miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza
sativa subsp. japonica GN=MADS57 PE=2 SV=2
Length = 241
Score = 62.8 bits (151), Expect = 7e-10
Identities = 36/58 (62%), Positives = 38/58 (65%)
Frame = -1
Query: 234 EAASLRQQLHNLQESHKYDLAMDSKIM*ETLFQCCRQLMGEELSGLGVRDLQSLENQI 61
EAASLRQQLHNLQESHK QLMGEELSGLGVRDLQ LEN++
Sbjct: 91 EAASLRQQLHNLQESHK-------------------QLMGEELSGLGVRDLQGLENRL 129
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza
sativa subsp. japonica GN=MADS27 PE=2 SV=2
Length = 240
Score = 58.5 bits (140), Expect = 1e-08
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = -1
Query: 234 EAASLRQQLHNLQESHKYDLAMDSKIM*ETLFQCCRQLMGEELSGLGVRDLQSLENQI 61
EAASLRQQLHNLQE+H RQLMGE+LSGL V++LQSLENQ+
Sbjct: 92 EAASLRQQLHNLQENH-------------------RQLMGEDLSGLNVKELQSLENQL 130
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza
sativa subsp. japonica GN=MADS23 PE=2 SV=1
Length = 159
Score = 50.8 bits (120), Expect = 3e-06
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = -1
Query: 234 EAASLRQQLHNLQESHKYDLAMDSKIM*ETLFQCCRQLMGEELSGLGVRDLQSLENQI 61
EAASLRQQLHNLQE H RQL+G++LSGL V DLQ+LE+++
Sbjct: 92 EAASLRQQLHNLQEYH-------------------RQLLGQQLSGLDVEDLQNLESKL 130
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21
OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1
Length = 228
Score = 48.1 bits (113), Expect = 2e-05
Identities = 28/58 (48%), Positives = 34/58 (58%)
Frame = -1
Query: 234 EAASLRQQLHNLQESHKYDLAMDSKIM*ETLFQCCRQLMGEELSGLGVRDLQSLENQI 61
EAA LRQ+LH LQE+H RQ+MGE+L+GL V +L SLENQI
Sbjct: 92 EAAVLRQELHALQENH-------------------RQMMGEQLNGLSVNELNSLENQI 130
