miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9I9A7|CDT1_XENLA DNA replication factor Cdt1 OS=Xenopus laevis
           GN=cdt1 PE=1 SV=2
          Length = 617

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +1

Query: 1   LTTAQEVLDRARSLMTPKMEKALANMALKTA 93
           LTTAQEVL +AR L+TPKMEKALAN+ALKTA
Sbjct: 430 LTTAQEVLSKARGLITPKMEKALANLALKTA 460




>sp|Q8R4E9|CDT1_MOUSE DNA replication factor Cdt1 OS=Mus musculus
           GN=Cdt1 PE=1 SV=1
          Length = 557

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = +1

Query: 1   LTTAQEVLDRARSLMTPKMEKALANMALKTA 93
           LTTAQEVL RARSLMTPKMEKAL+N+AL++A
Sbjct: 369 LTTAQEVLARARSLMTPKMEKALSNLALRSA 399




>sp|Q9H211|CDT1_HUMAN DNA replication factor Cdt1 OS=Homo sapiens
           GN=CDT1 PE=1 SV=3
          Length = 546

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/31 (67%), Positives = 29/31 (93%)
 Frame = +1

Query: 1   LTTAQEVLDRARSLMTPKMEKALANMALKTA 93
           LTTAQEVL RAR+L++P+MEKAL+ +AL++A
Sbjct: 357 LTTAQEVLARARNLISPRMEKALSQLALRSA 387