miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9XPS8|RPOC1_WHEAT DNA-directed RNA polymerase subunit beta'
OS=Triticum aestivum GN=rpoC1 PE=3 SV=1
Length = 683
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|A1E9R5|RPOC1_SORBI DNA-directed RNA polymerase subunit beta'
OS=Sorghum bicolor GN=rpoC1 PE=3 SV=1
Length = 683
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|Q6ENX2|RPOC1_SACOF DNA-directed RNA polymerase subunit beta'
OS=Saccharum officinarum GN=rpoC1 PE=3 SV=1
Length = 683
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|Q6L3A6|RPOC1_SACHY DNA-directed RNA polymerase subunit beta'
OS=Saccharum hybrid GN=rpoC1 PE=3 SV=1
Length = 683
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|P0C506|RPOC1_ORYSJ DNA-directed RNA polymerase subunit beta'
OS=Oryza sativa subsp. japonica GN=rpoC1 PE=3 SV=1
Length = 682
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|P0C505|RPOC1_ORYSI DNA-directed RNA polymerase subunit beta'
OS=Oryza sativa subsp. indica GN=rpoC1 PE=3 SV=1
Length = 682
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|P0C504|RPOC1_ORYSA DNA-directed RNA polymerase subunit beta'
OS=Oryza sativa GN=rpoC1 PE=3 SV=1
Length = 682
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|Q6ENI3|RPOC1_ORYNI DNA-directed RNA polymerase subunit beta'
OS=Oryza nivara GN=rpoC1 PE=3 SV=1
Length = 682
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|P16024|RPOC1_MAIZE DNA-directed RNA polymerase subunit beta'
OS=Zea mays GN=rpoC1 PE=3 SV=1
Length = 683
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|A8Y9G1|RPOC1_LOLPR DNA-directed RNA polymerase subunit beta'
OS=Lolium perenne GN=rpoC1 PE=3 SV=1
Length = 676
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|A1E9I2|RPOC1_HORVU DNA-directed RNA polymerase subunit beta'
OS=Hordeum vulgare GN=rpoC1 PE=3 SV=1
Length = 682
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|B3TN43|RPOC1_BRADI DNA-directed RNA polymerase subunit beta'
OS=Brachypodium distachyon GN=rpoC1 PE=3 SV=1
Length = 682
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|A1E9Z9|RPOC1_AGRST DNA-directed RNA polymerase subunit beta'
OS=Agrostis stolonifera GN=rpoC1 PE=3 SV=1
Length = 682
Score = 95.1 bits (235), Expect = 1e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWEDRKR IRKVFLIRRMQLAKHFIQTNVEPEWMV CLLPVLPP+L
Sbjct: 230 DEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPEL 276
>sp|Q09G55|RPOC1_PLAOC DNA-directed RNA polymerase subunit beta'
OS=Platanus occidentalis GN=rpoC1 PE=3 SV=1
Length = 682
Score = 81.6 bits (200), Expect = 1e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TNVEPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPEWMVLCLLPVLPPEL 276
>sp|A9L987|RPOC1_LEMMI DNA-directed RNA polymerase subunit beta'
OS=Lemna minor GN=rpoC1 PE=3 SV=1
Length = 690
Score = 81.6 bits (200), Expect = 1e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TNVEPEWMV CLLPVLPP+L
Sbjct: 237 NEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWMVLCLLPVLPPEL 283
>sp|Q0ZJ29|RPOC1_VITVI DNA-directed RNA polymerase subunit beta'
OS=Vitis vinifera GN=rpoC1 PE=3 SV=1
Length = 682
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|P46819|RPOC1_SINAL DNA-directed RNA polymerase subunit beta'
OS=Sinapis alba GN=rpoC1 PE=1 SV=2
Length = 688
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 238 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 284
>sp|Q589B9|RPOC1_SILLA DNA-directed RNA polymerase subunit beta'
OS=Silene latifolia GN=rpoC1 PE=3 SV=1
Length = 687
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 233 NEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 279
>sp|Q68S15|RPOC1_PANGI DNA-directed RNA polymerase subunit beta'
OS=Panax ginseng GN=rpoC1 PE=3 SV=2
Length = 682
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4QJS4|RPOC1_OLIPU DNA-directed RNA polymerase subunit beta'
OS=Olimarabidopsis pumila GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4QLS4|RPOC1_NASOF DNA-directed RNA polymerase subunit beta'
OS=Nasturtium officinale GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q09X26|RPOC1_MORIN DNA-directed RNA polymerase subunit beta'
OS=Morus indica GN=rpoC1 PE=3 SV=1
Length = 684
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q9BBS8|RPOC1_LOTJA DNA-directed RNA polymerase subunit beta'
OS=Lotus japonicus GN=rpoC1 PE=3 SV=1
Length = 682
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 232 NEWEDRKVGRRKNFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 278
>sp|A4QLI5|RPOC1_LOBMA DNA-directed RNA polymerase subunit beta'
OS=Lobularia maritima GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4QL97|RPOC1_LEPVR DNA-directed RNA polymerase subunit beta'
