miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q8S9L0|SPL10_ARATH Squamosa promoter-binding-like protein 10
OS=Arabidopsis thaliana GN=SPL10 PE=2 SV=2
Length = 396
Score = 82.0 bits (201), Expect = 1e-15
Identities = 48/85 (56%), Positives = 56/85 (65%), Gaps = 17/85 (20%)
Frame = +2
Query: 2 NTKSEETFT----------QIESGFTLSFQRGHGRPDEQVVAGSSRSLSPYQTSGGF--- 142
NT+SEE +T Q+ESGFTLSFQRG+G D Q+ GS+ S S +QTSGGF
Sbjct: 278 NTRSEEKYTWGTTYETKPTQMESGFTLSFQRGNGSED-QLFTGSTLSFSAFQTSGGFSAG 336
Query: 143 ----QLPSKGVGEYSGGLNESQDFY 205
QLP KGVGE SGGL+ES DFY
Sbjct: 337 KSNIQLPDKGVGECSGGLHESHDFY 361
>sp|Q9FZK0|SPL11_ARATH Squamosa promoter-binding-like protein 11
OS=Arabidopsis thaliana GN=SPL11 PE=2 SV=2
Length = 393
Score = 63.9 bits (154), Expect = 3e-10
Identities = 42/86 (48%), Positives = 49/86 (56%), Gaps = 18/86 (20%)
Frame = +2
Query: 2 NTKSEETFT-----------QIESGFTLSFQRGHGRPDEQVVAGSSRSLSPYQTSGG--- 139
N +SEE + Q E FTLSFQRG+G D Q+VA SSR S QTSGG
Sbjct: 277 NARSEEMYEWGNNTYDTKPRQTEKSFTLSFQRGNGSED-QLVASSSRMFSTSQTSGGFPA 335
Query: 140 ----FQLPSKGVGEYSGGLNESQDFY 205
FQL + VGEYSG L+ESQD +
Sbjct: 336 GKSKFQLHGEDVGEYSGVLHESQDIH 361
