miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|A3C057|SPL17_ORYSJ Squamosa promoter-binding-like protein 17
OS=Oryza sativa subsp. japonica GN=SPL17 PE=2 SV=2
Length = 393
Score = 76.3 bits (186), Expect = 6e-14
Identities = 55/142 (38%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKPS--LLSTRYGTVSSSIFENNGNSGGFLMDF--------- 209
DQ K+SCRRRLAGHNERRRKP+ LS+RYG +++S E G S F++DF
Sbjct: 128 DQEKKSCRRRLAGHNERRRKPTPGPLSSRYGRLAASFHEEPGRSRSFVVDFSYPRVPSSV 187
Query: 208 ---------SSCSRGRIQWPGTXXXXXXXXAI----DLPIAGEKFPPLPWQSNLDNPPPY 68
S G IQW G A+ D L +P
Sbjct: 188 RDAWPAIQPSDRMSGSIQWQGGHELHPHRSAVAGYSDHHAFSSHGGSAAGAPMLHHPAFE 247
Query: 67 VPPGGCFNGVREDSNCALSLLS 2
+ GGC GV DS+CALSLLS
Sbjct: 248 LTSGGCLAGVATDSSCALSLLS 269
>sp|Q7EXZ2|SPL14_ORYSJ Squamosa promoter-binding-like protein 14
OS=Oryza sativa subsp. japonica GN=SPL14 PE=2 SV=1
Length = 417
Score = 75.5 bits (184), Expect = 1e-13
Identities = 58/140 (41%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKPSL-LSTRYGTVSSSIFENNGNSGGFLMDFS---SCSRGR 188
DQGKRSCRRRLAGHNERRR+P L++RYG +++S+ E+ F +DFS S R
Sbjct: 158 DQGKRSCRRRLAGHNERRRRPQTPLASRYGRLAASVGEHR-RFRSFTLDFSYPRVPSSVR 216
Query: 187 IQWPGTXXXXXXXXAI-----------DLPIAGEKFPPLPWQ-SNLDNPP----PYVPPG 56
WP I +AG Q S+ PP P +PPG
Sbjct: 217 NAWPAIQPGDRISGGIQWHRNVAPHGHSSAVAGYGANTYSGQGSSSSGPPVFAGPNLPPG 276
Query: 55 GCFNGV--REDSNCALSLLS 2
GC GV DS+CALSLLS
Sbjct: 277 GCLAGVGAATDSSCALSLLS 296
>sp|Q700W2|SPL9_ARATH Squamosa promoter-binding-like protein 9
OS=Arabidopsis thaliana GN=SPL9 PE=2 SV=2
Length = 375
Score = 66.2 bits (160), Expect = 6e-11
Identities = 52/139 (37%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKP-----SLLSTRYGTVSSSIFENNGNSGGFLMDFSSCSRG 191
D KRSCRRRLAGHNERRRKP S+L++RYG ++ S++E NG++G M+ S
Sbjct: 128 DLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYE-NGDAG---MNGSFLGNQ 183
Query: 190 RIQWPGTXXXXXXXXAIDLPIAGEKFPPLPWQSNLDNPPPYVPPGG-------------- 53
I WP + +D + WQ N N GG
Sbjct: 184 EIGWPSS-------RTLDTRVMRRPVSSPSWQINPMNVFSQGSVGGGGTSFSSPEIMDTK 236
Query: 52 --CFNGVREDSNCALSLLS 2
+ G+ DSNCALSLLS
Sbjct: 237 LESYKGI-GDSNCALSLLS 254
>sp|Q94JW8|SPL6_ARATH Squamosa promoter-binding-like protein 6
OS=Arabidopsis thaliana GN=SPL6 PE=2 SV=2
Length = 405
Score = 49.3 bits (116), Expect = 8e-06
Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKPS----------LLSTRYGTVSSSIFENN 239
D GKRSCRRRLAGHNERRRKP+ LL T V + EN+
Sbjct: 178 DDGKRSCRRRLAGHNERRRKPAFYFLPGKRHKLLRTSQDVVGNKFLENS 226
>sp|Q38740|SBP2_ANTMA Squamosa promoter-binding protein 2
OS=Antirrhinum majus GN=SBP2 PE=2 SV=1
Length = 171
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKPSLLSTRYG 269
DQ KRSCRRRLAGHNERRRK SL S + G
Sbjct: 139 DQTKRSCRRRLAGHNERRRKSSLESHKEG 167
>sp|Q9S7A9|SPL4_ARATH Squamosa promoter-binding-like protein 4
OS=Arabidopsis thaliana GN=SPL4 PE=1 SV=1
Length = 174
Score = 46.2 bits (108), Expect = 6e-05
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKPSLLSTRYGTVSSSIFENNGNSGGFLMDFSSCSRGRIQWP 176
D+ KRSCRRRLAGHNERRRK S ST YG S G +G +M SR + P
Sbjct: 108 DEAKRSCRRRLAGHNERRRKSSGEST-YGEGSG----RRGINGQVVMQNQERSRVEMTLP 162
>sp|Q9M2Q6|SPL15_ARATH Squamosa promoter-binding-like protein 15
OS=Arabidopsis thaliana GN=SPL15 PE=2 SV=1
Length = 354
Score = 45.4 bits (106), Expect = 1e-04
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKP----SLLSTRYGTVSSSIFENNGNS--GGFLMDFSSCSR 194
D KRSCRRRLA HNERRRKP +L ++ Y ++ S++ N + L D ++ S
Sbjct: 113 DLEKRSCRRRLACHNERRRKPQPTTALFTSHYSRIAPSLYGNPNAAMIKSVLGDPTAWST 172
Query: 193 GR--IQWPGTXXXXXXXXAIDLPIAGEKFPPLPWQSNLDNPPPYVPPGGCFNGVREDSNC 20
