miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein encoded by
NCRNA00269 OS=Homo sapiens GN=NCRNA00269 PE=5 SV=1
Length = 174
Score = 58.5 bits (140), Expect = 1e-08
Identities = 31/45 (68%), Positives = 33/45 (73%)
Frame = -1
Query: 415 FVSLVEIGLLYVGQDGLKLPTSGDPSGLASQSVGITGVSNRARPK 281
FV VE G +VGQ GLKL TSGDP ASQS GITGVS+ ARPK
Sbjct: 122 FVFSVETGFHHVGQAGLKLLTSGDPPASASQSAGITGVSHSARPK 166
Score = 54.7 bits (130), Expect = 2e-07
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 5 IIFVEIGXHCVARAGLKLLASSDPPALDSQSAGIIGLSHHA--QSAFIXLL 151
+ VE G H V +AGLKLL S DPPA SQSAGI G+SH A +S F+ LL
Sbjct: 123 VFSVETGFHHVGQAGLKLLTSGDPPASASQSAGITGVSHSARPKSCFLQLL 173
>sp|Q8N976|YG039_HUMAN Putative uncharacterized protein FLJ38264
OS=Homo sapiens PE=5 SV=1
Length = 141
Score = 55.5 bits (132), Expect = 1e-07
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = -1
Query: 415 FVSLVEIGLLYVGQDGLKLPTSGDPSGLASQSVGITGVSNRARPK-LGSYHQTTIG 251
FV LVE G +VG GL+L TS DP LAS+S GITG+S+RARP + Q T+G
Sbjct: 38 FVFLVETGFHHVGHAGLELLTSSDPPTLASRSAGITGMSHRARPHGISRGEQVTLG 93
Score = 52.8 bits (125), Expect = 7e-07
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +2
Query: 5 IIFVEIGXHCVARAGLKLLASSDPPALDSQSAGIIGLSHHAQ 130
+ VE G H V AGL+LL SSDPP L S+SAGI G+SH A+
Sbjct: 39 VFLVETGFHHVGHAGLELLTSSDPPTLASRSAGITGMSHRAR 80
>sp|Q3ZCU0|YK006_HUMAN Putative uncharacterized protein FLJ37770
OS=Homo sapiens PE=5 SV=1
Length = 254
Score = 50.8 bits (120), Expect = 3e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2
Query: 8 IFVEIGXHCVARAGLKLLASSDPPALDSQSAGIIGLSHHAQ 130
+ E H VA+AGL+LL S DPP L SQS+GII +SHHA+
Sbjct: 125 VLKETEPHYVAQAGLELLVSRDPPTLASQSSGIISMSHHAK 165
>sp|Q6VEP2|F138D_HUMAN Protein FAM138D OS=Homo sapiens GN=FAM138D
PE=2 SV=1
Length = 85
Score = 50.8 bits (120), Expect = 3e-06
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +2
Query: 2 LIIFVEIGXHCVARAGLKLLASSDPPALDSQSAGIIGLSH 121
+++ +E H VA+AGL+LLASSDPP L SQS GII +SH
Sbjct: 1 MLLTIETQSHYVAQAGLELLASSDPPTLASQSVGIIDMSH 40
>sp|Q9Y2Z0|SUGT1_HUMAN Suppressor of G2 allele of SKP1 homolog
OS=Homo sapiens GN=SUGT1 PE=1 SV=3
Length = 365
Score = 50.4 bits (119), Expect = 3e-06
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2
Query: 14 VEIGXHCVARAGLKLLASSDPPALDSQSAGIIG 112
+E G H V +AGL+LL SSDPPALDSQSAGI G
Sbjct: 110 IETGFHRVGQAGLQLLTSSDPPALDSQSAGITG 142
>sp|Q9P1C3|YN010_HUMAN Putative uncharacterized protein PRO2829
OS=Homo sapiens GN=PRO2829 PE=5 SV=1
Length = 46
Score = 49.3 bits (116), Expect = 8e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 123 WWLRPIIPALWESKAGGSLEARSLRPARAT 34
WWL P++ ALWE++ GGSLE RSLRPA T
Sbjct: 16 WWLMPVVLALWEAEVGGSLEVRSLRPAWPT 45
>sp|Q8WTZ3|YS049_HUMAN Zinc finger protein ENSP00000375192 OS=Homo
sapiens PE=2 SV=1
Length = 238
Score = 38.9 bits (89), Expect(2) = 9e-06
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +2
Query: 5 IIFVEIGXHCVARAGLKLLASSDPPALDSQSA 100
+ VE G H +AG +LL SSDPPAL SQSA
Sbjct: 148 VFLVETGFHHFDQAGFELLTSSDPPALASQSA 179
Score = 29.6 bits (65), Expect(2) = 9e-06
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 91 PKCWDYRSEPPCPV 132
PKCWDY+ EP PV
Sbjct: 180 PKCWDYKHEPLSPV 193
Score = 33.9 bits (76), Expect(2) = 3e-04
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1
Query: 415 FVSLVEIGLLYVGQDGLKLPTSGDPSGLASQS 320
FV LVE G + Q G +L TS DP LASQS
Sbjct: 147 FVFLVETGFHHFDQAGFELLTSSDPPALASQS 178
Score = 29.6 bits (65), Expect(2) = 3e-04
