miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q80ZF0|CORA1_RAT Collagen alpha-1(XXVII) chain OS=Rattus
norvegicus GN=Col27a1 PE=2 SV=1
Length = 1855
Score = 75.1 bits (183), Expect = 1e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGT 99
QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGT
Sbjct: 1242 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGT 1274
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G+ GQ+GA G +G+ G G +GIPG GPPG
Sbjct: 1087 GQPGQQGAAGERGHSGAKGFLGIPGPSGPPG 1117
>sp|Q8IZC6|CORA1_HUMAN Collagen alpha-1(XXVII) chain OS=Homo sapiens
GN=COL27A1 PE=1 SV=1
Length = 1860
Score = 70.9 bits (172), Expect = 2e-12
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGT 99
QGEKG+ GAKGAKGYQGQLGEMG+PGDPGPPGT
Sbjct: 1248 QGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGT 1280
>sp|Q5QNQ9|CORA1_MOUSE Collagen alpha-1(XXVII) chain OS=Mus musculus
GN=Col27a1 PE=2 SV=1
Length = 1845
Score = 69.3 bits (168), Expect = 7e-12
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGT 99
QGEKGQRGAKGAKG+QG LGEMGIPG+PGPPGT
Sbjct: 1233 QGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGT 1265
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G+ GQ+GA G +G+ G G +GIPG GPPG
Sbjct: 1078 GQPGQQGAAGERGHSGAKGFLGIPGPSGPPG 1108
>sp|Q02388|CO7A1_HUMAN Collagen alpha-1(VII) chain OS=Homo sapiens
GN=COL7A1 PE=1 SV=2
Length = 2944
Score = 47.4 bits (111), Expect = 3e-05
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
GE+G+RG KG +G QG+ G G+PG PGPPG
Sbjct: 2058 GERGERGEKGERGEQGRDGPPGLPGTPGPPG 2088
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGT 99
QGEKG+RG G G+ G G G G PGPPG+
Sbjct: 2697 QGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGS 2729
>sp|Q63870|CO7A1_MOUSE Collagen alpha-1(VII) chain OS=Mus musculus
GN=Col7a1 PE=2 SV=3
Length = 2944
Score = 46.2 bits (108), Expect = 6e-05
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
GE+G+RG KG +G QG+ G G+PG PGPPG
Sbjct: 2052 GERGERGEKGERGDQGRDGLPGLPGPPGPPG 2082
>sp|P13942|COBA2_HUMAN Collagen alpha-2(XI) chain OS=Homo sapiens
GN=COL11A2 PE=1 SV=4
Length = 1736
Score = 45.4 bits (106), Expect = 1e-04
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QGEKG RG G +G GQ GEMGIPG GP G
Sbjct: 1425 QGEKGDRGLPGPQGSPGQKGEMGIPGASGPIG 1456
Score = 43.1 bits (100), Expect = 5e-04
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G +G+ G KG +G +G+ GE G PG+PGPPG
Sbjct: 1222 GIQGEPGVKGPRGERGEKGESGQPGEPGPPG 1252
>sp|P02458|CO2A1_HUMAN Collagen alpha-1(II) chain OS=Homo sapiens
GN=COL2A1 PE=1 SV=3
Length = 1487
Score = 45.4 bits (106), Expect = 1e-04
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G++G +G KGA G +G+ GE G PG+PGPPG
Sbjct: 134 RGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPG 165
Score = 43.1 bits (100), Expect = 5e-04
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G+KG++GA G +G G+ G G PG PGPPG
Sbjct: 137 RGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPG 168
>sp|P02459|CO2A1_BOVIN Collagen alpha-1(II) chain OS=Bos taurus
GN=COL2A1 PE=1 SV=4
Length = 1487
Score = 45.4 bits (106), Expect = 1e-04
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G++G +G KGA G +G+ GE G PG+PGPPG
