miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q10LG8|TLP6_ORYSJ Tubby-like F-box protein 6 OS=Oryza sativa
subsp. japonica GN=TULP6 PE=2 SV=1
Length = 403
Score = 69.7 bits (169), Expect = 5e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACAGVCRSWR +TKEIV+ PE SGKLTFPIS+KQPGP
Sbjct: 82 ACAGVCRSWRGITKEIVRVPEASGKLTFPISLKQPGP 118
>sp|Q944S3|TLP5_ARATH Tubby-like F-box protein 5 OS=Arabidopsis
thaliana GN=TULP5 PE=2 SV=1
Length = 429
Score = 69.7 bits (169), Expect = 5e-12
Identities = 28/37 (75%), Positives = 35/37 (94%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACAGVC++WR++ K+IVKSPE SGKLTFP+S+KQPGP
Sbjct: 85 ACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGP 121
>sp|Q9ZP59|TLP1_ARATH Tubby-like F-box protein 1 OS=Arabidopsis
thaliana GN=TULP1 PE=2 SV=1
Length = 455
Score = 68.2 bits (165), Expect = 2e-11
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACA VCRSWR + KEIV+SPELSGK+TFP+S+KQPGP
Sbjct: 87 ACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGP 123
>sp|Q9SQU1|TLP9_ARATH Tubby-like F-box protein 9 OS=Arabidopsis
thaliana GN=TULP9 PE=1 SV=1
Length = 380
Score = 67.4 bits (163), Expect = 3e-11
Identities = 31/37 (83%), Positives = 32/37 (86%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACAGVCRSWRILTKEIV PE S KLTFPIS+KQ GP
Sbjct: 64 ACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGP 100
>sp|Q53PP5|TLP13_ORYSJ Tubby-like F-box protein 13 OS=Oryza sativa
subsp. japonica GN=TULP13 PE=2 SV=1
Length = 440
Score = 67.0 bits (162), Expect = 4e-11
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACAGVCR+WR + KEIVK+PEL GK+TFPIS++QPGP
Sbjct: 83 ACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGP 119
>sp|Q8H485|TLP11_ORYSJ Tubby-like F-box protein 11 OS=Oryza sativa
subsp. japonica GN=TULP11 PE=2 SV=1
Length = 406
Score = 65.9 bits (159), Expect = 8e-11
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACAGVCRSWR + +EIV++PE SG LTFPIS+KQPGP
Sbjct: 85 ACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPGP 121
>sp|Q8VY21|TLP3_ARATH Tubby-like F-box protein 3 OS=Arabidopsis
thaliana GN=TULP3 PE=2 SV=1
Length = 406
Score = 65.5 bits (158), Expect = 1e-10
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
+CAGVCR+WR + KEIV+ PELS KLTFPIS+KQPGP
Sbjct: 82 SCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGP 118
>sp|Q0WPY0|TLP6_ARATH Tubby-like F-box protein 6 OS=Arabidopsis
thaliana GN=TULP6 PE=2 SV=1
Length = 413
Score = 64.7 bits (156), Expect = 2e-10
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACA VC+SWR +TKE+VK PELSG +TFPIS++QPGP
Sbjct: 99 ACASVCKSWREMTKEVVKVPELSGLITFPISLRQPGP 135
>sp|Q69U54|TLP12_ORYSJ Tubby-like F-box protein 12 OS=Oryza sativa
subsp. japonica GN=TULP12 PE=2 SV=1
Length = 451
Score = 63.9 bits (154), Expect = 3e-10
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACA VCR+WR + K+IV+SPE+ GKLTFP+S+KQPGP
Sbjct: 89 ACAAVCRTWREICKDIVQSPEICGKLTFPVSLKQPGP 125
>sp|Q2QXB2|TLP14_ORYSJ Tubby-like F-box protein 14 OS=Oryza sativa
subsp. japonica GN=TULP14 PE=2 SV=1
Length = 445
Score = 62.8 bits (151), Expect = 7e-10
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACA VCR+WR + +EIVK+PE GK+TFP+S+KQPGP
Sbjct: 89 ACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGP 125
>sp|Q9FRH7|TLP10_ARATH Tubby-like F-box protein 10 OS=Arabidopsis
thaliana GN=TULP10 PE=1 SV=1
Length = 445
Score = 62.8 bits (151), Expect = 7e-10
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACA VCRSWR + +EIV PE+ GKLTFP+S+KQPGP