OS=Lepidium virginicum GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q2L8Z4|RPOC1_GOSHI DNA-directed RNA polymerase subunit beta'
OS=Gossypium hirsutum GN=rpoC1 PE=3 SV=1
Length = 685
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A0ZZ26|RPOC1_GOSBA DNA-directed RNA polymerase subunit beta'
OS=Gossypium barbadense GN=rpoC1 PE=3 SV=2
Length = 694
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|B2XWP0|RPOC1_FAGEA DNA-directed RNA polymerase subunit beta'
OS=Fagopyrum esculentum subsp. ancestrale GN=rpoC1 PE=3
SV=1
Length = 676
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 226 NEWEDRKVRRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 272
>sp|A4QL10|RPOC1_DRANE DNA-directed RNA polymerase subunit beta'
OS=Draba nemorosa GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q4VZP2|RPOC1_CUCSA DNA-directed RNA polymerase subunit beta'
OS=Cucumis sativus GN=rpoC1 PE=3 SV=3
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4QKS2|RPOC1_CRUWA DNA-directed RNA polymerase subunit beta'
OS=Crucihimalaya wallichii GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|B1A926|RPOC1_CARPA DNA-directed RNA polymerase subunit beta'
OS=Carica papaya GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4QKI3|RPOC1_CAPBU DNA-directed RNA polymerase subunit beta'
OS=Capsella bursa-pastoris GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4QK96|RPOC1_BARVE DNA-directed RNA polymerase subunit beta'
OS=Barbarea verna GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|P56763|RPOC1_ARATH DNA-directed RNA polymerase subunit beta'
OS=Arabidopsis thaliana GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4QJJ0|RPOC1_AETGR DNA-directed RNA polymerase subunit beta'
OS=Aethionema grandiflora GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4QJA6|RPOC1_AETCO DNA-directed RNA polymerase subunit beta'
OS=Aethionema cordifolium GN=rpoC1 PE=3 SV=1
Length = 680
Score = 81.3 bits (199), Expect = 2e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4QK09|RPOC1_ARAHI DNA-directed RNA polymerase subunit beta'
OS=Arabis hirsuta GN=rpoC1 PE=3 SV=1
Length = 680
Score = 80.9 bits (198), Expect = 2e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPEWM+ CLLPVLPP+L
Sbjct: 230 NEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMILCLLPVLPPEL 276
>sp|A7Y3B6|RPOC1_IPOPU DNA-directed RNA polymerase subunit beta'
OS=Ipomoea purpurea GN=rpoC1 PE=3 SV=1
Length = 687
Score = 80.5 bits (197), Expect = 3e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHF++TN+EPEWMV CLLPVLPP+L
Sbjct: 237 NEWEDRKVGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPVLPPEL 283
>sp|Q49L07|RPOC1_EUCGG DNA-directed RNA polymerase subunit beta'
OS=Eucalyptus globulus subsp. globulus GN=rpoC1 PE=3
SV=2
Length = 682
Score = 80.5 bits (197), Expect = 3e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHF++TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPVLPPEL 276
>sp|B0Z5C8|RPOC1_OENPA DNA-directed RNA polymerase subunit beta'
OS=Oenothera parviflora GN=rpoC1 PE=3 SV=1
Length = 679
Score = 80.1 bits (196), Expect = 4e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKQFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|B0Z544|RPOC1_OENGL DNA-directed RNA polymerase subunit beta'
OS=Oenothera glazioviana GN=rpoC1 PE=3 SV=1
Length = 679
Score = 80.1 bits (196), Expect = 4e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKQFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q9MTM4|RPOC1_OENEH DNA-directed RNA polymerase subunit beta'
OS=Oenothera elata subsp. hookeri GN=rpoC1 PE=3 SV=2
Length = 679
Score = 80.1 bits (196), Expect = 4e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKQFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|B0Z4W0|RPOC1_OENBI DNA-directed RNA polymerase subunit beta'
OS=Oenothera biennis GN=rpoC1 PE=3 SV=1
Length = 679
Score = 80.1 bits (196), Expect = 4e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKQFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|B0Z4M6|RPOC1_OENAR DNA-directed RNA polymerase subunit beta'
OS=Oenothera argillicola GN=rpoC1 PE=3 SV=1
Length = 679
Score = 80.1 bits (196), Expect = 4e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKQFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|P12116|RPOC1_TOBAC DNA-directed RNA polymerase subunit beta'
OS=Nicotiana tabacum GN=rpoC1 PE=3 SV=1
Length = 680
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 229 NEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 275
>sp|P11705|RPOC1_SPIOL DNA-directed RNA polymerase subunit beta'
OS=Spinacia oleracea GN=rpoC1 PE=3 SV=1
Length = 677
