miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q7EXZ2|SPL14_ORYSJ Squamosa promoter-binding-like protein 14
OS=Oryza sativa subsp. japonica GN=SPL14 PE=2 SV=1
Length = 417
Score = 79.7 bits (195), Expect = 5e-15
Identities = 40/63 (63%), Positives = 42/63 (66%), Gaps = 10/63 (15%)
Frame = -2
Query: 167 GYGPHAYGSHG--------FPGPELPPGGCLTGV--ATDSSCALSLLSTQPWDTTTHGAS 18
GYG + Y G F GP LPPGGCL GV ATDSSCALSLLSTQPWDTTTH A+
Sbjct: 249 GYGANTYSGQGSSSSGPPVFAGPNLPPGGCLAGVGAATDSSCALSLLSTQPWDTTTHSAA 308
Query: 17 HDH 9
H
Sbjct: 309 ASH 311
>sp|A3C057|SPL17_ORYSJ Squamosa promoter-binding-like protein 17
OS=Oryza sativa subsp. japonica GN=SPL17 PE=2 SV=2
Length = 393
Score = 68.6 bits (166), Expect = 1e-11
Identities = 35/58 (60%), Positives = 38/58 (65%), Gaps = 10/58 (17%)
Frame = -2
Query: 155 HAYGSHG----------FPGPELPPGGCLTGVATDSSCALSLLSTQPWDTTTHGASHD 12
HA+ SHG P EL GGCL GVATDSSCALSLLSTQPWDTT +SH+
Sbjct: 226 HAFSSHGGSAAGAPMLHHPAFELTSGGCLAGVATDSSCALSLLSTQPWDTTQSTSSHN 283
