miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q52QI2|RTL1_BOVIN Retrotransposon-like protein 1 OS=Bos taurus
GN=RTL1 PE=2 SV=2
Length = 1331
Score = 84.7 bits (208), Expect = 2e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = -3
Query: 122 AAFMVWCRYLENTEEPIMILLNKEDLASLNNDRLTVLLPG 3
AAFMVWCRYLENTEEPIMILLNKEDLASLNNDRLTVLLPG
Sbjct: 915 AAFMVWCRYLENTEEPIMILLNKEDLASLNNDRLTVLLPG 954
>sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus musculus
GN=Rtl1 PE=2 SV=1
Length = 1744
Score = 82.4 bits (202), Expect = 8e-16
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3
Query: 122 AAFMVWCRYLENTEEPIMILLNKEDLASLNNDRLTVLLPG 3
AAFMVWCRYLENTEEPIMILLN EDLASLNNDRLTVLLPG
Sbjct: 1190 AAFMVWCRYLENTEEPIMILLNTEDLASLNNDRLTVLLPG 1229
>sp|A6NKG5|RTL1_HUMAN Retrotransposon-like protein 1 OS=Homo sapiens
GN=RTL1 PE=2 SV=2
Length = 1359
Score = 82.4 bits (202), Expect = 8e-16
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3
Query: 122 AAFMVWCRYLENTEEPIMILLNKEDLASLNNDRLTVLLPG 3
AAFMVWCRYLENTEEPIMILLN EDLASLNNDRLTVLLPG
Sbjct: 930 AAFMVWCRYLENTEEPIMILLNTEDLASLNNDRLTVLLPG 969