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+L KHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRMELVKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q2MIA9|RPOC1_SOLLC DNA-directed RNA polymerase subunit beta'
OS=Solanum lycopersicum GN=rpoC1 PE=3 SV=2
Length = 681
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q2MIJ6|RPOC1_SOLBU DNA-directed RNA polymerase subunit beta'
OS=Solanum bulbocastanum GN=rpoC1 PE=3 SV=2
Length = 681
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4GYP9|RPOC1_POPTR DNA-directed RNA polymerase subunit beta'
OS=Populus trichocarpa GN=rpoC1 PE=3 SV=1
Length = 689
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 237 NEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 283
>sp|Q14FG6|RPOC1_POPAL DNA-directed RNA polymerase subunit beta'
OS=Populus alba GN=rpoC1 PE=3 SV=1
Length = 682
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|A4GGA6|RPOC1_PHAVU DNA-directed RNA polymerase subunit beta'
OS=Phaseolus vulgaris GN=rpoC1 PE=3 SV=1
Length = 684
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 232 NEWEDRKVGRRKNFLVRRIELAKHFIRTNIEPEWMVLCLLPVLPPEL 278
>sp|A1XFU6|RPOC1_NUPAD DNA-directed RNA polymerase subunit beta'
OS=Nuphar advena GN=rpoC1 PE=3 SV=1
Length = 693
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++WEDRK RK FL+RRM+LAKHF++TNVEPEWMV CLLPVLPP+L
Sbjct: 237 NDWEDRKIGRRKDFLVRRMELAKHFLRTNVEPEWMVLCLLPVLPPEL 283
>sp|Q33C47|RPOC1_NICTO DNA-directed RNA polymerase subunit beta'
OS=Nicotiana tomentosiformis GN=rpoC1 PE=3 SV=2
Length = 681
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q3C1G8|RPOC1_NICSY DNA-directed RNA polymerase subunit beta'
OS=Nicotiana sylvestris GN=rpoC1 PE=3 SV=2
Length = 681
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|B1NWE1|RPOC1_MANES DNA-directed RNA polymerase subunit beta'
OS=Manihot esculenta GN=rpoC1 PE=3 SV=1
Length = 680
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q8S8Y0|RPOC1_ATRBE DNA-directed RNA polymerase subunit beta'
OS=Atropa belladonna GN=rpoC1 PE=3 SV=2
Length = 681
Score = 79.7 bits (195), Expect = 5e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPEL 276
>sp|B2LMI1|RPOC1_GUIAB DNA-directed RNA polymerase subunit beta'
OS=Guizotia abyssinica GN=rpoC1 PE=3 SV=1
Length = 696
Score = 79.3 bits (194), Expect = 7e-15
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EP+WMV CLLPVLPP+L
Sbjct: 237 NEWEDRKVGRRKDFLLRRMELAKHFIRTNIEPKWMVLCLLPVLPPEL 283
>sp|Q8HVY4|RPOC1_SOYBN DNA-directed RNA polymerase subunit beta'
OS=Glycine max GN=rpoC1 PE=3 SV=2
Length = 687
Score = 79.0 bits (193), Expect = 9e-15
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHF++TN+EPEWMV CLLPVLPP+L
Sbjct: 232 NEWEDRKVGRRKNFLVRRIELAKHFLRTNIEPEWMVLCLLPVLPPEL 278
>sp|A8W3B5|RPOC1_CUSEX DNA-directed RNA polymerase subunit beta'
OS=Cuscuta exaltata GN=rpoC1 PE=3 SV=1
Length = 691
Score = 79.0 bits (193), Expect = 9e-15
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+L KHFI+TN+EP+WMV CLLPVLPP+L
Sbjct: 237 NEWEDRKAGRRKGFLVRRMELVKHFIRTNIEPKWMVLCLLPVLPPEL 283
>sp|Q0G9X1|RPOC1_DAUCA DNA-directed RNA polymerase subunit beta'
OS=Daucus carota GN=rpoC1 PE=3 SV=2
Length = 677
Score = 78.6 bits (192), Expect = 1e-14
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN++P+WMV CLLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLVRRMELAKHFIRTNIDPKWMVLCLLPVLPPEL 276
>sp|Q09MI7|RPOC1_CITSI DNA-directed RNA polymerase subunit beta'
OS=Citrus sinensis GN=rpoC1 PE=3 SV=1
Length = 680
Score = 78.2 bits (191), Expect = 1e-14
Identities = 33/47 (70%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++WEDRK R+ FL+RRM+LAKHF++TN+EPEWMV CLLPVLPP+L
Sbjct: 230 NDWEDRKIGRRRDFLVRRMELAKHFLRTNIEPEWMVLCLLPVLPPEL 276
>sp|Q2VEI5|RPOC1_SOLTU DNA-directed RNA polymerase subunit beta'
OS=Solanum tuberosum GN=rpoC1 PE=3 SV=2
Length = 687
Score = 77.8 bits (190), Expect = 2e-14
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFIQ+N++P+WMV+CLLPVLPP+L
Sbjct: 236 NEWEDRKVGRRKDFLVRRVELAKHFIQSNIDPQWMVWCLLPVLPPEL 282
>sp|Q06RE0|RPOC1_JASNU DNA-directed RNA polymerase subunit beta'
OS=Jasminum nudiflorum GN=rpoC1 PE=3 SV=2
Length = 691
Score = 77.8 bits (190), Expect = 2e-14
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWED+K R+ FL+RRM+LAKHFI+TN+EPEWMV CLLPVLPP L
Sbjct: 230 NEWEDQKVRRRRGFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPDL 276
>sp|A1XGM9|RPOC1_RANMC DNA-directed RNA polymerase subunit beta'
OS=Ranunculus macranthus GN=rpoC1 PE=3 SV=1
Length = 680
Score = 77.4 bits (189), Expect = 3e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TNVEPE MV CLLPVLPP+L
Sbjct: 230 NEWEDRKMGRRKSFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPEL 276
>sp|A7M957|RPOC1_CUSRE DNA-directed RNA polymerase subunit beta'
OS=Cuscuta reflexa GN=rpoC1 PE=2 SV=2
Length = 691
Score = 76.6 bits (187), Expect = 4e-14