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -3
Query: 332 SLPKCWDYRREQPRPAQIGFL---SSNHYRRK 246
S PKCWDY+ E P + G + SNH K
Sbjct: 178 SAPKCWDYKHEPLSPVECGKVFNKLSNHTGEK 209
>sp|Q6VEP3|F138A_HUMAN Protein FAM138A/B/C/F OS=Homo sapiens
GN=FAM138A PE=2 SV=1
Length = 85
Score = 48.5 bits (114), Expect = 1e-05
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +2
Query: 2 LIIFVEIGXHCVARAGLKLLASSDPPALDSQSAGIIGLSH 121
+++ +E H VA+AGL+LLASSDPP SQS GII +SH
Sbjct: 1 MLLTIETKSHYVAQAGLELLASSDPPTSASQSVGIIDMSH 40
>sp|Q8N769|CN178_HUMAN Uncharacterized protein C14orf178 OS=Homo
sapiens GN=C14orf178 PE=2 SV=1
Length = 122
Score = 48.5 bits (114), Expect = 1e-05
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +2
Query: 17 EIGXHCVARAGLKLLASSDPPALDSQSAGIIGLSHHAQ 130
E+G H A+AGL+LL SS+PPA SQSAGI G+SH A+
Sbjct: 30 EMGSHYFAQAGLELLGSSNPPASASQSAGITGVSHCAR 67
>sp|Q96CB5|CH044_HUMAN Putative uncharacterized protein C8orf44
OS=Homo sapiens GN=C8orf44 PE=2 SV=2
Length = 159
Score = 48.1 bits (113), Expect = 2e-05
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = -2
Query: 126 AWWLRPIIPALWESKAGGSLEARSLRPARATQ*XPISTK 10
A WL P+IPALWE+KAG S E RS +PA T PI TK
Sbjct: 38 ARWLMPVIPALWEAKAGRSPEVRSSKPAWPTWRNPIFTK 76
>sp|Q04864|REL_HUMAN Proto-oncogene c-Rel OS=Homo sapiens GN=REL
PE=1 SV=1
Length = 619
Score = 45.1 bits (105), Expect(2) = 4e-05
Identities = 26/43 (60%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -1
Query: 403 VEIGLLYVGQDGLKLPTSGDPSGLASQSVGIT-GVSNRARPKL 278
VE G +V QDGL+L TSGDP LASQS GIT R RP L
Sbjct: 308 VETGFRHVDQDGLELLTSGDPPTLASQSAGITVNFPERPRPGL 350
Score = 21.2 bits (43), Expect(2) = 4e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -3
Query: 302 EQPRPAQIGFLSSNHYRRKK 243
E+PRP +G + Y +K+
Sbjct: 344 ERPRPGLLGSIGEGRYFKKE 363
>sp|Q9NRJ1|MOST1_HUMAN Protein MOST-1 OS=Homo sapiens GN=C8orf17
PE=1 SV=1
Length = 99
Score = 46.6 bits (109), Expect = 5e-05
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 129 WAWWLRPIIPALWESKAGGSLEARSLRPARAT 34
WA WL P+IPALW+++AGG E RS RPA T
Sbjct: 67 WARWLTPVIPALWKAEAGGLPELRSSRPAWTT 98
>sp|Q6B4Z3|UTY_PANTR Histone demethylase UTY OS=Pan troglodytes GN=UTY
PE=2 SV=1
Length = 1079
Score = 44.3 bits (103), Expect = 2e-04
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +2
Query: 8 IFVEIGXHCVARAGLKLLASSDPPALDSQSAGIIGLSHHAQ 130
IFVE G H V +A L+LL S A SQSAGI G+SHHA+
Sbjct: 1039 IFVETGFHHVGQAHLELLTSGGLLASASQSAGITGVSHHAR 1079
>sp|P08195|4F2_HUMAN 4F2 cell-surface antigen heavy chain OS=Homo
sapiens GN=SLC3A2 PE=1 SV=3
Length = 630
Score = 43.9 bits (102), Expect = 3e-04
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +2
Query: 14 VEIGXHCVARAGLKLLASSDPPALDSQSAGIIG 112
+E G CV +AGL+LLASSDPPAL S++A + G
Sbjct: 68 IETGSDCVTQAGLQLLASSDPPALASKNAEVTG 100
>sp|A6NHI5|YA005_HUMAN Transmembrane protein FLJ78588 OS=Homo
sapiens PE=2 SV=1
Length = 168
Score = 43.5 bits (101), Expect = 4e-04
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2
Query: 5 IIFVEIGXHCVARAGLKLLASSDPPALDSQSAGIIGLSHHAQS 133
I F+E + R L LLASSDPP L SQSAGI +++H QS
Sbjct: 119 IYFIETDLIMLPRVILDLLASSDPPTLVSQSAGITDVNYHTQS 161
>sp|O14628|ZN195_HUMAN Zinc finger protein 195 OS=Homo sapiens
GN=ZNF195 PE=1 SV=2
Length = 629
Score = 43.1 bits (100), Expect = 5e-04
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +2
Query: 17 EIGXHCVARAGLKLLASSDPPALDSQSAGIIGLSHHAQ 130
E+G H +A L+LL SSD PA SQSAGI G++H AQ
Sbjct: 76 EMGFHHATQACLELLGSSDLPASASQSAGITGVNHRAQ 113
