miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5
OS=Arabidopsis thaliana GN=NFYA5 PE=2 SV=1
Length = 308
Score = 60.1 bits (144), Expect(2) = 1e-12
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -2
Query: 445 KAILHESRHLHALNRVRGSGGRFLSTKKLQEPDSTSNAGCHSVSGSG 305
K LHESRHLHAL R RGSGGRFL+TKKLQE +SN+ C S +G
Sbjct: 211 KPYLHESRHLHALKRARGSGGRFLNTKKLQE---SSNSLCSSQMANG 254
Score = 32.3 bits (72), Expect(2) = 1e-12
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -3
Query: 483 AKMEAQNKLVKARKPY 436
AK+EAQNKL+K RKPY
Sbjct: 198 AKLEAQNKLIKCRKPY 213
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6
OS=Arabidopsis thaliana GN=NFYA6 PE=2 SV=1
Length = 308
Score = 57.0 bits (136), Expect(2) = 1e-11
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2
Query: 445 KAILHESRHLHALNRVRGSGGRFLSTKKLQEPDST 341
K LHESRHLHAL RVRGSGGRFL+TKK QE +S+
Sbjct: 204 KPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSS 238
Score = 32.3 bits (72), Expect(2) = 1e-11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -3
Query: 483 AKMEAQNKLVKARKPY 436
AK+EAQNKL+K RKPY
Sbjct: 191 AKLEAQNKLIKVRKPY 206
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8
OS=Arabidopsis thaliana GN=NFYA8 PE=2 SV=2
Length = 328
Score = 54.3 bits (129), Expect(2) = 2e-11
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -2
Query: 445 KAILHESRHLHALNRVRGSGGRFLSTKKLQE 353
K LHESRH+HAL R RGSGGRFL+TKKLQE
Sbjct: 205 KPYLHESRHVHALKRPRGSGGRFLNTKKLQE 235
Score = 33.9 bits (76), Expect(2) = 2e-11
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -3
Query: 483 AKMEAQNKLVKARKPY 436
AK+EAQNKL+KARKPY
Sbjct: 192 AKLEAQNKLIKARKPY 207
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3
OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2
Length = 340
Score = 55.1 bits (131), Expect(2) = 3e-11
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -2
Query: 445 KAILHESRHLHALNRVRGSGGRFLSTKK-LQEPDSTSNAGCHSVSGSGHFHQKGDTTEYE 269
K LHESRH+HAL R RGSGGRFL+TKK LQE + + ++K + + +E
Sbjct: 212 KPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQEQDKLGQQVNRKTNMSRFE 271
Query: 268 VHQSDTGKFVAXXXXXXXXXXXXXXXVLFRQPEHRFSG 155
H K + +F E +FSG
Sbjct: 272 AHMLQNNKDRSSTTSGSDITSVSDGADIFGHTEFQFSG 309
Score = 32.7 bits (73), Expect(2) = 3e-11
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = -3
Query: 483 AKMEAQNKLVKARKPY 436
AK+EAQNKL++ARKPY
Sbjct: 199 AKLEAQNKLIRARKPY 214
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7
OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1
Length = 190
Score = 47.8 bits (112), Expect(2) = 5e-08
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = -2
Query: 454 QSPKAILHESRHLHALNRVRGSGGRFLSTKKLQEPDSTSN 335
+S K LHESRHLHA+ R RG GGRFL+ KK E S+
Sbjct: 130 KSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSS 169
Score = 29.3 bits (64), Expect(2) = 5e-08
Identities = 10/16 (62%), Positives = 16/16 (100%)
Frame = -3
Query: 483 AKMEAQNKLVKARKPY 436
A++E+QNK++K+RKPY
Sbjct: 120 ARLESQNKVIKSRKPY 135
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4
OS=Arabidopsis thaliana GN=NFYA4 PE=2 SV=1
Length = 198
Score = 47.4 bits (111), Expect(2) = 1e-07
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Frame = -2
Query: 454 QSPKAILHESRHLHALNRVRGSGGRFLSTKK-----LQEPDSTSNAGCHSVSGS 308
++ K +HESRHLHA+ R RG GGRFL+ KK +E ++TS+ S S
Sbjct: 128 KAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEEATSDENTSEASSS 181
Score = 28.1 bits (61), Expect(2) = 1e-07
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -3
Query: 483 AKMEAQNKLVKARKPY 436
AK+EA+N+ +KA+KPY
Sbjct: 118 AKLEARNRAIKAKKPY 133
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2
OS=Arabidopsis thaliana GN=NFYA2 PE=2 SV=1
Length = 295
Score = 48.9 bits (115), Expect = 1e-05
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -2
Query: 445 KAILHESRHLHALNRVRGSGGRFLSTKKLQEPDSTSNAGCHSVSGSG 305
K +H SRHLHAL R RGSGGRFL+TK + N+G ++ G G
Sbjct: 173 KPYMHHSRHLHALRRPRGSGGRFLNTKS----QNLENSGTNAKKGDG 215
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10
OS=Arabidopsis thaliana GN=NFYA10 PE=2 SV=2
Length = 269
Score = 47.4 bits (111), Expect = 4e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = -2
Query: 466 EQTCQSPKAILHESRHLHALNRVRGSGGRFLSTKKLQEPDSTSNAGCHSVSGSGHFHQKG 287
E+ + K +H SRHLHA+ R RGSGGRFL+TK D+ + + S FH +
Sbjct: 157 EKLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTK---TADAAKQSKPSNSQSSEVFHPEN 213
Query: 286 DT 281
+T
Sbjct: 214 ET 215
