV+LVLP LKGK
Sbjct: 276 ASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGK 312
>sp|P12859|G3PB_PEA Glyceraldehyde-3-phosphate dehydrogenase B,
chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2
Length = 451
Score = 45.8 bits (107), Expect = 8e-05
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAV+LVLP LKGK
Sbjct: 277 ASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGK 313
>sp|P25857|G3PB_ARATH Glyceraldehyde-3-phosphate dehydrogenase B,
chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2
Length = 447
Score = 45.8 bits (107), Expect = 8e-05
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAV+LVLP LKGK
Sbjct: 273 ASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGK 309
>sp|Q8VXQ9|G3PA_SCEVA Glyceraldehyde-3-phosphate dehydrogenase A,
chloroplastic (Fragment) OS=Scenedesmus vacuolatus
GN=GapA PE=2 SV=1
Length = 314
Score = 45.8 bits (107), Expect = 8e-05
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPT+TGAAKAVALVLP LKGK
Sbjct: 186 ASHRDLRRARAAALNIVPTTTGAAKAVALVLPKLKGK 222
>sp|Q01651|G3P_CORGL Glyceraldehyde-3-phosphate dehydrogenase
OS=Corynebacterium glutamicum GN=gap PE=1 SV=2
Length = 334
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
NIVPTSTGAAKAVALVLP LKGK
Sbjct: 205 NIVPTSTGAAKAVALVLPELKGK 227
>sp|P50362|G3PA_CHLRE Glyceraldehyde-3-phosphate dehydrogenase A,
chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1
SV=1
Length = 374
Score = 45.1 bits (105), Expect = 1e-04
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPT+TGAAKAV+LVLP+LKGK
Sbjct: 228 ASHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGK 264
>sp|P94915|G3P_MYCAV Glyceraldehyde-3-phosphate dehydrogenase
OS=Mycobacterium avium GN=gapA PE=3 SV=3
Length = 339
Score = 44.7 bits (104), Expect = 2e-04
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
NIVPTSTGAAKA+ LV+PNLKGK
Sbjct: 210 NIVPTSTGAAKAIGLVMPNLKGK 232
>sp|P80505|G3P2_SYNY3 Glyceraldehyde-3-phosphate dehydrogenase 2
OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 /
N-1) GN=gap2 PE=1 SV=3
Length = 337
Score = 44.7 bits (104), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
ASH NIVPTSTGAAKAVALV+P L+GK
Sbjct: 192 ASHRDLRRARAAAVNIVPTSTGAAKAVALVIPELQGK 228
>sp|P23722|G3P_BACMD Glyceraldehyde-3-phosphate dehydrogenase
OS=Bacillus megaterium (strain DSM 319) GN=gap PE=3 SV=3
Length = 335
Score = 43.5 bits (101), Expect = 4e-04
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
NI+PTSTGAAKAV+LVLP LKGK
Sbjct: 204 NIIPTSTGAAKAVSLVLPELKGK 226
>sp|P34919|G3PA_CHOCR Glyceraldehyde-3-phosphate dehydrogenase,
chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1
Length = 414
Score = 43.5 bits (101), Expect = 4e-04
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = +2
Query: 2 ASHXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGK 112
A H NIVPT+TGAAKAVALV+P+LKGK
Sbjct: 269 AGHRDLRRARSAALNIVPTTTGAAKAVALVVPSLKGK 305
>sp|P09124|G3P1_BACSU Glyceraldehyde-3-phosphate dehydrogenase 1
OS=Bacillus subtilis GN=gapA PE=1 SV=2
Length = 335
Score = 43.5 bits (101), Expect = 4e-04
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
NI+PTSTGAAKAV+LVLP LKGK
Sbjct: 204 NIIPTSTGAAKAVSLVLPELKGK 226
>sp|Q4MQ58|G3P1_BACCE Glyceraldehyde-3-phosphate dehydrogenase 1
OS=Bacillus cereus GN=gap1 PE=1 SV=3
Length = 334
Score = 43.5 bits (101), Expect = 4e-04
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
N++PTSTGAAKAVALVLP LKGK
Sbjct: 203 NMIPTSTGAAKAVALVLPELKGK 225
>sp|A0QWW2|G3P_MYCS2 Glyceraldehyde-3-phosphate dehydrogenase
OS=Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155) GN=gapA PE=1 SV=1
Length = 340
Score = 43.1 bits (100), Expect = 5e-04
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
NIVPTSTGAAKA+ LVLP LKGK
Sbjct: 211 NIVPTSTGAAKAIGLVLPELKGK 233
>sp|P80506|G3P1_NOSS1 Glyceraldehyde-3-phosphate dehydrogenase 1
OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=gap1 PE=1
SV=3
Length = 343
Score = 43.1 bits (100), Expect = 5e-04
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
NI+P+STGAAKAVALVLP LKGK
Sbjct: 208 NIIPSSTGAAKAVALVLPELKGK 230
>sp|P34916|G3P1_ANAVT Glyceraldehyde-3-phosphate dehydrogenase 1
OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=gap1 PE=3 SV=4
Length = 343
Score = 43.1 bits (100), Expect = 5e-04
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
NI+P+STGAAKAVALVLP LKGK
Sbjct: 208 NIIPSSTGAAKAVALVLPELKGK 230
>sp|P64178|G3P_MYCTU Glyceraldehyde-3-phosphate dehydrogenase
OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1
Length = 339
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
NIVPTSTGAAKA+ LV+P LKGK
Sbjct: 210 NIVPTSTGAAKAIGLVMPQLKGK 232
>sp|P64179|G3P_MYCBO Glyceraldehyde-3-phosphate dehydrogenase
OS=Mycobacterium bovis GN=gap PE=3 SV=1
Length = 339
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2
Query: 44 NIVPTSTGAAKAVALVLPNLKGK 112
NIVPTSTGAAKA+ LV+P LKGK
Sbjct: 210 NIVPTSTGAAKAIGLVMPQLKGK 232
