miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q07342|FOXA2_DANRE Forkhead box protein A2 OS=Danio rerio
GN=foxa2 PE=2 SV=1
Length = 409
Score = 97.4 bits (241), Expect = 2e-20
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = -3
Query: 149 DAHLKPDHHYAFNHPFSINNLMSSEQQHHHKMDLKTYEQVMHYGYSSPM 3
+ HLKP+HHY+FNHPFSINNLMSSEQQ HHKMDLKTYEQVMHYGY SPM
Sbjct: 327 EGHLKPEHHYSFNHPFSINNLMSSEQQ-HHKMDLKTYEQVMHYGYGSPM 374
>sp|P32182|FOXA2_RAT Hepatocyte nuclear factor 3-beta OS=Rattus
norvegicus GN=Foxa2 PE=1 SV=1
Length = 458
Score = 95.5 bits (236), Expect = 9e-20
Identities = 46/59 (77%), Positives = 48/59 (81%), Gaps = 10/59 (16%)
Frame = -3
Query: 149 DAHLKPDHHYAFNHPFSINNLMSSEQQHH--------HKMDLKTYEQVMHY--GYSSPM 3
+AHLKP+HHYAFNHPFSINNLMSSEQQHH HKMDLKTYEQVMHY GY SPM
Sbjct: 361 EAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKTYEQVMHYPGGYGSPM 419
>sp|O42097|FOXA2_ORYLA Hepatocyte nuclear factor 3-beta OS=Oryzias
latipes GN=foxa2 PE=2 SV=1
Length = 415
Score = 94.4 bits (233), Expect = 2e-19
Identities = 44/50 (88%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = -3
Query: 149 DAHLKPDHHYAFNHPFSINNLMSSEQQHHHKMDLKTYEQVMHY-GYSSPM 3
+AHLKP+HHY+FNHPFSINNLMSSEQQ HHKMDLKTYEQVMHY GY SPM
Sbjct: 329 EAHLKPEHHYSFNHPFSINNLMSSEQQ-HHKMDLKTYEQVMHYSGYGSPM 377
>sp|Q9Y261|FOXA2_HUMAN Hepatocyte nuclear factor 3-beta OS=Homo
sapiens GN=FOXA2 PE=1 SV=1
Length = 457
Score = 94.0 bits (232), Expect = 3e-19
Identities = 45/58 (77%), Positives = 47/58 (81%), Gaps = 9/58 (15%)
Frame = -3
Query: 149 DAHLKPDHHYAFNHPFSINNLMSSEQQHH--------HKMDLKTYEQVMHY-GYSSPM 3
+AHLKP+HHYAFNHPFSINNLMSSEQQHH HKMDLK YEQVMHY GY SPM
Sbjct: 361 EAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGYGSPM 418
>sp|P35583|FOXA2_MOUSE Hepatocyte nuclear factor 3-beta OS=Mus
musculus GN=Foxa2 PE=1 SV=1
Length = 459
Score = 93.6 bits (231), Expect = 3e-19
Identities = 45/59 (76%), Positives = 47/59 (79%), Gaps = 10/59 (16%)
Frame = -3
Query: 149 DAHLKPDHHYAFNHPFSINNLMSSEQQHH--------HKMDLKTYEQVMHY--GYSSPM 3
+AHLKP+HHYAFNHPFSINNLMSSEQQHH HKMDLK YEQVMHY GY SPM
Sbjct: 362 EAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGGYGSPM 420
>sp|Q7T1R4|FOXA2_XENTR Forkhead box protein A2 OS=Xenopus tropicalis
GN=foxa2 PE=2 SV=1
Length = 434
Score = 90.1 bits (222), Expect = 4e-18
Identities = 43/59 (72%), Positives = 46/59 (77%), Gaps = 11/59 (18%)
Frame = -3
Query: 146 AHLKPDHHYAFNHPFSINNLMSSEQQ----------HHHKMDLKTYEQVMHY-GYSSPM 3
+HLKP+HHY+FNHPFSINNLMSSEQQ HHHKMDLK YEQVMHY GY SPM
Sbjct: 337 SHLKPEHHYSFNHPFSINNLMSSEQQHHHHHHHNHHHHHKMDLKAYEQVMHYSGYGSPM 395
>sp|P84961|FXA2B_XENLA Forkhead box protein A2-B OS=Xenopus laevis
GN=foxa2-b PE=2 SV=1
Length = 433
Score = 89.7 bits (221), Expect = 5e-18
Identities = 43/60 (71%), Positives = 46/60 (76%), Gaps = 12/60 (20%)
Frame = -3