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+L KHFI+TN+EPEWMV LLPVLPP+L
Sbjct: 237 NEWEDRKAGRRKGFLVRRMELVKHFIRTNIEPEWMVLSLLPVLPPEL 283
>sp|Q09FX0|RPOC1_NANDO DNA-directed RNA polymerase subunit beta'
OS=Nandina domestica GN=rpoC1 PE=3 SV=1
Length = 680
Score = 76.3 bits (186), Expect = 6e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TNVEPE MV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPEL 276
>sp|Q0G9M8|RPOC1_LIRTU DNA-directed RNA polymerase subunit beta'
OS=Liriodendron tulipifera GN=rpoC1 PE=3 SV=1
Length = 681
Score = 76.3 bits (186), Expect = 6e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TNVEPE MV CLLPVLPP+L
Sbjct: 231 NEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPEL 277
>sp|Q06H06|RPOC1_DRIGR DNA-directed RNA polymerase subunit beta'
OS=Drimys granadensis GN=rpoC1 PE=3 SV=1
Length = 681
Score = 76.3 bits (186), Expect = 6e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TNVEPE MV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPEL 276
>sp|Q5QA71|RPOC1_ACOGR DNA-directed RNA polymerase subunit beta'
OS=Acorus gramineus GN=rpoC1 PE=3 SV=2
Length = 682
Score = 76.3 bits (186), Expect = 6e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TNVEPE MV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPEL 276
>sp|Q3V543|RPOC1_ACOCL DNA-directed RNA polymerase subunit gamma
OS=Acorus calamus GN=rpoC1 PE=3 SV=1
Length = 682
Score = 76.3 bits (186), Expect = 6e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TNVEPE MV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPEL 276
>sp|A9LYH6|RPOC1_ACOAM DNA-directed RNA polymerase subunit beta'
OS=Acorus americanus GN=rpoC1 PE=3 SV=1
Length = 682
Score = 76.3 bits (186), Expect = 6e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TNVEPE MV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPEL 276
>sp|Q6EW57|RPOC1_NYMAL DNA-directed RNA polymerase subunit beta'
OS=Nymphaea alba GN=rpoC1 PE=3 SV=2
Length = 684
Score = 75.9 bits (185), Expect = 7e-14
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++WEDRK RK FL+RRM+LAKHF++TNVEPEWMV LLPVLPP+L
Sbjct: 230 NDWEDRKIGRRKDFLVRRMELAKHFLRTNVEPEWMVLSLLPVLPPEL 276
>sp|A8SE82|RPOC1_CERDE DNA-directed RNA polymerase subunit beta'
OS=Ceratophyllum demersum GN=rpoC1 PE=3 SV=1
Length = 680
Score = 75.9 bits (185), Expect = 7e-14
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EPE MV CLLPVLPP+L
Sbjct: 230 NEWEDRKIRRRKDFLVRRMELAKHFIRTNIEPERMVLCLLPVLPPEL 276
>sp|Q3BAQ1|RPOC1_PHAAO DNA-directed RNA polymerase subunit beta'
OS=Phalaenopsis aphrodite subsp. formosana GN=rpoC1 PE=3
SV=2
Length = 679
Score = 75.5 bits (184), Expect = 1e-13
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWE++K RK FL+RR++LAKHF++TNV+PEWMV CLLPVLPP+L
Sbjct: 230 NEWEEKKIRRRKDFLVRRIELAKHFLRTNVDPEWMVLCLLPVLPPEL 276
>sp|A0A326|RPOC1_COFAR DNA-directed RNA polymerase subunit beta'
OS=Coffea arabica GN=rpoC1 PE=3 SV=1
Length = 683
Score = 75.5 bits (184), Expect = 1e-13
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+L KHFI+TN+EPEWMV LLPVLPP+L
Sbjct: 233 NEWEDRKVGRRKDFLVRRMELTKHFIRTNIEPEWMVLFLLPVLPPEL 279
>sp|Q56P12|RPOC1_LACSA DNA-directed RNA polymerase subunit beta'
OS=Lactuca sativa GN=rpoC1 PE=3 SV=2
Length = 689
Score = 74.7 bits (182), Expect = 2e-13
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EP+WMV LLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLLRRMELAKHFIRTNIEPKWMVLRLLPVLPPEL 276
>sp|Q1KXX1|RPOC1_HELAN DNA-directed RNA polymerase subunit beta'
OS=Helianthus annuus GN=rpoC1 PE=3 SV=2
Length = 689
Score = 74.7 bits (182), Expect = 2e-13
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+TN+EP+WMV LLPVLPP+L
Sbjct: 230 NEWEDRKVGRRKDFLLRRMELAKHFIRTNIEPKWMVLRLLPVLPPEL 276
>sp|Q7YJX9|RPOC1_CALFG DNA-directed RNA polymerase subunit beta'
OS=Calycanthus floridus var. glaucus GN=rpoC1 PE=3 SV=1
Length = 678
Score = 74.7 bits (182), Expect = 2e-13
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TNVEPE MV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRIELAKHFIRTNVEPERMVLCLLPVLPPEL 276
>sp|A6MM27|RPOC1_BUXMI DNA-directed RNA polymerase subunit beta'
OS=Buxus microphylla GN=rpoC1 PE=3 SV=1
Length = 685
Score = 73.9 bits (180), Expect = 3e-13
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RRM+LAKHFI+T VEPE MV CLLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRMELAKHFIRTKVEPERMVLCLLPVLPPEL 276
>sp|A6MMJ8|RPOC1_DIOEL DNA-directed RNA polymerase subunit beta'
OS=Dioscorea elephantipes GN=rpoC1 PE=3 SV=1
Length = 685
Score = 73.6 bits (179), Expect = 4e-13
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL++RM+LAKHFI+TNVEP+ MV CLLPVLPP+L
Sbjct: 233 NEWEDRKIRRRKDFLVKRMELAKHFIRTNVEPKRMVLCLLPVLPPEL 279
>sp|P06273|RPOC1_MARPO DNA-directed RNA polymerase subunit beta'