Sbjct: 134 RGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPG 165
Score = 43.1 bits (100), Expect = 5e-04
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G+KG++GA G +G G+ G G PG PGPPG
Sbjct: 137 RGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPG 168
>sp|Q4ZJM7|OTOL1_MOUSE Otolin-1 OS=Mus musculus GN=Otol1 PE=1 SV=2
Length = 482
Score = 44.3 bits (103), Expect = 2e-04
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QG KGQ+G KG KG +G G GIPG PG PG
Sbjct: 150 QGPKGQKGEKGLKGDRGDQGAGGIPGYPGKPG 181
>sp|A0MSJ1|CRA1B_DANRE Collagen alpha-1(XXVII) chain B OS=Danio rerio
GN=col27a1b PE=2 SV=1
Length = 1658
Score = 44.3 bits (103), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
GE+G+ G KG+KG+QGQLGEMG G+ G G
Sbjct: 1048 GERGKPGEKGSKGHQGQLGEMGALGEQGDTG 1078
>sp|Q30D77|COOA1_MOUSE Collagen alpha-1(XXIV) chain OS=Mus musculus
GN=Col24a1 PE=2 SV=1
Length = 1733
Score = 44.3 bits (103), Expect = 2e-04
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
GEKG+RG+ G G QG+ G MG PG PG PG
Sbjct: 889 GEKGERGSPGPLGPQGEKGVMGYPGPPGAPG 919
>sp|Q8BLX7|COGA1_MOUSE Collagen alpha-1(XVI) chain OS=Mus musculus
GN=Col16a1 PE=2 SV=2
Length = 1580
Score = 44.3 bits (103), Expect = 2e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+GE+G +G+ G KG QG G+ G PG PGPPG
Sbjct: 1116 RGERGPQGSSGEKGDQGFQGQPGFPGPPGPPG 1147
>sp|P05539|CO2A1_RAT Collagen alpha-1(II) chain OS=Rattus norvegicus
GN=Col2a1 PE=2 SV=2
Length = 1419
Score = 44.3 bits (103), Expect = 2e-04
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G++G +G +GA G +G+ GE G PG+PGPPG
Sbjct: 65 RGDRGDKGERGAPGPRGRDGEPGTPGNPGPPG 96
Score = 44.3 bits (103), Expect = 2e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G+KG+RGA G +G G+ G G PG PGPPG
Sbjct: 68 RGDKGERGAPGPRGRDGEPGTPGNPGPPGPPG 99
>sp|Q17RW2|COOA1_HUMAN Collagen alpha-1(XXIV) chain OS=Homo sapiens
GN=COL24A1 PE=2 SV=2
Length = 1714
Score = 43.9 bits (102), Expect = 3e-04
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
GEKG+RG+ G G QG+ G MG PG PG PG
Sbjct: 870 GEKGERGSPGPLGPQGEKGVMGYPGPPGVPG 900
>sp|A8TX70|CO6A5_HUMAN Collagen alpha-5(VI) chain OS=Homo sapiens
GN=COL6A5 PE=1 SV=1
Length = 2615
Score = 43.9 bits (102), Expect = 3e-04
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G+ G +G+ G++G GQ GE G PGDPG PG
Sbjct: 1487 KGDPGSQGSPGSRGAPGQYGEKGFPGDPGNPG 1518
>sp|Q6AZY7|SCAR3_HUMAN Scavenger receptor class A member 3 OS=Homo
sapiens GN=SCARA3 PE=2 SV=1
Length = 606
Score = 43.5 bits (101), Expect = 4e-04
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGT 99
G GQRGA G KG G G G+PG PGPPG+
Sbjct: 571 GSPGQRGAMGPKGEPGIQGPPGLPGPPGPPGS 602
>sp|A6QP79|COL12_BOVIN Collectin-12 OS=Bos taurus GN=COLEC12 PE=2
SV=1
Length = 742
Score = 43.5 bits (101), Expect = 4e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G G+RG+KG+KG QG G G PG PGP G
Sbjct: 491 GPPGERGSKGSKGLQGSKGSRGSPGKPGPQG 521
>sp|P39060|COIA1_HUMAN Collagen alpha-1(XVIII) chain OS=Homo sapiens
GN=COL18A1 PE=1 SV=5
Length = 1754
Score = 43.5 bits (101), Expect = 4e-04
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQ--LGEMGIPGDPGPPG 96
