miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like
protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1
Length = 1054
Score = 56.6 bits (135), Expect = 5e-08
Identities = 26/53 (49%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 EDSNIVSAL--IYHHIPSHLKRCFAYCAIFPRDLHMFVRELLILL*MAENFIQ 155
+ SN++ L Y+++P+HLKRCFAYC+IFP+ H F ++ ++LL MAE F+Q
Sbjct: 407 DKSNLLPVLRVSYYYLPAHLKRCFAYCSIFPKG-HAFEKDKVVLLWMAEGFLQ 458
>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4
OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1
Length = 988
Score = 53.5 bits (127), Expect = 4e-07
Identities = 26/52 (50%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = +3
Query: 3 EDSNIVSAL--IYHHIPSHLKRCFAYCAIFPRDLHMFVRELLILL*MAENFI 152
++S+I+ AL YHH+P L++CFAYCA+FP+D M ++E LI L MA F+
Sbjct: 385 DESSILPALRLSYHHLPLDLRQCFAYCAVFPKDTKM-IKENLITLWMAHGFL 435
>sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3
OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2
Length = 992
Score = 49.7 bits (117), Expect = 6e-06
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +3
Query: 27 LIYHHIPSHLKRCFAYCAIFPRDLHMFVRELLILL*MAENFI 152
L YHH+P L++CFAYCA+FP+D + +E LI L MA +F+
Sbjct: 393 LSYHHLPLDLRQCFAYCAVFPKDTKI-EKEYLIALWMAHSFL 433
>sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum
bulbocastanum GN=RGA2 PE=1 SV=1
Length = 970
Score = 49.7 bits (117), Expect = 6e-06
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = +3
Query: 3 EDSNIVSAL--IYHHIPSHLKRCFAYCAIFPRDLHMFVRELLILL*MAENFI 152
++S+I+ AL YH +P LK+CFAYCA+FP+D M +E LI L MA F+
Sbjct: 384 DESSILPALRLSYHQLPLDLKQCFAYCAVFPKDAKM-EKEKLISLWMAHGFL 434
>sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1
OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2
Length = 979
Score = 49.3 bits (116), Expect = 8e-06
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +3
Query: 3 EDSNIVSAL--IYHHIPSHLKRCFAYCAIFPRDLHMFVRELLILL*MAENFI 152
++S+I+ AL YHH+P L++CF YCA+FP+D M +E LI MA F+
Sbjct: 383 DESSILPALRLSYHHLPLDLRQCFVYCAVFPKDTKM-AKENLIAFWMAHGFL 433
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460
OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1
Length = 1424
Score = 47.0 bits (110), Expect = 4e-05
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +3
Query: 18 VSALIYHHIPSHLKRCFAYCAIFPRDLHMFVRELLILL*MAENFIQCPHES 170
V L Y +P LKRCFA C+IFP+ H+F RE L+LL MA + + P S
Sbjct: 406 VLKLSYDSLPPQLKRCFALCSIFPKG-HVFDREELVLLWMAIDLLYQPRSS 455
