miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P26516|PSD7_MOUSE 26S proteasome non-ATPase regulatory subunit 7
OS=Mus musculus GN=Psmd7 PE=1 SV=2
Length = 321
Score = 69.7 bits (169), Expect = 5e-12
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -3
Query: 113 VYLASLIRSVVALHNLINNKISNRDAERKEGQEKEE 6
VYLASLIRSVVALHNLINNKI+NRDAE+KEGQEKEE
Sbjct: 260 VYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEE 295
>sp|P51665|PSD7_HUMAN 26S proteasome non-ATPase regulatory subunit 7
OS=Homo sapiens GN=PSMD7 PE=1 SV=2
Length = 324
Score = 69.7 bits (169), Expect = 5e-12
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -3
Query: 113 VYLASLIRSVVALHNLINNKISNRDAERKEGQEKEE 6
VYLASLIRSVVALHNLINNKI+NRDAE+KEGQEKEE
Sbjct: 260 VYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEE 295
>sp|Q3ZBD0|PSD7_BOVIN 26S proteasome non-ATPase regulatory subunit 7
OS=Bos taurus GN=PSMD7 PE=2 SV=1
Length = 322
Score = 68.6 bits (166), Expect = 1e-11
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -3
Query: 113 VYLASLIRSVVALHNLINNKISNRDAERKEGQEKEE 6
VYLASLIRSVVALHNLINNKI+NRDAE+KEGQEKE+
Sbjct: 260 VYLASLIRSVVALHNLINNKIANRDAEKKEGQEKED 295
>sp|P26270|PSD7_DROME 26S proteasome non-ATPase regulatory subunit 7
OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6
Length = 338
Score = 53.9 bits (128), Expect = 3e-07
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = -3
Query: 113 VYLASLIRSVVALHNLINNKISNRDAERKEGQEKE 9
VYLAS++RS++ALHNLINNK++NRDAE + KE
Sbjct: 263 VYLASMVRSIIALHNLINNKLANRDAEEGKSDSKE 297
>sp|Q8WZY4|RPN8_NEUCR 26S proteasome regulatory subunit rpn-8
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=rpn-8 PE=3 SV=1
Length = 352
Score = 47.0 bits (110), Expect = 4e-05
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 8/46 (17%)
Frame = -3
Query: 116 AVYLASLIRSVVALHNLINNKISNR------DAERKEGQ--EKEEG 3
A+YL+SLIR++ A H+LI NKI NR DA++KEG+ EK+EG
Sbjct: 280 AIYLSSLIRAITAFHDLIENKIQNRQQQEENDAKKKEGENGEKKEG 325
>sp|O24412|PSD7_ARATH Probable 26S proteasome non-ATPase regulatory
subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1
Length = 308
Score = 46.6 bits (109), Expect = 5e-05
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = -3
Query: 113 VYLASLIRSVVALHNLINNKISNRDAERKE 24
+YL+SLIRSV+ALHNLINNK+ N++ E+ E
Sbjct: 268 IYLSSLIRSVIALHNLINNKLLNKEHEKAE 297
>sp|Q54WI8|PSD7_DICDI 26S proteasome non-ATPase regulatory subunit 7
OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1
Length = 325
Score = 46.2 bits (108), Expect = 6e-05
Identities = 19/31 (61%), Positives = 28/31 (90%)
Frame = -3
Query: 119 AAVYLASLIRSVVALHNLINNKISNRDAERK 27
+ +YL+S+IRS++ALHNLI NK +NR+AE+K
Sbjct: 256 SVIYLSSMIRSIIALHNLIINKTANREAEKK 286
