miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170
OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 74.7 bits (182), Expect = 3e-13
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = -1
Query: 445 HNWFYLVFMSFRGEDVHRSFLSHIQKEFQRKGIIPFIDEEINSE*SIGDQLLQAIRGSKI 266
++W Y VF SFRGEDV +FLSH+ KEF+ KGI+ F D+ I +IG +L AIR SKI
Sbjct: 7 NSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAIRESKI 66
Query: 265 AIILFS 248
+++LFS
Sbjct: 67 SVVLFS 72
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1
OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 67.0 bits (162), Expect = 5e-11
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = -1
Query: 433 YLVFMSFRGEDVHRSFLSHIQKEFQRKGIIPFIDEEINSE*SIGDQLLQAIRGSKIAIIL 254
Y VF SFRGEDV SFLSH+ KE + K I FID+EI SIG +LL AI+ S+IAI++
Sbjct: 12 YDVFPSFRGEDVRDSFLSHLLKELRGKA-ITFIDDEIERSRSIGPELLSAIKESRIAIVI 70
Query: 253 FS 248
FS
Sbjct: 71 FS 72
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana
glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 50.8 bits (120), Expect = 4e-06
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -1
Query: 439 WFYLVFMSFRGEDVHRSFLSHIQKEFQRKGIIPFIDEE-INSE*SIGDQLLQAIRGSKIA 263
W Y VF+SFRGED ++F SH+ + KGI F D++ + +I +L +AI S+ A
Sbjct: 10 WSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFA 69
Query: 262 IILFS 248
I++FS
Sbjct: 70 IVVFS 74
