miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;FJ436986.1/65183-65072 37682:Aegilops tauschii
Length = 112
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 53 tcttacattttgagacagagggagta 78
||||||||||||||||||||||||||
Sbjct: 30 tcttacattttgagacagagggagta 5
>RF00906;MIR1122;AP008209.1/35587272-35587192 39947:Oryza sativa
Japonica Group
Length = 81
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 54 cttacattttgagacagagggagtattaa 82
|||| ||||||||||||||||||||||||
Sbjct: 53 cttatattttgagacagagggagtattaa 81
>RF00906;MIR1122;EU626553.1/80596-80503 4572:Triticum urartu
Length = 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 tcttacattttgagacagagggagta 78
||||||||| ||||||||||||||||
Sbjct: 30 tcttacattatgagacagagggagta 5
>RF00906;MIR1122;AAAA02019740.1/10862-10702 39946:Oryza sativa
Indica Group
Length = 161
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 54 cttacattttgagacagagggagtat 79
|||| |||||||||||||||||||||
Sbjct: 29 cttatattttgagacagagggagtat 4
>RF00906;MIR1122;AP004621.3/94317-94428 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 54 cttacattttgagacagagggagtat 79
||||||||||| ||||||||||||||
Sbjct: 29 cttacattttgggacagagggagtat 4
>RF00906;MIR1122;AC130607.2/121928-122037 39947:Oryza sativa
Japonica Group
Length = 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 54 cttacattttgagacagagggagtat 79
||||||||||||||| ||||||||||
Sbjct: 29 cttacattttgagacggagggagtat 4
