miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana
glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 44.3 bits (103), Expect = 2e-04
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +1
Query: 4 SRDEHILKNYGVDEVYKVPLLDWTNSLQLLCRKAFKLDHILNSYEGLVNGILHYANGLPL 183
+RD+H+++ D +Y+V L S+QL + AF + ++E L +++YA GLPL
Sbjct: 330 TRDKHLIEKN--DIIYEVTALPDHESIQLFKQHAFGKEVPNENFEKLSLEVVNYAKGLPL 387
Query: 184 AIKVLGSFL 210
A+KV GS L
Sbjct: 388 ALKVWGSLL 396
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1
OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 43.9 bits (102), Expect = 3e-04
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1
Query: 1 ISRDEHILKNYGVDEVYKVPLLDWTNSLQLLCRKAFKLDHILNSYEGLVNGILHYANGLP 180
I++D +LK + +D +Y+V +L +LCR AF D + ++ L + A LP
Sbjct: 319 ITQDRQLLKAHEIDLIYEVEFPSEHLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGNLP 378
Query: 181 LAIKVLGSFL 210
L + VLGS L
Sbjct: 379 LGLSVLGSSL 388
