miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens
GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 63.2 bits (152), Expect = 5e-10
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = -3
Query: 191 LQMIDGAIQFTADNGRGPIFSSFKPKTTFSLCDGKWHRIQAVKAKNVVTVSVDG 30
L+++DG + F +NG G I ++++PKT LCDGKWH +QA K+K+ +T+ VDG
Sbjct: 2942 LELVDGKVLFHVNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDG 2995
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus
GN=Lama1 PE=1 SV=1
Length = 3084
Score = 59.7 bits (143), Expect = 6e-09
Identities = 23/54 (42%), Positives = 40/54 (74%)
Frame = -3
Query: 191 LQMIDGAIQFTADNGRGPIFSSFKPKTTFSLCDGKWHRIQAVKAKNVVTVSVDG 30
L+++DG + F +NG G I ++++P+ +LCDGKWH +QA K+K+ + ++VDG
Sbjct: 2951 LEIVDGKVLFHVNNGAGRITATYQPRAARALCDGKWHTLQAHKSKHRIVLTVDG 3004
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens
GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 47.4 bits (111), Expect = 3e-05
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -3
Query: 191 LQMIDGAIQFTADNGRGPIFSSFKPKTTFSLCDGKWHRIQAVKAKNVVTVSVDG 30
++MID + F DNG G + + LCDG+WH++ A K K+ + ++VDG
Sbjct: 2990 IEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 3043
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus
GN=Lama2 PE=1 SV=1
Length = 3106
Score = 43.5 bits (101), Expect = 4e-04
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = -3
Query: 191 LQMIDGAIQFTADNGRGPIFSSFKPKTTFSLCDGKWHRIQAVKAKNVVTVSVDG 30
++MID + F DNG G + + + +C+G+W+++ A K KN + + VDG
Sbjct: 2986 IEMIDEKLMFHVDNGAGRFTAIYDAEIPGHMCNGQWYKVTAKKIKNRLELVVDG 3039
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster
GN=LanA PE=1 SV=2
Length = 3712
Score = 42.7 bits (99), Expect = 7e-04
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -3
Query: 191 LQMIDGAIQFTADNGRGPIFSS-FKPKTTFSLCDGKWHRIQAVKAKNVVTVSVDGIFSPA 15
L+++D + FT I S+ +K S CDGK +QA+K+K V+ ++VD I S
Sbjct: 3584 LELVDNTLYFTVKTDLKNIVSTNYKLPNNESFCDGKTRNVQAIKSKFVINIAVDFISSNP 3643
Query: 14 AIG 6
+G
Sbjct: 3644 GVG 3646
>sp|Q16363|LAMA4_HUMAN Laminin subunit alpha-4 OS=Homo sapiens
GN=LAMA4 PE=1 SV=4
Length = 1823
Score = 42.4 bits (98), Expect = 0.001
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -3
Query: 191 LQMIDGAIQFTADNGRGPIFSSFKPKTTFSLCDGKWHRIQAVKAKNVVTVSVD 33
+ M +G + +NG +S PK SLCDG+WHRI ++ NVV + VD
Sbjct: 1698 VHMKNGQVIVKVNNGIRDFSTSVTPKQ--SLCDGRWHRITVIRDSNVVQLDVD 1748