OS=Marchantia polymorpha GN=rpoC1 PE=3 SV=1
Length = 684
Score = 73.2 bits (178), Expect = 5e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK L+RR++LAKHFIQTN++PEWMV LLPVLPP+L
Sbjct: 230 NEWEDRKIQRRKDLLVRRIKLAKHFIQTNIKPEWMVLSLLPVLPPEL 276
>sp|P52733|RPOC1_PINTH DNA-directed RNA polymerase subunit beta'
OS=Pinus thunbergii GN=rpoC1 PE=3 SV=1
Length = 696
Score = 72.4 bits (176), Expect = 8e-13
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPK 6
D WED K RK FL+ RM+LAKHF++TN+EP+WMV CLLPVLPP+
Sbjct: 246 DRWEDEKIRRRKDFLVGRMKLAKHFLRTNIEPKWMVLCLLPVLPPE 291
>sp|A6MMT5|RPOC1_ILLOL DNA-directed RNA polymerase subunit beta'
OS=Illicium oligandrum GN=rpoC1 PE=3 SV=1
Length = 689
Score = 72.0 bits (175), Expect = 1e-12
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -2
Query: 137 WEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
WEDRK RK FL++RM+LAKHF++TNVEPE MV CLLPVLPP+L
Sbjct: 239 WEDRKIGRRKDFLVKRMELAKHFLRTNVEPERMVLCLLPVLPPEL 283
>sp|P60287|RPOC1_AMBTC DNA-directed RNA polymerase subunit beta'
OS=Amborella trichopoda GN=rpoC1 PE=3 SV=1
Length = 680
Score = 72.0 bits (175), Expect = 1e-12
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWED+K RK FL+RRM+LAKH ++TNVEPE MV CLLPVLPP+L
Sbjct: 230 NEWEDKKIVRRKDFLVRRMELAKHLLRTNVEPERMVLCLLPVLPPEL 276
>sp|Q06GR9|RPOC1_PIPCE DNA-directed RNA polymerase subunit beta'
OS=Piper cenocladum GN=rpoC1 PE=3 SV=1
Length = 688
Score = 70.9 bits (172), Expect = 2e-12
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAKHFI+TNVEPE MV LLPVLPP+L
Sbjct: 230 NEWEDRKIGRRKDFLVRRIELAKHFIRTNVEPERMVLSLLPVLPPEL 276
>sp|Q85WS8|RPOC1_PINKO DNA-directed RNA polymerase subunit beta'
OS=Pinus koraiensis GN=rpoC1 PE=3 SV=1
Length = 696
Score = 70.9 bits (172), Expect = 2e-12
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPK 6
D WED K RK FL+ R++LAKHF++TN+EP+WMV CLLPVLPP+
Sbjct: 246 DRWEDEKIRRRKDFLVGRIKLAKHFLRTNIEPKWMVLCLLPVLPPE 291
>sp|A6MMB3|RPOC1_CHLSC DNA-directed RNA polymerase subunit beta'
OS=Chloranthus spicatus GN=rpoC1 PE=3 SV=1
Length = 688
Score = 70.9 bits (172), Expect = 2e-12
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK FL+RR++LAK+ I+TNVEPEWMV LLPVLPP+L
Sbjct: 234 NEWEDRKIGRRKDFLVRRLELAKNLIRTNVEPEWMVLRLLPVLPPEL 280
>sp|Q85CL6|RPOC1_ANTFO DNA-directed RNA polymerase subunit beta'
OS=Anthoceros formosae GN=rpoC1 PE=2 SV=1
Length = 681
Score = 70.9 bits (172), Expect = 2e-12
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK L+RRM+LAK+F+QTN++PEWMV LLPVLPP+L
Sbjct: 230 NEWEDRKIQRRKDLLVRRMELAKNFLQTNMKPEWMVLSLLPVLPPEL 276
>sp|A6H5F8|RPOC1_CYCTA DNA-directed RNA polymerase subunit beta'
OS=Cycas taitungensis GN=rpoC1 PE=3 SV=1
Length = 681
Score = 69.7 bits (169), Expect = 5e-12
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = -2
Query: 137 WEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
W DRK RK F +RRM+LAKHF+QT++EPEWMV C LPVLPP+L
Sbjct: 232 WGDRKIQRRKDFSVRRMKLAKHFLQTDIEPEWMVLCPLPVLPPEL 276
>sp|A2T323|RPOC1_ANGEV DNA-directed RNA polymerase subunit beta'
OS=Angiopteris evecta GN=rpoC1 PE=3 SV=1
Length = 687
Score = 69.7 bits (169), Expect = 5e-12
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DEWED+ RK FLIRRM+L+KHF+ TN++PEWMV +LPVLPP+L
Sbjct: 234 DEWEDQTIQRRKDFLIRRMKLSKHFLHTNIKPEWMVLDVLPVLPPEL 280
>sp|P60288|RPOC1_PHYPA DNA-directed RNA polymerase subunit beta'
OS=Physcomitrella patens subsp. patens GN=rpoC1 PE=3
SV=1
Length = 679
Score = 69.3 bits (168), Expect = 7e-12
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDRK RK L+RR++LAK F+QTN++PEWMV LLPVLPP+L
Sbjct: 227 NEWEDRKIQRRKDLLVRRIKLAKQFLQTNIKPEWMVLSLLPVLPPEL 273
>sp|B0YPL9|RPOC1_ANEMR DNA-directed RNA polymerase subunit beta'
OS=Aneura mirabilis GN=rpoC1 PE=3 SV=1
Length = 699
Score = 66.2 bits (160), Expect = 6e-11
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -2
Query: 140 EWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+W DRK K L+RRM+L+K+F+QTN+EPEWMV LLPVLPP+L
Sbjct: 231 DWGDRKIQRNKDLLVRRMKLSKYFVQTNIEPEWMVLSLLPVLPPEL 276
>sp|Q8WI25|RPOC1_PSINU DNA-directed RNA polymerase subunit beta'
OS=Psilotum nudum GN=rpoC1 PE=3 SV=1
Length = 674
Score = 62.8 bits (151), Expect = 6e-10
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+EWEDR K F++RR++L KHF+ T+V+PEWMV LLPVLPP+L
Sbjct: 235 NEWEDRGIQRIKDFMVRRIRLVKHFLYTDVKPEWMVLSLLPVLPPEL 281
>sp|B1VKH4|RPOC1_CRYJA DNA-directed RNA polymerase subunit beta'
OS=Cryptomeria japonica GN=rpoC1 PE=3 SV=1
Length = 698
Score = 61.6 bits (148), Expect = 1e-09
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
RK L+RRM+ AK+F++TNVEP+WMV CLLPVLPP L
Sbjct: 259 RKDLLVRRMRFAKYFLRTNVEPQWMVLCLLPVLPPDL 295
>sp|Q85FM8|RPOC1_ADICA DNA-directed RNA polymerase subunit beta'
OS=Adiantum capillus-veneris GN=rpoC1 PE=2 SV=2
