miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9V3G1|RL8_DROME 60S ribosomal protein L8 OS=Drosophila
melanogaster GN=RpL8 PE=2 SV=1
Length = 256
Score = 63.9 bits (154), Expect = 3e-10
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GM+TGQFVYCGRKA LQIGNVMP+ QMPEGTI
Sbjct: 81 GMHTGQFVYCGRKATLQIGNVMPLSQMPEGTI 112
>sp|Q9U9L2|RL8_ANOGA 60S ribosomal protein L8 OS=Anopheles gambiae
GN=RpL8 PE=2 SV=2
Length = 261
Score = 63.9 bits (154), Expect = 3e-10
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GMYTGQFVYCGR+A LQIGNV+P+G MPEGTI
Sbjct: 81 GMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTI 112
>sp|Q95V39|RL8_SPOFR 60S ribosomal protein L8 OS=Spodoptera
frugiperda GN=RpL8 PE=2 SV=1
Length = 257
Score = 63.2 bits (152), Expect = 5e-10
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G+YTGQFVYCG+KA L++GNVMPVG MPEGTI
Sbjct: 81 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTI 112
>sp|Q6RYS3|RL8_MAMBR 60S ribosomal protein L8 OS=Mamestra brassicae
GN=RpL8 PE=2 SV=1
Length = 257
Score = 63.2 bits (152), Expect = 5e-10
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G+YTGQFVYCG+KA L++GNVMPVG MPEGTI
Sbjct: 81 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTI 112
>sp|P41569|RL8_AEDAL 60S ribosomal protein L8 OS=Aedes albopictus
GN=RpL8 PE=3 SV=1
Length = 261
Score = 62.8 bits (151), Expect = 6e-10
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GMYTGQFVYCG++A LQIGNV+P+G MPEGTI
Sbjct: 81 GMYTGQFVYCGKRAQLQIGNVLPIGLMPEGTI 112
>sp|P08093|RL2_SCHPO 60S ribosomal protein L2 OS=Schizosaccharomyces
pombe (strain ATCC 38366 / 972) GN=rpl2a PE=2 SV=2
Length = 253
Score = 60.5 bits (145), Expect = 3e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GMYTGQFVYCG+ A L +GNV+PVG+MPEGTI
Sbjct: 80 GMYTGQFVYCGKNAALTVGNVLPVGEMPEGTI 111
>sp|Q6PBF0|RL8_XENTR 60S ribosomal protein L8 OS=Xenopus tropicalis
GN=rpl8 PE=2 SV=3
Length = 257
Score = 59.3 bits (142), Expect = 7e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQFVYCG+KA L IGNV+PVG MPEGTI
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTI 112
>sp|P41116|RL8_XENLA 60S ribosomal protein L8 OS=Xenopus laevis
GN=rpl8 PE=2 SV=3
Length = 257
Score = 59.3 bits (142), Expect = 7e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQFVYCG+KA L IGNV+PVG MPEGTI
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTI 112
>sp|P62919|RL8_RAT 60S ribosomal protein L8 OS=Rattus norvegicus
GN=Rpl8 PE=2 SV=2
Length = 257
Score = 59.3 bits (142), Expect = 7e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQFVYCG+KA L IGNV+PVG MPEGTI
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTI 112
>sp|Q5R7Y8|RL8_PONAB 60S ribosomal protein L8 OS=Pongo abelii
GN=RPL8 PE=2 SV=3
Length = 257
Score = 59.3 bits (142), Expect = 7e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQFVYCG+KA L IGNV+PVG MPEGTI
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTI 112
>sp|P62918|RL8_MOUSE 60S ribosomal protein L8 OS=Mus musculus
GN=Rpl8 PE=2 SV=2
Length = 257
Score = 59.3 bits (142), Expect = 7e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQFVYCG+KA L IGNV+PVG MPEGTI
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTI 112
>sp|P62917|RL8_HUMAN 60S ribosomal protein L8 OS=Homo sapiens
GN=RPL8 PE=1 SV=2
Length = 257
Score = 59.3 bits (142), Expect = 7e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQFVYCG+KA L IGNV+PVG MPEGTI
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTI 112
>sp|Q3T0S6|RL8_BOVIN 60S ribosomal protein L8 OS=Bos taurus GN=RPL8
PE=2 SV=3
Length = 257
Score = 59.3 bits (142), Expect = 7e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQFVYCG+KA L IGNV+PVG MPEGTI
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTI 112
>sp|Q6P0V6|RL8_DANRE 60S ribosomal protein L8 OS=Danio rerio GN=rpl8
PE=2 SV=3
Length = 257
Score = 58.9 bits (141), Expect = 9e-09
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQF+YCG+KA L IGNV+PVG MPEGTI