Sbjct: 89 ACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGP 125
>sp|Q6NPQ1|TLP11_ARATH Tubby-like F-box protein 11 OS=Arabidopsis
thaliana GN=TULP11 PE=2 SV=1
Length = 389
Score = 62.4 bits (150), Expect = 9e-10
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACAGVCR WR+L E V PE+S KLTFPIS+KQPGP
Sbjct: 70 ACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGP 106
>sp|Q6Z2G9|TLP5_ORYSJ Tubby-like F-box protein 5 OS=Oryza sativa
subsp. japonica GN=TULP5 PE=2 SV=1
Length = 428
Score = 60.8 bits (146), Expect = 3e-09
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACA VCRSWR +TKE+VK+ E G++TFPIS+KQPGP
Sbjct: 98 ACAAVCRSWREVTKEVVKTLEECGRITFPISLKQPGP 134
>sp|Q75HX5|TLP8_ORYSJ Tubby-like F-box protein 8 OS=Oryza sativa
subsp. japonica GN=TULP8 PE=2 SV=1
Length = 445
Score = 60.5 bits (145), Expect = 3e-09
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
+CA VC++WR + KEIV SPE GKLTFP+S+KQPGP
Sbjct: 89 SCAAVCKAWREMCKEIVLSPEFCGKLTFPLSLKQPGP 125
>sp|Q8GVE5|TLP2_ARATH Tubby-like F-box protein 2 OS=Arabidopsis
thaliana GN=TULP2 PE=2 SV=1
Length = 394
Score = 60.5 bits (145), Expect = 3e-09
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
+CA VC+SWR +T EIV+ PE GKLTFPIS+KQPGP
Sbjct: 78 SCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQPGP 114
>sp|Q7XSV4|TLP7_ORYSJ Tubby-like F-box protein 7 OS=Oryza sativa
subsp. japonica GN=TULP7 PE=2 SV=1
Length = 462
Score = 60.1 bits (144), Expect = 4e-09
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACA VC +WR + K+IV++PE GKLTFP+S+KQPGP
Sbjct: 86 ACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQPGP 122
>sp|O80699|TLP4_ARATH Putative Tubby-like protein 4 OS=Arabidopsis
thaliana GN=TULP4 PE=3 SV=1
Length = 265
Score = 58.5 bits (140), Expect = 1e-08
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
+C GVC++WR + KEIV PE+S K TFPIS+KQPGP
Sbjct: 28 SCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLKQPGP 64
>sp|Q8LJA9|TLP3_ORYSJ Tubby-like F-box protein 3 OS=Oryza sativa
subsp. japonica GN=TULP3 PE=2 SV=1
Length = 448
Score = 57.0 bits (136), Expect = 4e-08
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1
Query: 7 AGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
A VCR+WR + KE V SPE GKLTFP+S+KQPGP
Sbjct: 91 AAVCRTWREMCKETVLSPEFCGKLTFPVSIKQPGP 125
>sp|Q94DT9|TLP2_ORYSJ Tubby-like F-box protein 2 OS=Oryza sativa
subsp. japonica GN=TULP2 PE=2 SV=1
Length = 368
Score = 51.2 bits (121), Expect = 2e-06
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACA VCR WR + +V+ P SGK+TFP S+KQPGP
Sbjct: 81 ACASVCRRWRDVAVAVVQPPLESGKITFPSSLKQPGP 117
>sp|Q5QM27|TLP1_ORYSJ Tubby-like F-box protein 1 OS=Oryza sativa
subsp. japonica GN=TULP1 PE=2 SV=1
Length = 356
Score = 49.3 bits (116), Expect = 8e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
+CA VCR WR +V+ P SGK+TFP S+KQPGP
Sbjct: 65 SCACVCRRWRDAAVAVVRPPAESGKITFPSSLKQPGP 101
>sp|Q68Y48|TLP9_ORYSJ Tubby-like F-box protein 9 OS=Oryza sativa
subsp. japonica GN=TULP9 PE=2 SV=1
Length = 372
Score = 47.0 bits (110), Expect = 4e-05
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
ACA VCR WR +V+ P G++TFP S+KQPGP
Sbjct: 82 ACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGP 118
>sp|Q688Y7|TLP10_ORYSJ Tubby-like F-box protein 10 OS=Oryza sativa
subsp. japonica GN=TULP10 PE=2 SV=1
Length = 352
Score = 44.7 bits (104), Expect = 2e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 1 ACAGVCRSWRILTKEIVKSPELSGKLTFPISVKQPGP 111
+CA VCR WR +V+ SG++TFP S+KQPGP
Sbjct: 55 SCACVCRRWREAAAAVVRPLPESGRITFPSSLKQPGP 91