Query: 146 AHLKPDHHYAFNHPFSINNLMSSEQ-----------QHHHKMDLKTYEQVMHY-GYSSPM 3
+HLKP+HHY+FNHPFSINNLMSSEQ QHHHKMDLK YEQVMHY GY SPM
Sbjct: 335 SHLKPEHHYSFNHPFSINNLMSSEQQHHHHHHHHNHQHHHKMDLKAYEQVMHYSGYGSPM 394
>sp|Q91765|FXA2A_XENLA Forkhead box protein A2-A OS=Xenopus laevis
GN=foxa2-a PE=1 SV=1
Length = 434
Score = 87.8 bits (216), Expect = 2e-17
Identities = 42/59 (71%), Positives = 45/59 (76%), Gaps = 11/59 (18%)
Frame = -3
Query: 146 AHLKPDHHYAFNHPFSINNLMSSEQQ----------HHHKMDLKTYEQVMHY-GYSSPM 3
+HLKP+HHY+FNHPFSINNLMSSEQQ HHHKMDLK YEQVMHY Y SPM
Sbjct: 337 SHLKPEHHYSFNHPFSINNLMSSEQQHHHHHHHNHHHHHKMDLKAYEQVMHYSSYGSPM 395
>sp|P35582|FOXA1_MOUSE Hepatocyte nuclear factor 3-alpha OS=Mus
musculus GN=Foxa1 PE=1 SV=2
Length = 468
Score = 63.2 bits (152), Expect = 5e-10
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -3
Query: 143 HLKPDHHYAFNHPFSINNLMSSEQQHHHKMDLKTYEQVMHY 21
HLK D HY+FNHPFSINNLMSS +Q HK+D K YEQ + Y
Sbjct: 383 HLKGDPHYSFNHPFSINNLMSSSEQ-QHKLDFKAYEQALQY 422
>sp|P55317|FOXA1_HUMAN Hepatocyte nuclear factor 3-alpha OS=Homo
sapiens GN=FOXA1 PE=1 SV=2
Length = 472
Score = 63.2 bits (152), Expect = 5e-10
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -3
Query: 143 HLKPDHHYAFNHPFSINNLMSSEQQHHHKMDLKTYEQVMHY 21
HLK D HY+FNHPFSINNLMSS +Q HK+D K YEQ + Y
Sbjct: 387 HLKGDPHYSFNHPFSINNLMSSSEQ-QHKLDFKAYEQALQY 426
>sp|P32315|FXA1B_XENLA Forkhead box protein A1-B OS=Xenopus laevis
GN=foxa1-b PE=2 SV=1
Length = 427
Score = 61.2 bits (147), Expect = 2e-09
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -3
Query: 143 HLKPDHHYAFNHPFSINNLMSSEQQHHHKMDLKTYEQVMHYGYSS 9
HLK D HY+FNHPFSINNLMSS +Q HK+D K YEQ + YSS
Sbjct: 342 HLKGDPHYSFNHPFSINNLMSSSEQ-QHKLDFKAYEQALQQ-YSS 384
>sp|Q6LD29|FXA1A_XENLA Forkhead box protein A1-A OS=Xenopus laevis
GN=foxa1-a PE=2 SV=2
Length = 429
Score = 61.2 bits (147), Expect = 2e-09
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -3
Query: 143 HLKPDHHYAFNHPFSINNLMSSEQQHHHKMDLKTYEQVMHYGYSS 9
HLK D HY+FNHPFSINNLMSS +Q HK+D K YEQ + YSS
Sbjct: 344 HLKGDPHYSFNHPFSINNLMSSSEQ-QHKLDFKAYEQALQQ-YSS 386
>sp|Q8AWH1|FOXA1_XENTR Forkhead box protein A1 OS=Xenopus tropicalis
GN=foxa1 PE=2 SV=1
Length = 428
Score = 61.2 bits (147), Expect = 2e-09
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -3
Query: 143 HLKPDHHYAFNHPFSINNLMSSEQQHHHKMDLKTYEQVMHYGYSS 9
HLK D HY+FNHPFSINNLMSS +Q HK+D K YEQ + YSS
Sbjct: 343 HLKGDPHYSFNHPFSINNLMSSSEQ-QHKLDFKAYEQALQQ-YSS 385
>sp|P23512|FOXA1_RAT Hepatocyte nuclear factor 3-alpha OS=Rattus
norvegicus GN=Foxa1 PE=1 SV=1
Length = 466
Score = 60.1 bits (144), Expect = 4e-09
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = -3
Query: 143 HLKPDHHYAFNHPFSINNLMSSEQQHHHKMDLKTYEQVMHY 21
HLK HY+FNHPFSINNLMSS +Q HK+D K YEQ + Y
Sbjct: 381 HLKGAPHYSFNHPFSINNLMSSSEQ-QHKLDFKAYEQALQY 420
