miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|B3DM47|PBX2_XENTR Pre-B-cell leukemia transcription factor 2
OS=Xenopus tropicalis GN=pbx2 PE=2 SV=1
Length = 422
Score = 63.2 bits (152), Expect = 5e-10
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATEVLNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 247 QATEVLNEYFYSHLSNPYPSEEAKEELAKK 276
>sp|Q6IR52|PBX2_XENLA Pre-B-cell leukemia transcription factor 2
OS=Xenopus laevis GN=pbx2 PE=2 SV=1
Length = 445
Score = 63.2 bits (152), Expect = 5e-10
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATEVLNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 247 QATEVLNEYFYSHLSNPYPSEEAKEELAKK 276
>sp|O35984|PBX2_MOUSE Pre-B-cell leukemia transcription factor 2
OS=Mus musculus GN=Pbx2 PE=1 SV=1
Length = 430
Score = 63.2 bits (152), Expect = 5e-10
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATEVLNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 254 QATEVLNEYFYSHLSNPYPSEEAKEELAKK 283
>sp|P40425|PBX2_HUMAN Pre-B-cell leukemia transcription factor 2
OS=Homo sapiens GN=PBX2 PE=1 SV=2
Length = 430
Score = 63.2 bits (152), Expect = 5e-10
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATEVLNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 254 QATEVLNEYFYSHLSNPYPSEEAKEELAKK 283
>sp|O35317|PBX3_MOUSE Pre-B-cell leukemia transcription factor 3
OS=Mus musculus GN=Pbx3 PE=2 SV=1
Length = 434
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATE+LNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 245 QATEILNEYFYSHLSNPYPSEEAKEELAKK 274
>sp|P40426|PBX3_HUMAN Pre-B-cell leukemia transcription factor 3
OS=Homo sapiens GN=PBX3 PE=1 SV=1
Length = 434
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATE+LNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 245 QATEILNEYFYSHLSNPYPSEEAKEELAKK 274
>sp|B4F6V6|PBX1_XENTR Pre-B-cell leukemia transcription factor 1
OS=Xenopus tropicalis GN=pbx1 PE=2 SV=1
Length = 347
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATE+LNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 243 QATEILNEYFYSHLSNPYPSEEAKEELAKK 272
>sp|Q8QGC4|PBX1_XENLA Pre-B-cell leukemia transcription factor 1
OS=Xenopus laevis GN=pbx1 PE=1 SV=1
Length = 347
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATE+LNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 243 QATEILNEYFYSHLSNPYPSEEAKEELAKK 272
>sp|P41778|PBX1_MOUSE Pre-B-cell leukemia transcription factor 1
OS=Mus musculus GN=Pbx1 PE=1 SV=2
Length = 430
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATE+LNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 243 QATEILNEYFYSHLSNPYPSEEAKEELAKK 272
>sp|P40424|PBX1_HUMAN Pre-B-cell leukemia transcription factor 1
OS=Homo sapiens GN=PBX1 PE=1 SV=1
Length = 430
Score = 62.8 bits (151), Expect = 7e-10
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATE+LNEYFYSHLSNPYPSEEAKEELAK+
Sbjct: 243 QATEILNEYFYSHLSNPYPSEEAKEELAKK 272
>sp|Q9BYU1|PBX4_HUMAN Pre-B-cell leukemia transcription factor 4
OS=Homo sapiens GN=PBX4 PE=2 SV=2
Length = 374
Score = 60.8 bits (146), Expect = 2e-09
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATEVLNEYFYSHL+NPYPSEEAKEELA++
Sbjct: 220 QATEVLNEYFYSHLNNPYPSEEAKEELARK 249
>sp|P41779|HM20_CAEEL Homeobox protein ceh-20 OS=Caenorhabditis
elegans GN=ceh-20 PE=2 SV=1
Length = 338
Score = 60.8 bits (146), Expect = 2e-09
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QATEVLNEYFY HLSNPYPSEEAKE+LA+Q
Sbjct: 198 QATEVLNEYFYGHLSNPYPSEEAKEDLARQ 227
>sp|Q29CT2|EXD_DROPS Homeobox protein extradenticle OS=Drosophila
pseudoobscura pseudoobscura GN=exd PE=3 SV=1
Length = 376
Score = 60.1 bits (144), Expect = 4e-09
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QA+E+LNEYFYSHLSNPYPSEEAKEELA++
Sbjct: 248 QASEILNEYFYSHLSNPYPSEEAKEELARK 277
>sp|P40427|EXD_DROME Homeobox protein extradenticle OS=Drosophila
melanogaster GN=exd PE=1 SV=1
Length = 376
Score = 60.1 bits (144), Expect = 4e-09
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QA+E+LNEYFYSHLSNPYPSEEAKEELA++
Sbjct: 248 QASEILNEYFYSHLSNPYPSEEAKEELARK 277
>sp|Q7PMT1|EXD_ANOGA Homeobox protein extradenticle OS=Anopheles
gambiae GN=exd PE=3 SV=2
Length = 362
Score = 60.1 bits (144), Expect = 4e-09
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QA+E+LNEYFYSHLSNPYPSEEAKEELA++
Sbjct: 236 QASEILNEYFYSHLSNPYPSEEAKEELARK 265
>sp|Q99NE9|PBX4_MOUSE Pre-B-cell leukemia transcription factor 4
OS=Mus musculus GN=Pbx4 PE=2 SV=2
Length = 378
Score = 59.3 bits (142), Expect = 7e-09
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +2
Query: 2 QATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
QAT+VLNEYFYSHLSNPYPSEE KEELA++
Sbjct: 225 QATDVLNEYFYSHLSNPYPSEETKEELARK 254
>sp|Q19503|HM40_CAEEL Homeobox protein ceh-40 OS=Caenorhabditis
elegans GN=ceh-40 PE=1 SV=1
Length = 329
Score = 43.1 bits (100), Expect = 5e-04
Identities = 17/29 (58%), Positives = 25/29 (86%)
Frame = +2
Query: 5 ATEVLNEYFYSHLSNPYPSEEAKEELAKQ 91
+TE+LNEYF +++++PYPSEE K+ LA Q
Sbjct: 198 STEILNEYFLANINHPYPSEEVKQALAMQ 226
