miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O57672|G3P_MELGA Glyceraldehyde-3-phosphate dehydrogenase
(Fragment) OS=Meleagris gallopavo GN=GAPDH PE=2 SV=1
Length = 234
Score = 53.5 bits (127), Expect = 4e-07
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFNGD+HSSTFDA
Sbjct: 180 KGILGYTEDQVVSCDFNGDSHSSTFDA 206
>sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenase
OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2
Length = 333
Score = 53.5 bits (127), Expect = 4e-07
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFNGD+HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNGDSHSSTFDA 295
>sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenase
OS=Gallus gallus GN=GAPDH PE=2 SV=3
Length = 333
Score = 53.5 bits (127), Expect = 4e-07
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFNGD+HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNGDSHSSTFDA 295
>sp|P17244|G3P_CRIGR Glyceraldehyde-3-phosphate dehydrogenase
OS=Cricetulus griseus GN=GAPDH PE=2 SV=2
Length = 333
Score = 51.2 bits (121), Expect = 2e-06
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN D+HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSDSHSSTFDA 295
>sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenase
OS=Columba livia GN=GAPDH PE=2 SV=3
Length = 333
Score = 51.2 bits (121), Expect = 2e-06
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K + YTEDQVVSCDFNGD+HSSTFDA
Sbjct: 269 KGILAYTEDQVVSCDFNGDSHSSTFDA 295
>sp|Q4KYY3|G3P_SPECI Glyceraldehyde-3-phosphate dehydrogenase
OS=Spermophilus citellus GN=GAPDH PE=2 SV=3
Length = 333
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN D HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSDTHSSTFDA 295
>sp|Q28554|G3P_SHEEP Glyceraldehyde-3-phosphate dehydrogenase
(Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4
Length = 322
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN D HSSTFDA
Sbjct: 258 KGILGYTEDQVVSCDFNSDTHSSTFDA 284
>sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase OS=Sus
scrofa GN=GAPDH PE=1 SV=4
Length = 333
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN D HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSDTHSSTFDA 295
>sp|A3FKF7|G3P_MUSPF Glyceraldehyde-3-phosphate dehydrogenase
OS=Mustela putorius furo GN=GAPDH PE=2 SV=1
Length = 333
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN D HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSDTHSSTFDA 295
>sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenase
OS=Felis catus GN=GAPDH PE=2 SV=3
Length = 333
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN D HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSDTHSSTFDA 295
>sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenase
OS=Canis familiaris GN=GAPDH PE=2 SV=3
Length = 333
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN D HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSDTHSSTFDA 295
>sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenase OS=Bos
taurus GN=GAPDH PE=1 SV=4
Length = 333
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN D HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSDTHSSTFDA 295
>sp|P04797|G3P_RAT Glyceraldehyde-3-phosphate dehydrogenase
OS=Rattus norvegicus GN=Gapdh PE=1 SV=3
Length = 333
Score = 49.3 bits (116), Expect = 8e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN ++HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSNSHSSTFDA 295
>sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenase OS=Mus
musculus GN=Gapdh PE=1 SV=2
Length = 333
Score = 49.3 bits (116), Expect = 8e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN ++HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSNSHSSTFDA 295
>sp|P51640|G3P_MESAU Glyceraldehyde-3-phosphate dehydrogenase
(Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1
Length = 312
Score = 48.9 bits (115), Expect = 1e-05
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDF D+HSSTFDA
Sbjct: 259 KGILGYTEDQVVSCDFKSDSHSSTFDA 285
>sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase
OS=Oryctolagus cuniculus GN=GAPDH PE=1 SV=3
Length = 333
Score = 47.8 bits (112), Expect = 2e-05
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVSCDFN HSSTFDA
Sbjct: 269 KGILGYTEDQVVSCDFNSATHSSTFDA 295
>sp|P80534|G3P1_JACOR Glyceraldehyde-3-phosphate dehydrogenase,
muscle OS=Jaculus orientalis PE=1 SV=2
Length = 363
Score = 47.8 bits (112), Expect = 2e-05
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTE QVVS DFNGD+HSSTFDA
Sbjct: 299 KGMLGYTEHQVVSSDFNGDSHSSTFDA 325
>sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenase
OS=Xenopus laevis GN=gapdh PE=2 SV=2
Length = 333
Score = 45.8 bits (107), Expect = 8e-05
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYT+DQVVS DFNGD HSS FDA
Sbjct: 269 KGILGYTQDQVVSTDFNGDTHSSIFDA 295
>sp|P56649|G3P_PANVR Glyceraldehyde-3-phosphate dehydrogenase
