miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O75570|RF1M_HUMAN Peptide chain release factor 1, mitochondrial
OS=Homo sapiens GN=MTRF1 PE=1 SV=2
Length = 445
Score = 79.7 bits (195), Expect = 5e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 2 SLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDM 115
SLVPKEKYDKNDVILEVT+GRTTGGDICQQFTREIFDM
Sbjct: 173 SLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDM 210
>sp|Q3MHI7|RF1M_BOVIN Peptide chain release factor 1, mitochondrial
OS=Bos taurus GN=MTRF1 PE=2 SV=1
Length = 447
Score = 79.7 bits (195), Expect = 5e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 2 SLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDM 115
SL+PKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDM
Sbjct: 175 SLLPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDM 212
>sp|Q8K126|RF1M_MOUSE Peptide chain release factor 1, mitochondrial
OS=Mus musculus GN=Mtrf1 PE=2 SV=1
Length = 446
Score = 74.3 bits (181), Expect = 2e-13
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 5 LVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDM 115
LVPKEKYD +DVILEVTSGRTTGGDICQQFTREIFDM
Sbjct: 175 LVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDM 211
>sp|Q2KI15|RF1ML_BOVIN Peptide chain release factor 1-like,
mitochondrial OS=Bos taurus GN=MTRF1L PE=2 SV=1
Length = 380
Score = 43.9 bits (102), Expect = 3e-04
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +2
Query: 5 LVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDM 115
LVP E+ DKND+ILEVT+G GG FT EIFDM
Sbjct: 118 LVPSEETDKNDLILEVTAG--VGGQEAMLFTSEIFDM 152
>sp|Q9UGC7|RF1ML_HUMAN Peptide chain release factor 1-like,
mitochondrial OS=Homo sapiens GN=MTRF1L PE=1 SV=1
Length = 380
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +2
Query: 5 LVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDM 115
LVP E+ D+ND+ILEVT+G GG FT EIFDM
Sbjct: 118 LVPSEETDENDLILEVTAG--VGGQEAMLFTSEIFDM 152
