miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q00961|NMDE3_RAT Glutamate [NMDA] receptor subunit epsilon-3
OS=Rattus norvegicus GN=Grin2c PE=1 SV=1
Length = 1237
Score = 62.8 bits (151), Expect = 7e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNY 5
+FQ+PQ+ YPPFRFGTVPNGSTERNIRSNY
Sbjct: 667 KFQRPQDQYPPFRFGTVPNGSTERNIRSNY 696
>sp|Q01098|NMDE3_MOUSE Glutamate [NMDA] receptor subunit epsilon-3
OS=Mus musculus GN=Grin2c PE=2 SV=2
Length = 1239
Score = 62.8 bits (151), Expect = 7e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNY 5
+FQ+PQ+ YPPFRFGTVPNGSTERNIRSNY
Sbjct: 667 KFQRPQDQYPPFRFGTVPNGSTERNIRSNY 696
>sp|Q14957|NMDE3_HUMAN Glutamate [NMDA] receptor subunit epsilon-3
OS=Homo sapiens GN=GRIN2C PE=2 SV=3
Length = 1233
Score = 62.8 bits (151), Expect = 7e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNY 5
+FQ+PQ+ YPPFRFGTVPNGSTERNIRSNY
Sbjct: 667 KFQRPQDQYPPFRFGTVPNGSTERNIRSNY 696
>sp|Q62645|NMDE4_RAT Glutamate [NMDA] receptor subunit epsilon-4
OS=Rattus norvegicus GN=Grin2d PE=1 SV=2
Length = 1323
Score = 62.0 bits (149), Expect = 1e-09
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNYP 2
+FQ+PQE YPP +FGTVPNGSTE+NIRSNYP
Sbjct: 694 KFQRPQEQYPPLKFGTVPNGSTEKNIRSNYP 724
>sp|Q03391|NMDE4_MOUSE Glutamate [NMDA] receptor subunit epsilon-4
OS=Mus musculus GN=Grin2d PE=1 SV=2
Length = 1323
Score = 62.0 bits (149), Expect = 1e-09
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNYP 2
+FQ+PQE YPP +FGTVPNGSTE+NIRSNYP
Sbjct: 694 KFQRPQEQYPPLKFGTVPNGSTEKNIRSNYP 724
>sp|O15399|NMDE4_HUMAN Glutamate [NMDA] receptor subunit epsilon-4
OS=Homo sapiens GN=GRIN2D PE=1 SV=2
Length = 1336
Score = 62.0 bits (149), Expect = 1e-09
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNYP 2
+FQ+PQE YPP +FGTVPNGSTE+NIRSNYP
Sbjct: 697 KFQRPQEQYPPLKFGTVPNGSTEKNIRSNYP 727
>sp|Q00959|NMDE1_RAT Glutamate [NMDA] receptor subunit epsilon-1
OS=Rattus norvegicus GN=Grin2a PE=1 SV=2
Length = 1464
Score = 59.7 bits (143), Expect = 6e-09
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNYP 2
+FQ+P ++ PPFRFGTVPNGSTERNIR+NYP
Sbjct: 669 KFQRPHDYSPPFRFGTVPNGSTERNIRNNYP 699
>sp|Q5IS45|NMDE1_PANTR Glutamate [NMDA] receptor subunit epsilon-1
OS=Pan troglodytes GN=GRIN2A PE=2 SV=1
Length = 1464
Score = 59.7 bits (143), Expect = 6e-09
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNYP 2
+FQ+P ++ PPFRFGTVPNGSTERNIR+NYP
Sbjct: 669 KFQRPHDYSPPFRFGTVPNGSTERNIRNNYP 699
>sp|P35436|NMDE1_MOUSE Glutamate [NMDA] receptor subunit epsilon-1
OS=Mus musculus GN=Grin2a PE=1 SV=2
Length = 1464
Score = 59.7 bits (143), Expect = 6e-09
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNYP 2
+FQ+P ++ PPFRFGTVPNGSTERNIR+NYP
Sbjct: 669 KFQRPHDYSPPFRFGTVPNGSTERNIRNNYP 699
>sp|Q12879|NMDE1_HUMAN Glutamate [NMDA] receptor subunit epsilon-1
OS=Homo sapiens GN=GRIN2A PE=1 SV=1
Length = 1464
Score = 59.7 bits (143), Expect = 6e-09
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNYP 2
+FQ+P ++ PPFRFGTVPNGSTERNIR+NYP
Sbjct: 669 KFQRPHDYSPPFRFGTVPNGSTERNIRNNYP 699
>sp|Q00960|NMDE2_RAT Glutamate [NMDA] receptor subunit epsilon-2
OS=Rattus norvegicus GN=Grin2b PE=1 SV=1
Length = 1482
Score = 55.8 bits (133), Expect = 8e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNY 5
+FQ+P + PPFRFGTVPNGSTERNIR+NY
Sbjct: 670 KFQRPNDFSPPFRFGTVPNGSTERNIRNNY 699
>sp|Q01097|NMDE2_MOUSE Glutamate [NMDA] receptor subunit epsilon-2
OS=Mus musculus GN=Grin2b PE=1 SV=3
Length = 1482
Score = 55.8 bits (133), Expect = 8e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNY 5
+FQ+P + PPFRFGTVPNGSTERNIR+NY
Sbjct: 670 KFQRPNDFSPPFRFGTVPNGSTERNIRNNY 699
>sp|Q13224|NMDE2_HUMAN Glutamate [NMDA] receptor subunit epsilon-2
OS=Homo sapiens GN=GRIN2B PE=1 SV=3
Length = 1484
Score = 55.8 bits (133), Expect = 8e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNY 5
+FQ+P + PPFRFGTVPNGSTERNIR+NY
Sbjct: 670 KFQRPNDFSPPFRFGTVPNGSTERNIRNNY 699
>sp|Q5R1P3|NMDE2_CANFA Glutamate [NMDA] receptor subunit epsilon-2
OS=Canis familiaris GN=GRIN2B PE=2 SV=1
Length = 1485
Score = 55.8 bits (133), Expect = 8e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -2
Query: 94 QFQKPQEHYPPFRFGTVPNGSTERNIRSNY 5
+FQ+P + PPFRFGTVPNGSTERNIR+NY
Sbjct: 670 KFQRPNDFSPPFRFGTVPNGSTERNIRNNY 699