Length = 694
Score = 61.6 bits (148), Expect = 1e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2
Query: 140 EWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
EWEDR RK LIRR++LAK F++TN++PEWMV +PVLPP+L
Sbjct: 231 EWEDRTIRRRKDLLIRRIKLAKDFLRTNMKPEWMVLYFIPVLPPEL 276
>sp|Q06FX0|RPOC1_PELHO DNA-directed RNA polymerase subunit beta'
OS=Pelargonium hortorum GN=rpoC1 PE=3 SV=1
Length = 701
Score = 60.8 bits (146), Expect = 2e-09
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 5/51 (9%)
Frame = -2
Query: 140 EWEDRKR*IRKV-----FLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
E EDRK I K+ L+RRM+LAKHF++TNV+PEWM+ LLPVLPP+L
Sbjct: 250 EEEDRK--IEKIKRRMRVLVRRMELAKHFLETNVKPEWMILRLLPVLPPEL 298
>sp|B2Y1V6|RPOC1_WELMI DNA-directed RNA polymerase subunit beta'
OS=Welwitschia mirabilis GN=rpoC1 PE=3 SV=1
Length = 696
Score = 56.6 bits (135), Expect = 5e-08
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
RK FL+RR++ K+ IQ ++PEWMV CLLPVLPP+L
Sbjct: 252 RKNFLVRRIKFVKYLIQAKIKPEWMVLCLLPVLPPEL 288
>sp|A6BM51|RPOC1_GNEPA DNA-directed RNA polymerase subunit beta'
OS=Gnetum parvifolium GN=rpoC1 PE=3 SV=1
Length = 747
Score = 56.2 bits (134), Expect = 6e-08
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
RK FL++R++ AK+ IQ + PEWMV CLLPVLPP+L
Sbjct: 249 RKNFLVKRIKFAKNLIQAKINPEWMVLCLLPVLPPEL 285
>sp|Q8MA11|RPOC1_CHAGL DNA-directed RNA polymerase subunit beta'
OS=Chaetosphaeridium globosum GN=rpoC1 PE=3 SV=1
Length = 661
Score = 55.1 bits (131), Expect = 1e-07
Identities = 24/47 (51%), Positives = 35/47 (74%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+ +ED+K K +IRR++LAK F + N++PEWMV +LPVLPP+L
Sbjct: 230 NSYEDKKIQRMKDIIIRRIKLAKQFFENNIKPEWMVLSVLPVLPPEL 276
>sp|Q5SCX9|RPOC1_HUPLU DNA-directed RNA polymerase subunit beta'
OS=Huperzia lucidula GN=rpoC1 PE=3 SV=1
Length = 676
Score = 54.3 bits (129), Expect = 2e-07
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
RK FL+RR +L K FIQT PEWMV +LPVLPP+L
Sbjct: 248 RKDFLVRRFKLIKFFIQTKTNPEWMVLSILPVLPPEL 284
>sp|Q9MUS6|RPOC1_MESVI DNA-directed RNA polymerase subunit beta'
OS=Mesostigma viride GN=rpoC1 PE=3 SV=1
Length = 668
Score = 50.1 bits (118), Expect = 4e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = -2
Query: 134 EDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
E+ +R ++ LI+R+++ HFI T +PEWMV +LPVLPP+L
Sbjct: 251 EEERRNKKRNKLIKRLRIINHFIATGAKPEWMVLSILPVLPPEL 294
>sp|Q19V99|RPOC1_CHLAT DNA-directed RNA polymerase subunit beta'
OS=Chlorokybus atmophyticus GN=rpoC1 PE=3 SV=2
Length = 717
Score = 48.9 bits (115), Expect = 1e-05
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+E EDR R R LI+R+++ HF+ T +PEWM+ +LPVLPP L
Sbjct: 224 EEEEDRLRKKRNK-LIKRLKIINHFLATGAKPEWMILSILPVLPPDL 269
>sp|Q9TL05|RPOC1_NEPOL DNA-directed RNA polymerase subunit beta'
OS=Nephroselmis olivacea GN=rpoC1 PE=3 SV=1
Length = 863
Score = 48.5 bits (114), Expect = 1e-05
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
R+ LIRR+QL +F+QT +PEWMV LPVLPP L
Sbjct: 363 RRSKLIRRLQLIHYFMQTKAQPEWMVIKALPVLPPDL 399
>sp|Q1ACN5|RPOC1_CHAVU DNA-directed RNA polymerase subunit beta'
OS=Chara vulgaris GN=rpoC1 PE=3 SV=1
Length = 666
Score = 47.4 bits (111), Expect = 3e-05
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DE E +K K L+RR+++A +F +T ++P+WMV +PVLPP L
Sbjct: 230 DEKEAQKAQREKERLVRRIKIASYFQETKIKPQWMVLSTIPVLPPDL 276
>sp|Q20EX2|RPOC1_OLTVI DNA-directed RNA polymerase subunit beta'
OS=Oltmannsiellopsis viridis GN=rpoC1 PE=3 SV=1
Length = 1021
Score = 46.6 bits (109), Expect = 5e-05
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = -2
Query: 101 LIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++RR++L ++F QTN+ P+WMV +LPVLPP L
Sbjct: 557 VLRRLKLVRYFRQTNMRPQWMVLSVLPVLPPDL 589
>sp|P41185|RPOC_BUCAP DNA-directed RNA polymerase subunit beta'
OS=Buchnera aphidicola subsp. Schizaphis graminum
GN=rpoC PE=3 SV=2
Length = 1413
Score = 43.9 bits (102), Expect = 3e-04
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = -2
Query: 101 LIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
L +R++L + FIQ+N +PEWM+ +LPVLPP L
Sbjct: 217 LTKRIKLLESFIQSNNKPEWMILTVLPVLPPDL 249
>sp|Q1RHD1|RPOC_RICBR DNA-directed RNA polymerase subunit beta'
OS=Rickettsia bellii (strain RML369-C) GN=rpoC PE=3 SV=1
Length = 1361
Score = 43.5 bits (101), Expect = 4e-04
Identities = 16/47 (34%), Positives = 34/47 (72%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+E ++ ++K L++R++L + F+++ +PEWM+ +LPV+PP+L
Sbjct: 203 EELQNTTSEVKKKKLVKRLKLVEDFLESENKPEWMIMNVLPVMPPEL 249
>sp|A8GV25|RPOC_RICB8 DNA-directed RNA polymerase subunit beta'
OS=Rickettsia bellii (strain OSU 85-389) GN=rpoC PE=3
SV=2
Length = 1372
Score = 43.5 bits (101), Expect = 4e-04
