miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q7Z6J2|GRASP_HUMAN General receptor for phosphoinositides
1-associated scaffold protein OS=Homo sapiens GN=GRASP
PE=1 SV=1
Length = 395
Score = 53.9 bits (128), Expect = 3e-07
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = -3
Query: 104 GPLRRKPKQKSFRRRILKFIPGLNRPLEEEESKL 3
GP RK K +SFRRR+LKFIPGLNR LEEEES+L
Sbjct: 362 GPGLRKTKYRSFRRRLLKFIPGLNRSLEEEESQL 395
>sp|Q8R4T5|GRASP_RAT General receptor for phosphoinositides
1-associated scaffold protein OS=Rattus norvegicus
GN=Grasp PE=1 SV=1
Length = 394
Score = 51.2 bits (121), Expect = 2e-06
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = -3
Query: 92 RKPKQKSFRRRILKFIPGLNRPLEEEESKL 3
RK K +SFRRR+LKFIPGLNR LEEEES+L
Sbjct: 365 RKTKYRSFRRRLLKFIPGLNRSLEEEESQL 394
>sp|Q9JJA9|GRASP_MOUSE General receptor for phosphoinositides
1-associated scaffold protein OS=Mus musculus GN=Grasp
PE=1 SV=2
Length = 392
Score = 51.2 bits (121), Expect = 2e-06
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = -3
Query: 92 RKPKQKSFRRRILKFIPGLNRPLEEEESKL 3
RK K +SFRRR+LKFIPGLNR LEEEES+L
Sbjct: 363 RKTKYRSFRRRLLKFIPGLNRSLEEEESQL 392
>sp|Q5I0L6|CYTIP_RAT Cytohesin-interacting protein OS=Rattus
norvegicus GN=Cytip PE=2 SV=1
Length = 359
Score = 43.1 bits (100), Expect = 5e-04
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -3
Query: 104 GPLRRKPKQKSFRRRILKFIPGLNRPLEEEESK 6
G L RK ++ S R++ILKFIPGL+R +EEEES+
Sbjct: 326 GTLPRKSRRGSVRKQILKFIPGLHRAVEEEESR 358
>sp|Q91VY6|CYTIP_MOUSE Cytohesin-interacting protein OS=Mus musculus
GN=Cytip PE=2 SV=1
Length = 359
Score = 43.1 bits (100), Expect = 5e-04
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -3
Query: 104 GPLRRKPKQKSFRRRILKFIPGLNRPLEEEESK 6
G L RK ++ S R++ILKFIPGL+R +EEEES+
Sbjct: 326 GTLPRKSRRGSVRKQILKFIPGLHRAVEEEESR 358
>sp|O60759|CYTIP_HUMAN Cytohesin-interacting protein OS=Homo sapiens
GN=CYTIP PE=1 SV=2
Length = 359
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = -3
Query: 104 GPLRRKPKQKSFRRRILKFIPGLNRPLEEEESK 6
G L RK ++ S R+++LKFIPGL+R +EEEES+
Sbjct: 326 GTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESR 358
