miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus
          GN=SMARCA4 PE=2 SV=1
          Length = 1606

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +2

Query: 2  SPGPSPGSAHSIMGPSPGP 58
          SPGPSPGSAHSIMGPSPGP
Sbjct: 31 SPGPSPGSAHSIMGPSPGP 49




>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus
          norvegicus GN=Smarca4 PE=1 SV=1
          Length = 1613

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +2

Query: 2  SPGPSPGSAHSIMGPSPGP 58
          SPGPSPGSAHS+MGPSPGP
Sbjct: 31 SPGPSPGSAHSMMGPSPGP 49




>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus
          musculus GN=Smarca4 PE=1 SV=1
          Length = 1613

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +2

Query: 2  SPGPSPGSAHSIMGPSPGP 58
          SPGPSPGSAHS+MGPSPGP
Sbjct: 31 SPGPSPGSAHSMMGPSPGP 49




>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo
          sapiens GN=SMARCA4 PE=1 SV=2
          Length = 1647

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +2

Query: 2  SPGPSPGSAHSIMGPSPGP 58
          SPGPSPGSAHS+MGPSPGP
Sbjct: 31 SPGPSPGSAHSMMGPSPGP 49