QG KG RG++G KG G+ +G+ G+PG PGPPG
Sbjct: 1092 QGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPG 1125
>sp|Q90584|COHA1_CHICK Collagen alpha-1(XVII) chain OS=Gallus gallus
GN=COL17A1 PE=2 SV=2
Length = 1495
Score = 43.5 bits (101), Expect = 4e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G KG +G KGA+G G+ G GIPG PG PG
Sbjct: 673 GPKGDQGEKGARGMTGEQGSRGIPGPPGEPG 703
>sp|Q8C850|SCAR3_MOUSE Scavenger receptor class A member 3 OS=Mus
musculus GN=Scara3 PE=2 SV=1
Length = 606
Score = 43.1 bits (100), Expect = 5e-04
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G GQRGA G KG G G G+PG PGPPG
Sbjct: 571 GSPGQRGATGPKGEPGIQGPPGLPGPPGPPG 601
>sp|Q86Y22|CONA1_HUMAN Collagen alpha-1(XXIII) chain OS=Homo sapiens
GN=COL23A1 PE=1 SV=1
Length = 540
Score = 43.1 bits (100), Expect = 5e-04
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QG KG GAKG KG G+ G G+PG GPPG
Sbjct: 429 QGPKGLDGAKGEKGASGERGPSGLPGPVGPPG 460
>sp|Q2LK54|COL12_CHICK Collectin-12 OS=Gallus gallus GN=COLEC12 PE=2
SV=1
Length = 742
Score = 43.1 bits (100), Expect = 5e-04
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIP---GDPGPPG 96
+G KG RG+ G+KG +G G+ G+P GDPGPPG
Sbjct: 496 KGGKGSRGSPGSKGQRGSPGKTGLPGPSGDPGPPG 530
>sp|Q07092|COGA1_HUMAN Collagen alpha-1(XVI) chain OS=Homo sapiens
GN=COL16A1 PE=1 SV=2
Length = 1604
Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+GE+G +G G KG QG G+ G PG PGPPG
Sbjct: 1137 RGERGPQGNSGEKGDQGFQGQPGFPGPPGPPG 1168
>sp|Q05707|COEA1_HUMAN Collagen alpha-1(XIV) chain OS=Homo sapiens
GN=COL14A1 PE=1 SV=3
Length = 1796
Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G KGQ+G G KG G GE+G+PG GPPG
Sbjct: 1473 RGPKGQQGEPGPKGPDGPRGEIGLPGPQGPPG 1504
>sp|Q64739|COBA2_MOUSE Collagen alpha-2(XI) chain OS=Mus musculus
GN=Col11a2 PE=2 SV=3
Length = 1736
Score = 43.1 bits (100), Expect = 5e-04
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QGEKG RG G +G GQ GE GIPG GP G
Sbjct: 1425 QGEKGDRGLPGPQGSPGQKGETGIPGASGPIG 1456
>sp|Q32S24|COBA2_BOVIN Collagen alpha-2(XI) chain OS=Bos taurus
GN=COL11A2 PE=3 SV=1
Length = 1736
Score = 43.1 bits (100), Expect = 5e-04
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QGEKG RG G +G GQ GE GIPG GP G
Sbjct: 1425 QGEKGDRGLPGPQGSTGQKGETGIPGASGPIG 1456
>sp|P15988|CO6A2_CHICK Collagen alpha-2(VI) chain OS=Gallus gallus
GN=COL6A2 PE=2 SV=1
Length = 1022
Score = 43.1 bits (100), Expect = 5e-04
Identities = 20/31 (64%), Positives = 20/31 (64%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G KG RG G KG QG GE G PGDPGP G
Sbjct: 534 GPKGGRGELGPKGTQGTKGEKGEPGDPGPRG 564
>sp|Q91717|CO2A1_XENLA Collagen alpha-1(II) chain OS=Xenopus laevis
GN=col2a1 PE=2 SV=2
Length = 1486
Score = 43.1 bits (100), Expect = 5e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+GE+G +G KGA G +G+ GE G PG+PGP G
Sbjct: 139 RGERGDKGEKGAPGPRGRDGEPGTPGNPGPVG 170
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+GE G GA+G +G QG GE G PG PGP G
Sbjct: 376 KGEAGPTGARGPEGAQGPRGESGTPGSPGPAG 407
>sp|A6NHN0|OTOL1_HUMAN Otolin-1 OS=Homo sapiens GN=OTOL1 PE=3 SV=1
Length = 477
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G +G RG KG KG +G+ G+ G+PG PG PG
