miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P0C282|SAP18_ORYSJ Zinc finger A20 domain-containing
stress-associated protein 18 OS=Oryza sativa subsp.
japonica GN=SAP18 PE=2 SV=1
Length = 201
Score = 36.2 bits (82), Expect(2) = 9e-05
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2
Query: 110 RTFDDKSNHNKINDNYIIFL 51
RTFDDKS+H KINDN I FL
Sbjct: 63 RTFDDKSSHGKINDNNINFL 82
Score = 28.9 bits (63), Expect(2) = 9e-05
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -1
Query: 60 NFFNKMNG*MLVKKSTALYI 1
NF NK N LVKKSTA YI
Sbjct: 80 NFLNKTNSQTLVKKSTASYI 99
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat_field protein 15 OS=Arabidopsis
thaliana GN=FBL15 PE=1 SV=2
Length = 990
Score = 51.6 bits (122), Expect = 2e-06
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +1
Query: 1 TNSIFEVFSDGGGCPMLKSLVLDNCESL 84
+NS+ ++FSD GGCPMLKSL+LDNCESL
Sbjct: 565 SNSVCKIFSDDGGCPMLKSLILDNCESL 592
