miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q63734|KCNC4_RAT Potassium voltage-gated channel subfamily C
member 4 OS=Rattus norvegicus GN=Kcnc4 PE=1 SV=1
Length = 625
Score = 54.7 bits (130), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
KTWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 446 KTWSGMLVGALCALAGVLTIAMPVPV 471
>sp|Q8R1C0|KCNC4_MOUSE Potassium voltage-gated channel subfamily C
member 4 OS=Mus musculus GN=Kcnc4 PE=2 SV=1
Length = 628
Score = 54.7 bits (130), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
KTWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 449 KTWSGMLVGALCALAGVLTIAMPVPV 474
>sp|Q03721|KCNC4_HUMAN Potassium voltage-gated channel subfamily C
member 4 OS=Homo sapiens GN=KCNC4 PE=1 SV=2
Length = 635
Score = 54.7 bits (130), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
KTWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 445 KTWSGMLVGALCALAGVLTIAMPVPV 470
>sp|Q01956|KCNC3_RAT Potassium voltage-gated channel subfamily C
member 3 OS=Rattus norvegicus GN=Kcnc3 PE=2 SV=1
Length = 889
Score = 54.7 bits (130), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
KTWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 513 KTWSGMLVGALCALAGVLTIAMPVPV 538
>sp|Q14003|KCNC3_HUMAN Potassium voltage-gated channel subfamily C
member 3 OS=Homo sapiens GN=KCNC3 PE=1 SV=3
Length = 757
Score = 54.7 bits (130), Expect = 2e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
KTWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 512 KTWSGMLVGALCALAGVLTIAMPVPV 537
>sp|Q63959|KCNC3_MOUSE Potassium voltage-gated channel subfamily C
member 3 OS=Mus musculus GN=Kcnc3 PE=2 SV=1
Length = 769
Score = 53.1 bits (126), Expect = 5e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
KTWSGM+VG LCALAGVLTIAMPVPV
Sbjct: 512 KTWSGMLVGGLCALAGVLTIAMPVPV 537
>sp|P22462|KCNC2_RAT Potassium voltage-gated channel subfamily C
member 2 OS=Rattus norvegicus GN=Kcnc2 PE=1 SV=1
Length = 638
Score = 53.1 bits (126), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
+TWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 446 QTWSGMLVGALCALAGVLTIAMPVPV 471
>sp|Q14B80|KCNC2_MOUSE Potassium voltage-gated channel subfamily C
member 2 OS=Mus musculus GN=Kcnc2 PE=1 SV=1
Length = 642
Score = 53.1 bits (126), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
+TWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 450 QTWSGMLVGALCALAGVLTIAMPVPV 475
>sp|Q96PR1|KCNC2_HUMAN Potassium voltage-gated channel subfamily C
member 2 OS=Homo sapiens GN=KCNC2 PE=1 SV=1
Length = 638
Score = 53.1 bits (126), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
+TWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 446 QTWSGMLVGALCALAGVLTIAMPVPV 471
>sp|P25122|KCNC1_RAT Potassium voltage-gated channel subfamily C
member 1 OS=Rattus norvegicus GN=Kcnc1 PE=2 SV=1
Length = 585
Score = 53.1 bits (126), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
+TWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 409 QTWSGMLVGALCALAGVLTIAMPVPV 434
>sp|P15388|KCNC1_MOUSE Potassium voltage-gated channel subfamily C
member 1 OS=Mus musculus GN=Kcnc1 PE=2 SV=1
Length = 511
Score = 53.1 bits (126), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
+TWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 409 QTWSGMLVGALCALAGVLTIAMPVPV 434
>sp|P48547|KCNC1_HUMAN Potassium voltage-gated channel subfamily C
member 1 OS=Homo sapiens GN=KCNC1 PE=1 SV=1
Length = 511
Score = 53.1 bits (126), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
+TWSGM+VGALCALAGVLTIAMPVPV
Sbjct: 409 QTWSGMLVGALCALAGVLTIAMPVPV 434
>sp|P17972|KCNAW_DROME Potassium voltage-gated channel protein Shaw
OS=Drosophila melanogaster GN=Shaw PE=2 SV=1
Length = 498
Score = 47.0 bits (110), Expect = 4e-05
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +2
Query: 2 KTWSGMVVGALCALAGVLTIAMPVPV 79
KT+ GM VGALCALAGVLTIA+PVPV
Sbjct: 386 KTYIGMFVGALCALAGVLTIALPVPV 411