Identities = 16/47 (34%), Positives = 34/47 (72%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+E ++ ++K L++R++L + F+++ +PEWM+ +LPV+PP+L
Sbjct: 203 EELQNTTSEVKKKKLVKRLKLVEDFLESENKPEWMIMNVLPVMPPEL 249
>sp|B2UQY1|RPOC_AKKM8 DNA-directed RNA polymerase subunit beta'
OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=rpoC
PE=3 SV=1
Length = 1398
Score = 43.5 bits (101), Expect = 4e-04
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = -2
Query: 101 LIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+ +R++LA+ F+Q+N PEWM+ +LPV+PP L
Sbjct: 221 IAKRLKLAQGFLQSNTRPEWMILNVLPVIPPDL 253
>sp|Q3AHX6|RPOC1_SYNSC DNA-directed RNA polymerase subunit gamma
OS=Synechococcus sp. (strain CC9605) GN=rpoC1 PE=3 SV=1
Length = 634
Score = 43.5 bits (101), Expect = 4e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN PEWMV ++PV+PP L
Sbjct: 224 KRAKLIKRLRVIDNFIATNARPEWMVLDVIPVIPPDL 260
>sp|Q55346|RPOC1_SYNPW DNA-directed RNA polymerase subunit gamma
OS=Synechococcus sp. (strain WH7803) GN=rpoC1 PE=3 SV=2
Length = 634
Score = 43.5 bits (101), Expect = 4e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN PEWMV ++PV+PP L
Sbjct: 224 KRAKLIKRLRVIDNFIATNARPEWMVLDVIPVIPPDL 260
>sp|A8GQW5|RPOC_RICRS DNA-directed RNA polymerase subunit beta'
OS=Rickettsia rickettsii (strain Sheila Smith) GN=rpoC
PE=3 SV=1
Length = 1372
Score = 43.1 bits (100), Expect = 5e-04
Identities = 14/38 (36%), Positives = 31/38 (81%)
Frame = -2
Query: 116 IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++K L++R++L ++F+++ +PEWM+ +LPV+PP++
Sbjct: 212 VKKKKLVKRLKLVENFLESENKPEWMIMDVLPVIPPEI 249
>sp|B0BWB0|RPOC_RICRO DNA-directed RNA polymerase subunit beta'
OS=Rickettsia rickettsii (strain Iowa) GN=rpoC PE=3 SV=1
Length = 1372
Score = 43.1 bits (100), Expect = 5e-04
Identities = 14/38 (36%), Positives = 31/38 (81%)
Frame = -2
Query: 116 IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++K L++R++L ++F+++ +PEWM+ +LPV+PP++
Sbjct: 212 VKKKKLVKRLKLVENFLESENKPEWMIMDVLPVIPPEI 249
>sp|Q9RH40|RPOC_RICCN DNA-directed RNA polymerase subunit beta'
OS=Rickettsia conorii GN=rpoC PE=3 SV=2
Length = 1372
Score = 43.1 bits (100), Expect = 5e-04
Identities = 14/38 (36%), Positives = 31/38 (81%)
Frame = -2
Query: 116 IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++K L++R++L ++F+++ +PEWM+ +LPV+PP++
Sbjct: 212 VKKKKLVKRLKLVENFLESENKPEWMIMDVLPVIPPEI 249
>sp|P42080|RPOC1_CYAPA DNA-directed RNA polymerase subunit beta'
OS=Cyanophora paradoxa GN=rpoC1 PE=3 SV=2
Length = 636
Score = 43.1 bits (100), Expect = 5e-04
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = -2
Query: 134 EDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+ +K ++ LI+++++ +FI T +PEWM+ L+PV+PP L
Sbjct: 217 DKKKNTQKRAKLIKKLRIINNFIATKAKPEWMILSLIPVIPPDL 260
>sp|A8EXK9|RPOC_RICCK DNA-directed RNA polymerase subunit beta'
OS=Rickettsia canadensis (strain McKiel) GN=rpoC PE=3
SV=1
Length = 1378
Score = 42.7 bits (99), Expect = 7e-04
Identities = 15/47 (31%), Positives = 34/47 (72%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
+E ++ ++K L++R++L + F+++ +PEWM+ +LPV+PP++
Sbjct: 203 EELQNTTSEVKKKKLVKRLKLVEDFLESENKPEWMIIDVLPVIPPEI 249
>sp|Q0I7L8|RPOC1_SYNS3 DNA-directed RNA polymerase subunit gamma
OS=Synechococcus sp. (strain CC9311) GN=rpoC1 PE=3 SV=1
Length = 634
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRLRVIDNFIATNARPEWMVLDAIPVIPPDL 260
>sp|A2BT60|RPOC1_PROMS DNA-directed RNA polymerase subunit gamma
OS=Prochlorococcus marinus (strain AS9601) GN=rpoC1 PE=3
SV=1
Length = 634
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN +PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRIRVIDNFIATNAKPEWMVLDAIPVIPPDL 260
>sp|Q7V5P2|RPOC1_PROMM DNA-directed RNA polymerase subunit gamma
OS=Prochlorococcus marinus (strain MIT 9313) GN=rpoC1
PE=3 SV=1
Length = 634
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRLRVIDNFIATNARPEWMVLDAIPVIPPDL 260
>sp|P42076|RPOC1_PROMA DNA-directed RNA polymerase subunit gamma
OS=Prochlorococcus marinus GN=rpoC1 PE=3 SV=2
Length = 634
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRLRVIDNFIATNARPEWMVLNAIPVIPPDL 260
>sp|Q318Q8|RPOC1_PROM9 DNA-directed RNA polymerase subunit gamma
OS=Prochlorococcus marinus (strain MIT 9312) GN=rpoC1
PE=3 SV=1
Length = 634
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN +PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRIRVIDNFIATNAKPEWMVLDAIPVIPPDL 260
>sp|A2BYL0|RPOC1_PROM5 DNA-directed RNA polymerase subunit gamma
OS=Prochlorococcus marinus (strain MIT 9515) GN=rpoC1
PE=3 SV=1
Length = 634
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN +PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRIRVIDNFIATNAKPEWMVLDAIPVIPPDL 260
>sp|A9BCH5|RPOC1_PROM4 DNA-directed RNA polymerase subunit gamma
OS=Prochlorococcus marinus (strain MIT 9211) GN=rpoC1
