miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9LF38|EDL1_ARATH EID1-like F-box protein 1 OS=Arabidopsis
thaliana GN=EDL1 PE=2 SV=1
Length = 293
Score = 87.0 bits (214), Expect = 3e-17
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = +3
Query: 3 VQIPGHFVYRTRFSRTSGKSFLLPQCRTDILYVSDPCEHLDXGDEG 140
VQIPGHFVYRTRFSRT G+S L PQCRTD+LYV DPCEHLD G+EG
Sbjct: 110 VQIPGHFVYRTRFSRTLGRSLLPPQCRTDVLYVCDPCEHLDQGEEG 155
>sp|Q9FLZ8|EDL2_ARATH EID1-like F-box protein 2 OS=Arabidopsis
thaliana GN=EDL2 PE=2 SV=1
Length = 249
Score = 83.2 bits (204), Expect = 5e-16
Identities = 39/47 (82%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 VQIPGHFVYRTRFSRTSGKSFLLPQCRT-DILYVSDPCEHLDXGDEG 140
VQI GHFV+RTRFSRTSG+SFL PQCRT DILYVSDPCEHLD G++G
Sbjct: 109 VQISGHFVHRTRFSRTSGRSFLPPQCRTDDILYVSDPCEHLDQGEDG 155
>sp|Q93ZT5|EDL3_ARATH EID1-like F-box protein 3 OS=Arabidopsis
thaliana GN=EDL3 PE=2 SV=1
Length = 272
Score = 55.1 bits (131), Expect = 1e-07
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +3
Query: 15 GHFVYRTRFSRTSGKSFLLPQCRTDILYVSDPCEHLDXGDE 137
GHF +RFS+TSG+ FL CR D+LY+SDPCEH G +
Sbjct: 128 GHFACESRFSKTSGRFFLPKNCRRDLLYMSDPCEHQAVGGD 168