R +Q PG + E P + S+ + P N DS+C
Sbjct: 173 ARSVMQRPGPW---------QINPVRETHPHMNVLSHGSSSFTTCPE--MINNNSTDSSC 221
Query: 19 ALSLLS 2
ALSLLS
Sbjct: 222 ALSLLS 227
>sp|Q9S7P5|SPL12_ARATH Squamosa promoter-binding-like protein 12
OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1
Length = 927
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKPSLLSTRYGTVSS 257
D+GKRSCRRRLAGHN+RRRK + + GT S
Sbjct: 181 DEGKRSCRRRLAGHNKRRRKANPDTIGNGTSMS 213
>sp|Q38741|SBP1_ANTMA Squamosa promoter-binding protein 1
OS=Antirrhinum majus GN=SBP1 PE=2 SV=1
Length = 131
Score = 43.9 bits (102), Expect = 3e-04
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKPS 290
D+ KRSCRRRLAGHNERRRK S
Sbjct: 106 DEAKRSCRRRLAGHNERRRKSS 127
>sp|Q9SMX9|SPL1_ARATH Squamosa promoter-binding-like protein 1
OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2
Length = 881
Score = 43.5 bits (101), Expect = 4e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRK 296
D+GKRSCRRRLAGHN+RRRK
Sbjct: 160 DEGKRSCRRRLAGHNKRRRK 179
>sp|Q75LH6|SPL6_ORYSJ Squamosa promoter-binding-like protein 6
OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1
Length = 969
Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRK 296
D+GKRSCRRRLAGHN RRRK
Sbjct: 206 DEGKRSCRRRLAGHNRRRRK 225
>sp|Q9S758|SPL5_ARATH Squamosa promoter-binding-like protein 5
OS=Arabidopsis thaliana GN=SPL5 PE=2 SV=1
Length = 181
Score = 43.1 bits (100), Expect = 5e-04
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKPS 290
D+ KRSCRRRLAGHNERRRK S
Sbjct: 117 DEAKRSCRRRLAGHNERRRKIS 138
>sp|Q6Z8M8|SPL15_ORYSJ Squamosa promoter-binding-like protein 15
OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1
Length = 1140
Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRK 296
D+GKRSCRRRLAGHN RRRK
Sbjct: 241 DEGKRSCRRRLAGHNRRRRK 260
>sp|A2YX04|SPL15_ORYSI Squamosa promoter-binding-like protein 15
OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1
Length = 1140
Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRK 296
D+GKRSCRRRLAGHN RRRK
Sbjct: 241 DEGKRSCRRRLAGHNRRRRK 260
>sp|Q8RY95|SPL14_ARATH Squamosa promoter-binding-like protein 14
OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3
Length = 1035
Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRK 296
D+GKRSCRRRLAGHN RRRK
Sbjct: 174 DEGKRSCRRRLAGHNRRRRK 193
>sp|P93015|SPL3_ARATH Squamosa promoter-binding-like protein 3
OS=Arabidopsis thaliana GN=SPL3 PE=1 SV=2
Length = 131
Score = 42.7 bits (99), Expect = 7e-04
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRK 296
D+ KRSCRRRLAGHNERRRK
Sbjct: 108 DEAKRSCRRRLAGHNERRRK 127
>sp|Q6Z461|SPL13_ORYSJ Squamosa promoter-binding-like protein 13
OS=Oryza sativa subsp. japonica GN=SPL13 PE=2 SV=1
Length = 216
Score = 42.7 bits (99), Expect = 7e-04
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKPSLLSTRYG 269
D KRSCRRRLAGHNERRRK S T +G
Sbjct: 164 DDAKRSCRRRLAGHNERRRK-SAADTAHG 191
>sp|Q653Z5|SPL11_ORYSJ Squamosa promoter-binding-like protein 11
OS=Oryza sativa subsp. japonica GN=SPL11 PE=2 SV=1
Length = 343
Score = 42.7 bits (99), Expect = 7e-04
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKP--SLLSTRYGTVSSSIFEN 242
DQ KRSCRRRL+ HN RRRKP + + GT+ S+F++
Sbjct: 121 DQEKRSCRRRLSDHNARRRKPQTDVFAFGSGTLPRSLFDD 160
>sp|Q8LFW6|SPL13_ARATH Squamosa promoter-binding-like protein 13
OS=Arabidopsis thaliana GN=SPL13 PE=2 SV=2
Length = 359
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3
Query: 355 DQGKRSCRRRLAGHNERRRKP 293
D+GKRSCR+RL GHN RRRKP
Sbjct: 155 DEGKRSCRKRLDGHNRRRRKP 175
