miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q8N8F4|YV027_HUMAN Uncharacterized protein FLJ39582 OS=Homo
sapiens PE=2 SV=2
Length = 165
Score = 61.2 bits (147), Expect = 2e-09
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +2
Query: 8 ESRSVAQAGVQWRDLGSLQAPPPGFTPFSRL 100
ESRSVAQAGVQWRDLGSLQ PPPGFTPF L
Sbjct: 72 ESRSVAQAGVQWRDLGSLQTPPPGFTPFGCL 102
>sp|Q8N7M2|ZN283_HUMAN Zinc finger protein 283 OS=Homo sapiens
GN=ZNF283 PE=2 SV=4
Length = 679
Score = 57.4 bits (137), Expect = 3e-08
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +2
Query: 8 ESRSVAQAGVQWRDLGSLQAPPPGFTPFSRL 100
ESRSVAQAGVQW DLGSLQAPPPGFT FS L
Sbjct: 2 ESRSVAQAGVQWCDLGSLQAPPPGFTLFSCL 32
>sp|Q68CZ1|FTM_HUMAN Protein fantom OS=Homo sapiens GN=RPGRIP1L PE=1
SV=2
Length = 1315
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = +3
Query: 3 RRSLALLPRLECSGAISAHCKLRLPGSRHSPASGGGGCSEPRSCHCTQPRSRL 161
++SLAL P L CS AISAHC RLPGS PAS +CH TQP ++
Sbjct: 1097 KQSLALSPGLGCSSAISAHCNFRLPGSSDFPASASQVDGITGACHHTQPSEKI 1149
>sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein encoded by
NCRNA00269 OS=Homo sapiens GN=NCRNA00269 PE=5 SV=1
Length = 174
Score = 52.8 bits (125), Expect = 7e-07
Identities = 27/48 (56%), Positives = 30/48 (62%)
Frame = +3
Query: 3 RRSLALLPRLECSGAISAHCKLRLPGSRHSPASGGGGCSEPRSCHCTQ 146
R SL LLPRLECSG ISAH LRL GS +SP S +CH T+
Sbjct: 72 RWSLTLLPRLECSGTISAHYNLRLLGSSNSPVSASQVAETTEACHHTR 119
>sp|Q6UX73|CP089_HUMAN UPF0764 protein C16orf89 OS=Homo sapiens
GN=C16orf89 PE=2 SV=2
Length = 402
Score = 50.1 bits (118), Expect = 4e-06
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +2
Query: 8 ESRSVAQAGVQWRDLGSLQAPPPGFTPFSRL 100
+SRSVAQAGVQWR+LGSLQ PPGF FS L
Sbjct: 319 DSRSVAQAGVQWRNLGSLQPLPPGFKQFSCL 349
>sp|Q8WTZ3|YS049_HUMAN Zinc finger protein ENSP00000375192 OS=Homo
sapiens PE=2 SV=1
Length = 238
Score = 47.0 bits (110), Expect = 4e-05
Identities = 24/46 (52%), Positives = 27/46 (58%)
Frame = +3
Query: 9 SLALLPRLECSGAISAHCKLRLPGSRHSPASGGGGCSEPRSCHCTQ 146
SL L P+LEC+GAIS HC LRL GS S AS +CH Q
Sbjct: 99 SLTLSPKLECNGAISVHCNLRLLGSSDSLASTSQAAGIAGACHHAQ 144
>sp|Q8IV13|CCNJL_HUMAN Cyclin-J-like protein OS=Homo sapiens
GN=CCNJL PE=2 SV=3
Length = 435
Score = 47.0 bits (110), Expect = 4e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +3
Query: 18 LLPRLECSGAISAHCKLRLPGSRHSPAS 101
L PRL+CSG ISAHC L LPGS +SPAS
Sbjct: 99 LSPRLKCSGMISAHCNLHLPGSSNSPAS 126
>sp|Q8N9N2|ASCC1_HUMAN Activating signal cointegrator 1 complex
subunit 1 OS=Homo sapiens GN=ASCC1 PE=1 SV=1
Length = 400
Score = 46.6 bits (109), Expect = 5e-05
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3
Query: 6 RSLALLPRLECSGAISAHCKLRLPGSRHSPAS 101
+S ALLPRLE + AISAHC L LPGS SPAS
Sbjct: 347 KSFALLPRLEYNDAISAHCNLCLPGSSDSPAS 378
>sp|Q5H9K5|ZMAT1_HUMAN Zinc finger matrin-type protein 1 OS=Homo
sapiens GN=ZMAT1 PE=2 SV=1
Length = 638
Score = 46.2 bits (108), Expect = 6e-05
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = +3
Query: 27 RLECSGAISAHCKLRLPGSRHSPAS 101
RLECSGAISAHC L LPGS SPAS
Sbjct: 8 RLECSGAISAHCSLHLPGSSDSPAS 32
>sp|P51957|NEK4_HUMAN Serine/threonine-protein kinase Nek4 OS=Homo
sapiens GN=NEK4 PE=1 SV=2
Length = 841
Score = 46.2 bits (108), Expect = 6e-05
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = +3
