miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q5R8E5|CLD10_PONAB Claudin-10 OS=Pongo abelii GN=CLDN10 PE=2
SV=1
Length = 228
Score = 77.4 bits (189), Expect = 3e-14
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 3 SIFALFGMKCTKVGGSDKAKAKMACLAGIVFILSGLCS 116
SIFALFGMKCTKVGGSDKAKAK+ACLAGIVFILSGLCS
Sbjct: 94 SIFALFGMKCTKVGGSDKAKAKIACLAGIVFILSGLCS 131
>sp|P78369|CLD10_HUMAN Claudin-10 OS=Homo sapiens GN=CLDN10 PE=1
SV=2
Length = 228
Score = 77.4 bits (189), Expect = 3e-14
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 3 SIFALFGMKCTKVGGSDKAKAKMACLAGIVFILSGLCS 116
SIFALFGMKCTKVGGSDKAKAK+ACLAGIVFILSGLCS
Sbjct: 94 SIFALFGMKCTKVGGSDKAKAKIACLAGIVFILSGLCS 131
>sp|Q9Z0S6|CL10A_MOUSE Claudin-10A OS=Mus musculus GN=Cldn10a PE=2
SV=1
Length = 231
Score = 75.9 bits (185), Expect = 8e-14
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +3
Query: 3 SIFALFGMKCTKVGGSDKAKAKMACLAGIVFILSGLCS 116
SIFALFGMKCTKVGGSD+AKAK+ACLAGIVFILSGLCS
Sbjct: 94 SIFALFGMKCTKVGGSDQAKAKIACLAGIVFILSGLCS 131
>sp|Q5E9L0|CLD10_BOVIN Claudin-10 OS=Bos taurus GN=CLDN10 PE=2 SV=1
Length = 231
Score = 75.1 bits (183), Expect = 1e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 3 SIFALFGMKCTKVGGSDKAKAKMACLAGIVFILSGLCS 116
SIFAL GMKCTKVGGSDKAKAK+ACLAGIVFILSGLCS
Sbjct: 94 SIFALIGMKCTKVGGSDKAKAKIACLAGIVFILSGLCS 131
>sp|Q9Z261|CLD7_MOUSE Claudin-7 OS=Mus musculus GN=Cldn7 PE=1 SV=1
Length = 211
Score = 43.1 bits (100), Expect = 5e-04
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 12 ALFGMKCTKVGGSDKA-KAKMACLAGIVFILSGLCS 116
A GMKCT+ GG DKA KA++A GIVFI++GL +
Sbjct: 98 ATMGMKCTRCGGDDKAKKARIAMTGGIVFIVAGLAA 133