OS=Panulirus versicolor PE=1 SV=1
Length = 333
Score = 45.8 bits (107), Expect = 8e-05
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +2
Query: 35 IGYTEDQVVSCDFNGDNHSSTFDAR 109
+GYTED VVSCDF GDN SS FDA+
Sbjct: 270 LGYTEDDVVSCDFTGDNRSSIFDAK 294
>sp|Q9ESV6|G3PT_RAT Glyceraldehyde-3-phosphate dehydrogenase,
testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1
Length = 432
Score = 45.1 bits (105), Expect = 1e-04
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 35 IGYTEDQVVSCDFNGDNHSSTFDAR 109
+ YTEDQVVS DFNGD+HSS FDA+
Sbjct: 370 LAYTEDQVVSTDFNGDSHSSIFDAK 394
>sp|Q96US8|G3P_SCLSC Glyceraldehyde-3-phosphate dehydrogenase
OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1
Length = 338
Score = 44.7 bits (104), Expect = 2e-04
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +2
Query: 11 ANFVQKSWIGYTEDQVVSCDFNGDNHSSTFDAR 109
AN K + YTED VVS D NGDNHSS FDA+
Sbjct: 266 ANGPLKGILAYTEDDVVSTDMNGDNHSSIFDAK 298
>sp|Q94469|G3P_DICDI Glyceraldehyde-3-phosphate dehydrogenase
OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2
Length = 335
Score = 44.7 bits (104), Expect = 2e-04
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +IGYTED+VVS DF GD HSS FDA
Sbjct: 271 KRYIGYTEDEVVSTDFIGDTHSSIFDA 297
>sp|Q5R2J2|G3P_PELSI Glyceraldehyde-3-phosphate dehydrogenase
OS=Pelodiscus sinensis GN=GAPDH PE=2 SV=1
Length = 333
Score = 44.3 bits (103), Expect = 2e-04
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTEDQVVS DFNGD+ SS FDA
Sbjct: 269 KGILGYTEDQVVSSDFNGDSRSSIFDA 295
>sp|P04406|G3P_HUMAN Glyceraldehyde-3-phosphate dehydrogenase
OS=Homo sapiens GN=GAPDH PE=1 SV=3
Length = 335
Score = 44.3 bits (103), Expect = 2e-04
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTE QVVS DFN D HSSTFDA
Sbjct: 271 KGILGYTEHQVVSSDFNSDTHSSTFDA 297
>sp|Q9UR38|G3P_LENED Glyceraldehyde-3-phosphate dehydrogenase
OS=Lentinula edodes GN=gpd PE=2 SV=1
Length = 337
Score = 43.9 bits (102), Expect = 3e-04
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTED VVS DF GDNHSS FDA
Sbjct: 270 KGILGYTEDHVVSTDFIGDNHSSIFDA 296
>sp|O43026|G3P2_SCHPO Glyceraldehyde-3-phosphate dehydrogenase 2
OS=Schizosaccharomyces pombe (strain ATCC 38366 / 972)
GN=gpd3 PE=1 SV=1
Length = 335
Score = 43.9 bits (102), Expect = 3e-04
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTED VVS DF GDNHSS FDA
Sbjct: 271 KGVLGYTEDSVVSTDFCGDNHSSIFDA 297
>sp|Q8NK47|G3P_RHIMI Glyceraldehyde-3-phosphate dehydrogenase
OS=Rhizomucor miehei GN=GPD PE=3 SV=1
Length = 336
Score = 43.5 bits (101), Expect = 4e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDAR 109
K +GYTED+VVS DF GD+HSS FDA+
Sbjct: 269 KGILGYTEDEVVSTDFIGDSHSSIFDAK 296
>sp|Q12552|G3P_ASPNG Glyceraldehyde-3-phosphate dehydrogenase
OS=Aspergillus niger GN=gpdA PE=3 SV=2
Length = 336
Score = 43.5 bits (101), Expect = 4e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDAR 109
K +GYTED +VS D NGD+HSS FDA+
Sbjct: 270 KGILGYTEDDIVSSDLNGDDHSSIFDAK 297
>sp|Q96UF1|G3P3_RHIRA Glyceraldehyde-3-phosphate dehydrogenase 3
OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1
Length = 339
Score = 43.5 bits (101), Expect = 4e-04
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDAR 109
K +GYTEDQVVS DF GD HSS FDA+
Sbjct: 272 KGILGYTEDQVVSTDFVGDAHSSIFDAK 299
>sp|P78958|G3P1_SCHPO Glyceraldehyde-3-phosphate dehydrogenase 1
OS=Schizosaccharomyces pombe (strain ATCC 38366 / 972)
GN=tdh1 PE=1 SV=1
Length = 336
Score = 43.5 bits (101), Expect = 4e-04
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDA 106
K +GYTED VVS DF GDNHSS FDA
Sbjct: 271 KGVLGYTEDAVVSTDFCGDNHSSIFDA 297
>sp|P34783|G3P_ATRNU Glyceraldehyde-3-phosphate dehydrogenase
OS=Atriplex nummularia PE=2 SV=1
Length = 360
Score = 43.1 bits (100), Expect = 5e-04
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDARCWHC 121
K +GYTED VVS DF GDN SS FDA+ C
Sbjct: 273 KGILGYTEDDVVSTDFVGDNRSSIFDAKAGIC 304
>sp|P53430|G3P_MONPU Glyceraldehyde-3-phosphate dehydrogenase
OS=Monascus purpureus GN=GPD1 PE=3 SV=3
Length = 337
Score = 42.7 bits (99), Expect = 7e-04
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +2
Query: 26 KSWIGYTEDQVVSCDFNGDNHSSTFDAR 109
K +GYTED VVS D NGD HSS FDA+
Sbjct: 271 KGVLGYTEDDVVSSDLNGDPHSSIFDAK 298
>sp|Q89AK1|G3P_BUCBP Glyceraldehyde-3-phosphate dehydrogenase
OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=gapA PE=3 SV=1
Length = 333
Score = 42.4 bits (98), Expect = 0.001
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +2
Query: 5 YNANFVQKSWIGYTEDQVVSCDFNGDNHSSTFDAR 109
Y +N K IGYTED VVS DFNG+ +S FDA+
Sbjct: 262 YASNHDMKEVIGYTEDHVVSSDFNGNTLTSIFDAK 296
>sp|P48812|G3P_BRUMA Glyceraldehyde-3-phosphate dehydrogenase
OS=Brugia malayi GN=G3PD PE=2 SV=1
Length = 339
Score = 42.4 bits (98), Expect = 0.001
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2
Query: 11 ANFVQKSWIGYTEDQVVSCDFNGDNHSSTFDA 106
AN K + YTEDQVVS DF GD HSS FD+
Sbjct: 271 ANGPMKGILEYTEDQVVSTDFTGDTHSSIFDS 302