Query: 6 RSLALLPRLECSGAISAHCKLRLPGSRHSPASGGGGCSEPRSCHCTQ 146
+SLAL P+LECSG I AH LRL GS SPAS CH Q
Sbjct: 456 QSLALSPKLECSGTILAHSNLRLLGSSDSPASASRVAGITGVCHHAQ 502
>sp|Q96NF6|CH049_HUMAN Putative uncharacterized protein C8orf49
OS=Homo sapiens GN=C8orf49 PE=2 SV=1
Length = 230
Score = 45.4 bits (106), Expect = 1e-04
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = -1
Query: 93 ENGVNPGGGACSEPRSRHCTPAWAT 19
+N +NP G C EPRSRHCTPAW T
Sbjct: 30 DNRLNPEGRGCGEPRSRHCTPAWTT 54
>sp|Q5T7P6|TMM78_HUMAN Transmembrane protein 78 OS=Homo sapiens
GN=TMEM78 PE=2 SV=1
Length = 136
Score = 45.4 bits (106), Expect = 1e-04
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = +3
Query: 3 RRSLALLPRLECSGAISAHCKLRLPGSRHSPAS 101
R+ LAL PRLEC GAI HC L +PGS P S
Sbjct: 102 RQGLALSPRLECDGAIMIHCSLNIPGSSDPPTS 134
>sp|Q92918|M4K1_HUMAN Mitogen-activated protein kinase kinase kinase
kinase 1 OS=Homo sapiens GN=MAP4K1 PE=1 SV=1
Length = 833
Score = 45.4 bits (106), Expect = 1e-04
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +3
Query: 24 PRLECSGAISAHCKLRLPGSRHSPAS 101
PRLECSG IS HC L LPGS +SPAS
Sbjct: 798 PRLECSGTISPHCNLLLPGSSNSPAS 823
>sp|Q09FC8|ZN415_HUMAN Zinc finger protein 415 OS=Homo sapiens
GN=ZNF415 PE=2 SV=2
Length = 603
Score = 44.7 bits (104), Expect = 2e-04
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3
Query: 27 RLECSGAISAHCKLRLPGSRHSPAS 101
RLEC+GAISAHC LRLP S SPAS
Sbjct: 61 RLECNGAISAHCNLRLPDSNDSPAS 85
>sp|Q5TCQ9|MAGI3_HUMAN Membrane-associated guanylate kinase, WW and
PDZ domain-containing protein 3 OS=Homo sapiens GN=MAGI3
PE=1 SV=2
Length = 1506
Score = 44.7 bits (104), Expect = 2e-04
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 20 VAQAGVQWRDLGSLQAPPPGF 82
VAQAGVQW DLGSLQ PPPGF
Sbjct: 363 VAQAGVQWHDLGSLQPPPPGF 383
>sp|Q6ZWE1|CC066_HUMAN Putative uncharacterized protein C3orf66
OS=Homo sapiens GN=C3orf66 PE=5 SV=1
Length = 131
Score = 44.7 bits (104), Expect = 2e-04
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +2
Query: 8 ESRSVAQAGVQWRDLGSLQAPPPGFTPFSRL 100
ES SVAQAGVQW DLGSLQ PP F FS L
Sbjct: 67 ESCSVAQAGVQWCDLGSLQRLPPRFKRFSHL 97
>sp|Q96MD7|CI085_HUMAN Uncharacterized protein C9orf85 OS=Homo
sapiens GN=C9orf85 PE=1 SV=1
Length = 179
Score = 44.3 bits (103), Expect = 2e-04
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +3
Query: 9 SLALLPRLECSGAISAHCKLRLPGSRHSPAS 101
SL LLPRLECSG I AH LRLP S SPAS
Sbjct: 110 SLPLLPRLECSGRILAHHNLRLPCSSDSPAS 140
>sp|Q9BUA6|MYL10_HUMAN Myosin regulatory light chain 10 OS=Homo
sapiens GN=MYL10 PE=2 SV=2
Length = 226
Score = 43.9 bits (102), Expect = 3e-04
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 3 RRSLALLPRLECSGAISAHCKLRLPGSRHSPAS 101
+ SLAL PRLE +G ISAHC L L GS +SPAS
Sbjct: 56 KESLALSPRLERNGMISAHCNLCLTGSSNSPAS 88
>sp|Q96J02|ITCH_HUMAN E3 ubiquitin-protein ligase Itchy homolog
OS=Homo sapiens GN=ITCH PE=1 SV=2
Length = 903
Score = 43.1 bits (100), Expect = 5e-04
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +3
Query: 21 LPRLECSGAISAHCKLRLPGSRHSPAS-----GGGGCSEPRSCHCTQPRSRLCTPGWVTE 185
LPRLEC+ AISAHC L LPG SP S G G S+ ++ +R+ T G
Sbjct: 165 LPRLECNSAISAHCNLCLPGLSDSPISASRVAGFTGASQNDDGSRSKDETRVSTNGSDDP 224
Query: 186 QDSAS 200
+D+ +
Sbjct: 225 EDAGA 229