Sbjct: 140 GPQGPRGYKGEKGLKGERGDQGVPGYPGKPG 170
>sp|Q810Y4|CONA1_RAT Collagen alpha-1(XXIII) chain OS=Rattus
norvegicus GN=Col23a1 PE=1 SV=1
Length = 532
Score = 42.7 bits (99), Expect = 7e-04
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QG KG GAKG KG G+ G G+PG GPPG
Sbjct: 421 QGPKGLDGAKGEKGASGERGPHGLPGPVGPPG 452
>sp|Q8K4G2|CONA1_MOUSE Collagen alpha-1(XXIII) chain OS=Mus musculus
GN=Col23a1 PE=2 SV=2
Length = 532
Score = 42.7 bits (99), Expect = 7e-04
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QG KG GAKG KG G+ G G+PG GPPG
Sbjct: 421 QGPKGLDGAKGEKGTSGERGPHGLPGPVGPPG 452
>sp|Q4V885|COL12_RAT Collectin-12 OS=Rattus norvegicus GN=Colec12
PE=2 SV=1
Length = 742
Score = 42.7 bits (99), Expect = 7e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G G+RG+KG+KG QG G G PG PGP G
Sbjct: 491 GPPGERGSKGSKGSQGPKGSRGSPGKPGPQG 521
>sp|Q8K4Q8|COL12_MOUSE Collectin-12 OS=Mus musculus GN=Colec12 PE=1
SV=1
Length = 742
Score = 42.7 bits (99), Expect = 7e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G G+RG+KG+KG QG G G PG PGP G
Sbjct: 491 GPPGERGSKGSKGSQGPKGSRGSPGKPGPQG 521
>sp|Q5KU26|COL12_HUMAN Collectin-12 OS=Homo sapiens GN=COLEC12 PE=1
SV=3
Length = 742
Score = 42.7 bits (99), Expect = 7e-04
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGT 99
G G+RG KG+KG QG G G PG PGP G+
Sbjct: 491 GPPGERGGKGSKGSQGPKGSRGSPGKPGPQGS 522
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G KG +G KG++G G+ G G GDPGPPG
Sbjct: 499 KGSKGSQGPKGSRGSPGKPGPQGSSGDPGPPG 530
>sp|P32018|COEA1_CHICK Collagen alpha-1(XIV) chain OS=Gallus gallus
GN=COL14A1 PE=1 SV=2
Length = 1888
Score = 42.7 bits (99), Expect = 7e-04
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G KG RG G KG G GE+G+PG GPPG
Sbjct: 1483 RGAKGHRGDPGPKGPDGPRGEIGVPGPQGPPG 1514
>sp|Q05722|CO9A1_MOUSE Collagen alpha-1(IX) chain OS=Mus musculus
GN=Col9a1 PE=2 SV=2
Length = 921
Score = 42.7 bits (99), Expect = 7e-04
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
GE G++G KG +G QG+LGE+G G PGP G
Sbjct: 439 GEPGRQGHKGEEGDQGELGEVGAQGPPGPQG 469
>sp|Q29442|CO4A4_BOVIN Collagen alpha-4(IV) chain (Fragment) OS=Bos
taurus GN=COL4A4 PE=1 SV=1
Length = 453
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+GE G G+ G G++G +GE G PG PGPPG
Sbjct: 180 RGEDGLPGSPGPPGHKGDMGEAGCPGAPGPPG 211
>sp|P02461|CO3A1_HUMAN Collagen alpha-1(III) chain OS=Homo sapiens
GN=COL3A1 PE=1 SV=4
Length = 1466
Score = 42.7 bits (99), Expect = 7e-04
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+GE G+RGA G KG++G G G PG PGP G
Sbjct: 1094 KGETGERGAAGIKGHRGFPGNPGAPGSPGPAG 1125
>sp|P04258|CO3A1_BOVIN Collagen alpha-1(III) chain OS=Bos taurus
GN=COL3A1 PE=1 SV=1
Length = 1049
Score = 42.7 bits (99), Expect = 7e-04
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+GE G+RGA G KG++G G G PG PGP G
Sbjct: 938 KGETGERGAMGIKGHRGFPGNPGAPGSPGPAG 969
>sp|P30754|CAFF_RIFPA Fibril-forming collagen alpha chain (Fragment)
OS=Riftia pachyptila PE=1 SV=2
Length = 1027
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G++G RGA G++G G GE+G+PG PG PG
Sbjct: 685 GKRGLRGAGGSRGETGAQGEIGLPGSPGQPG 715
>sp|Q9BXS0|COPA1_HUMAN Collagen alpha-1(XXV) chain OS=Homo sapiens