Sbjct: 81 GIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTI 112
>sp|Q4PSL7|RL82_ARATH 60S ribosomal protein L8-2 OS=Arabidopsis
thaliana GN=RPL8B PE=2 SV=3
Length = 260
Score = 57.8 bits (138), Expect = 2e-08
Identities = 21/32 (65%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GMYTGQ++YCG+KANL +GNV+P+G +PEG +
Sbjct: 82 GMYTGQYLYCGKKANLMVGNVLPLGSIPEGAV 113
>sp|Q90YW1|RL8_ICTPU 60S ribosomal protein L8 OS=Ictalurus punctatus
GN=rpl8 PE=2 SV=3
Length = 257
Score = 57.4 bits (137), Expect = 3e-08
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQFV+CG+KA L IGNV+PVG MPEGTI
Sbjct: 81 GIHTGQFVFCGKKAQLNIGNVLPVGVMPEGTI 112
>sp|O15574|RL8_ENTHI 60S ribosomal protein L8 (Fragment)
OS=Entamoeba histolytica GN=RPL8 PE=2 SV=1
Length = 158
Score = 57.0 bits (136), Expect = 4e-08
Identities = 21/32 (65%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G+Y+GQ++YCG KA+L IGNV+P+GQ PEGT+
Sbjct: 72 GLYSGQYIYCGSKASLHIGNVLPIGQCPEGTV 103
>sp|Q9XVF7|RL8_CAEEL 60S ribosomal protein L8 OS=Caenorhabditis
elegans GN=rpl-8 PE=1 SV=1
Length = 260
Score = 55.1 bits (131), Expect = 1e-07
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGT 95
GM+TGQF++CG KA +QIGN++PVG +PEGT
Sbjct: 81 GMHTGQFIHCGAKAQIQIGNIVPVGTLPEGT 111
>sp|P25998|RL8_TOBAC 60S ribosomal protein L8 OS=Nicotiana tabacum
GN=RPL8 PE=2 SV=1
Length = 260
Score = 54.7 bits (130), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GMYTGQFVYCG+KA L +GNV+P+ +PEG +
Sbjct: 81 GMYTGQFVYCGKKATLMVGNVLPLRSIPEGAV 112
>sp|P29766|RL8_SOLLC 60S ribosomal protein L8 OS=Solanum
lycopersicum GN=RPL8 PE=2 SV=1
Length = 260
Score = 54.7 bits (130), Expect = 2e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GMYTGQFVYCG+KA L +GNV+P+ +PEG +
Sbjct: 81 GMYTGQFVYCGKKATLMVGNVLPLRSIPEGAV 112
>sp|P13023|RL8_DICDI 60S ribosomal protein L8 OS=Dictyostelium
discoideum GN=rpl8 PE=1 SV=2
Length = 255
Score = 54.3 bits (129), Expect = 2e-07
Identities = 21/32 (65%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GM+TGQFV+ G+KA L IGN++P+G++PEGTI
Sbjct: 82 GMHTGQFVFAGKKATLTIGNILPIGKLPEGTI 113
>sp|Q6FPN7|RL2_CANGA 60S ribosomal protein L2 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=RPL2 PE=4 SV=1
Length = 254
Score = 53.1 bits (126), Expect = 5e-07
Identities = 20/32 (62%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQF+Y G+KA+L +GNV+P+G +PEGTI
Sbjct: 81 GVHTGQFIYAGKKASLNVGNVLPLGSVPEGTI 112
>sp|P0CX46|RL2B_YEAST 60S ribosomal protein L2-B OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPL2B PE=1
SV=1
Length = 254
Score = 53.1 bits (126), Expect = 5e-07
Identities = 20/32 (62%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQF+Y G+KA+L +GNV+P+G +PEGTI
Sbjct: 81 GVHTGQFIYAGKKASLNVGNVLPLGSVPEGTI 112
>sp|P0CX45|RL2A_YEAST 60S ribosomal protein L2-A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPL2A PE=1
SV=1
Length = 254
Score = 53.1 bits (126), Expect = 5e-07
Identities = 20/32 (62%), Positives = 29/32 (90%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQF+Y G+KA+L +GNV+P+G +PEGTI
Sbjct: 81 GVHTGQFIYAGKKASLNVGNVLPLGSVPEGTI 112
>sp|Q42064|RL83_ARATH 60S ribosomal protein L8-3 OS=Arabidopsis
thaliana GN=RPL8C PE=1 SV=2
Length = 258
Score = 52.8 bits (125), Expect = 7e-07
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GMYTGQF+YCG+KA L +GNV+P+ +PEG +
Sbjct: 81 GMYTGQFLYCGKKATLVVGNVLPLRSIPEGAV 112
>sp|P46286|RL81_ARATH 60S ribosomal protein L8-1 OS=Arabidopsis
thaliana GN=RPL8A PE=1 SV=2
Length = 258
Score = 52.8 bits (125), Expect = 7e-07
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
GMYTGQF+YCG+KA L +GNV+P+ +PEG +
Sbjct: 81 GMYTGQFLYCGKKATLVVGNVLPLRSIPEGAV 112
>sp|Q75AP7|RL2_ASHGO 60S ribosomal protein L2 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=RPL2 PE=4 SV=1
Length = 254
Score = 50.8 bits (120), Expect = 3e-06
Identities = 18/32 (56%), Positives = 28/32 (87%)
Frame = +3
Query: 3 GMYTGQFVYCGRKANLQIGNVMPVGQMPEGTI 98
G++TGQF+Y G+ A+L +GN++P+G +PEGTI
Sbjct: 81 GVHTGQFIYAGKNASLNVGNILPLGSVPEGTI 112