PE=3 SV=1
Length = 633
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRLRVIDNFIATNARPEWMVLDAIPVIPPDL 260
>sp|A2C6S9|RPOC1_PROM3 DNA-directed RNA polymerase subunit gamma
OS=Prochlorococcus marinus (strain MIT 9303) GN=rpoC1
PE=3 SV=1
Length = 634
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRLRVIDNFIATNARPEWMVLDAIPVIPPDL 260
>sp|A8G6Y5|RPOC1_PROM2 DNA-directed RNA polymerase subunit gamma
OS=Prochlorococcus marinus (strain MIT 9215) GN=rpoC1
PE=3 SV=1
Length = 634
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN +PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRIRVIDNFIATNAKPEWMVLDAIPVIPPDL 260
>sp|A3PEX3|RPOC1_PROM0 DNA-directed RNA polymerase subunit gamma
OS=Prochlorococcus marinus (strain MIT 9301) GN=rpoC1
PE=3 SV=1
Length = 634
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI TN +PEWMV +PV+PP L
Sbjct: 224 KRAKLIKRIRVIDNFIATNAKPEWMVLDAIPVIPPDL 260
>sp|Q68XM7|RPOC_RICTY DNA-directed RNA polymerase subunit beta'
OS=Rickettsia typhi GN=rpoC PE=3 SV=1
Length = 1372
Score = 42.4 bits (98), Expect = 0.001
Identities = 14/38 (36%), Positives = 30/38 (78%)
Frame = -2
Query: 116 IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++K L++R++L + F+++ +PEWM+ +LPV+PP++
Sbjct: 212 VKKKKLVKRLKLVEDFLESENKPEWMIMDVLPVIPPEI 249
>sp|Q9ZE20|RPOC_RICPR DNA-directed RNA polymerase subunit beta'
OS=Rickettsia prowazekii GN=rpoC PE=3 SV=1
Length = 1372
Score = 42.4 bits (98), Expect = 0.001
Identities = 14/38 (36%), Positives = 30/38 (78%)
Frame = -2
Query: 116 IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++K L++R++L + F+++ +PEWM+ +LPV+PP++
Sbjct: 212 VKKKKLVKRLKLVEDFLESENKPEWMIMDVLPVIPPEI 249
>sp|A8F0P8|RPOC_RICM5 DNA-directed RNA polymerase subunit beta'
OS=Rickettsia massiliae (strain Mtu5) GN=rpoC PE=3 SV=1
Length = 1374
Score = 42.4 bits (98), Expect = 0.001
Identities = 14/38 (36%), Positives = 30/38 (78%)
Frame = -2
Query: 116 IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++K L++R++L + F+++ +PEWM+ +LPV+PP++
Sbjct: 214 VKKKKLVKRLKLVEDFLESENKPEWMIMDVLPVIPPEI 251
>sp|Q4UKD5|RPOC_RICFE DNA-directed RNA polymerase subunit beta'
OS=Rickettsia felis GN=rpoC PE=3 SV=1
Length = 1372
Score = 42.4 bits (98), Expect = 0.001
Identities = 14/38 (36%), Positives = 30/38 (78%)
Frame = -2
Query: 116 IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++K L++R++L + F+++ +PEWM+ +LPV+PP++
Sbjct: 212 VKKKKLVKRLKLVEDFLESENKPEWMIMDVLPVIPPEI 249
>sp|Q4FLL3|RPOC_PELUB DNA-directed RNA polymerase subunit beta'
OS=Pelagibacter ubique (strain HTCC1062) GN=rpoC PE=3
SV=1
Length = 1389
Score = 42.4 bits (98), Expect = 0.001
Identities = 15/32 (46%), Positives = 26/32 (81%)
Frame = -2
Query: 98 IRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
I+R++L + FI+T +PEWM+ ++PV+PP+L
Sbjct: 222 IKRLKLIESFIETGQKPEWMILTVIPVIPPEL 253
>sp|A0Q866|RPOC_FRATN DNA-directed RNA polymerase subunit beta'
OS=Francisella tularensis subsp. novicida (strain U112)
GN=rpoC PE=3 SV=1
Length = 1417
Score = 42.4 bits (98), Expect = 0.001
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = -2
Query: 140 EWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
E+E+ K +K I+R++L + F + +PEWMV +LPVLPP L
Sbjct: 202 EYEESKSTAKKEKAIKRLRLLETFQASGNKPEWMVMTVLPVLPPDL 247
>sp|B0TX11|RPOC_FRAP2 DNA-directed RNA polymerase subunit beta'
OS=Francisella philomiragia subsp. philomiragia (strain
ATCC 25017) GN=rpoC PE=3 SV=1
Length = 1416
Score = 42.4 bits (98), Expect = 0.001
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = -2
Query: 140 EWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
E+E+ K +K I+R++L + F + +PEWMV +LPVLPP L
Sbjct: 202 EYEESKSTAKKEKAIKRLRLLETFQASGNKPEWMVMTVLPVLPPDL 247
>sp|Q89B21|RPOC_BUCBP DNA-directed RNA polymerase subunit beta'
OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=rpoC PE=3 SV=1
Length = 1404
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = -2
Query: 143 DEWEDRKR*IRKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
DE + ++ L +R++L + FI +N +PEWM+ +LP+LPP L
Sbjct: 203 DELNNSNSETKRKKLTKRIKLLESFIHSNNKPEWMILTVLPILPPDL 249
>sp|Q8DL56|RPOC1_THEEB DNA-directed RNA polymerase subunit gamma
OS=Thermosynechococcus elongatus (strain BP-1) GN=rpoC1
PE=3 SV=1
Length = 622
Score = 42.4 bits (98), Expect = 0.001
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
++ LI+R+++ +FI T +PEWMV ++PV+PP L
Sbjct: 219 KRAKLIKRLRVIDNFIATGAKPEWMVLTVIPVIPPDL 255
>sp|B1X3M9|RPOC1_PAUCH DNA-directed RNA polymerase subunit beta'
OS=Paulinella chromatophora GN=rpoC1 PE=3 SV=1
Length = 643
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2
Query: 113 RKVFLIRRMQLAKHFIQTNVEPEWMVFCLLPVLPPKL 3
R+ LI+R+++ +FI T +PEWMV ++PV+PP L
Sbjct: 233 RRAKLIKRLRVIDNFIATGAKPEWMVLDVVPVIPPDL 269