GN=COL25A1 PE=1 SV=2
Length = 654
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QGE G RG KG+KG +G+ G+ G G GPPG
Sbjct: 387 QGESGTRGPKGSKGDRGEKGDSGAQGPRGPPG 418
>sp|P12108|CO9A2_CHICK Collagen alpha-2(IX) chain OS=Gallus gallus
GN=COL9A2 PE=1 SV=3
Length = 677
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
GE GQ+G +G KG G GE G+PG PGP G
Sbjct: 200 GEPGQQGKQGPKGDVGVSGEQGVPGPPGPQG 230
>sp|P27658|CO8A1_HUMAN Collagen alpha-1(VIII) chain OS=Homo sapiens
GN=COL8A1 PE=1 SV=2
Length = 744
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G G GAKG G +G++G MGIPG GPPG
Sbjct: 170 GAMGMPGAKGEIGQKGEIGPMGIPGPQGPPG 200
>sp|P12111|CO6A3_HUMAN Collagen alpha-3(VI) chain OS=Homo sapiens
GN=COL6A3 PE=1 SV=5
Length = 3177
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G G+RG KG +G +G+ G++GI GDPG PG
Sbjct: 2130 KGNPGRRGDKGPRGEKGERGDVGIRGDPGNPG 2161
>sp|P29400|CO4A5_HUMAN Collagen alpha-5(IV) chain OS=Homo sapiens
GN=COL4A5 PE=1 SV=2
Length = 1685
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QGE G+RG G G GQ G G+PGDPG PG
Sbjct: 291 QGEPGKRGKPGKDGENGQPGIPGLPGDPGYPG 322
>sp|Q28247|CO4A5_CANFA Collagen alpha-5(IV) chain OS=Canis
familiaris GN=COL4A5 PE=2 SV=2
Length = 1691
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
QGE G+RG G G GQ G G+PGDPG PG
Sbjct: 291 QGEPGKRGKPGKDGENGQPGIPGLPGDPGYPG 322
>sp|Q9QZR9|CO4A4_MOUSE Collagen alpha-4(IV) chain OS=Mus musculus
GN=Col4a4 PE=2 SV=1
Length = 1682
Score = 42.4 bits (98), Expect = 0.001
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 10 KGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
KG G G GY G++G++G+PG PGPPG
Sbjct: 358 KGVPGDPGPPGYYGEIGDVGLPGPPGPPG 386
>sp|P53420|CO4A4_HUMAN Collagen alpha-4(IV) chain OS=Homo sapiens
GN=COL4A4 PE=1 SV=3
Length = 1690
Score = 42.4 bits (98), Expect = 0.001
Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 6/37 (16%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEM------GIPGDPGPPG 96
G++G RGAKGA G G GEM G PG+PGPPG
Sbjct: 945 GDRGLRGAKGAIGPPGDEGEMAIISQKGTPGEPGPPG 981
>sp|P02462|CO4A1_HUMAN Collagen alpha-1(IV) chain OS=Homo sapiens
GN=COL4A1 PE=1 SV=3
Length = 1669
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +1
Query: 4 GEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
G KG RG GA GY G G GIPG GPPG
Sbjct: 88 GTKGTRGPPGASGYPGNPGLPGIPGQDGPPG 118
>sp|P08120|CO4A1_DROME Collagen alpha-1(IV) chain OS=Drosophila
melanogaster GN=Cg25C PE=2 SV=3
Length = 1779
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G+KG GA GAKG QG G G+PG PGP G
Sbjct: 653 KGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKG 684
>sp|Q6P4Z2|CO2A1_XENTR Collagen alpha-1(II) chain OS=Xenopus
tropicalis GN=col2a1 PE=2 SV=1
Length = 1492
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+GE G GA+G +G QG GE G PG PGP G
Sbjct: 379 KGEAGPTGARGPEGAQGPRGESGTPGSPGPAG 410
>sp|P28481|CO2A1_MOUSE Collagen alpha-1(II) chain OS=Mus musculus
GN=Col2a1 PE=1 SV=2
Length = 1487
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 1 QGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPG 96
+G++G +G KGA G +G+ GE G PG+PGP G
Sbjct: 133 RGDRGDKGEKGAPGPRGRDGEPGTPGNPGPAG 164
