miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 99.6 bits (50), Expect = 1e-20
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 34 cgtcccaaaataagtgatttaaaaatgactcagttttgtactaactttagtacaaaattg 93
||||||||||||||||| | ||||| |||||| |||| ||||||||||||||||| |||
Sbjct: 13 cgtcccaaaataagtgactcaaaaacgactcaactttgcactaactttagtacaaagttg 72
Query: 94 agtcacttattttggaacagagggaatata 123
||||||||||||||| || |||||| ||||
Sbjct: 73 agtcacttattttgggacggagggagtata 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtga 50
||||| |||||||||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtga 75
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtgatttaaaaatgactcagttttgtactaactttag 83
||||| |||| |||||||||||||||| | |||||| ||||| ||||||||||||||||
Sbjct: 4 atactccctctgtcccaaaataagtgactcaaaaatcactcaactttgtactaactttag 63
Query: 84 tacaaaattgagtcactt 101
||| || |||||||||||
Sbjct: 64 tacgaagttgagtcactt 81
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtgatttaaaaatgactcagttttgtactaactttag 83
||||| ||||||||||||||||||||| | |||| ||||||| || ||||||| ||||
Sbjct: 113 atactccctccgtcccaaaataagtgactcaaaagtgactcaacttcgtactaaagttag 54
Query: 84 tacaaaattgagt 96
|||||| ||||||
Sbjct: 53 tacaaagttgagt 41
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 91 ttgagtcacttattttggaacagagggaatatatg 125
|||||||||||||||||| ||||||||| ||||||
Sbjct: 35 ttgagtcacttattttgggacagagggagtatatg 1
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 59 tgactcagttttgtactaactttagtacaaaattgagtcacttattttggaacagaggga 118
||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 67 tgactcaactttatactaactttagtacaaagttgagtcacttattttgggacagaggga 8
Query: 119 atatat 124
|||||
Sbjct: 7 gtatat 2
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 59 tgactcagttttgtactaactttagtacaaaattgagtcacttattttggaacagaggga 118
||||||| |||||||||| |||||| ||| |||||||||||| ||||| || ||||||
Sbjct: 28 tgactcaactttgtactaaagttagtataaagttgagtcacttaatttgggacggaggga 87
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 58 atgactcagttttgtactaactttagtacaaaattgagtcacttattttggaac 111
|||||||| |||||||||||||||||||||| ||| |||| |||||||||||
Sbjct: 68 atgactcaactttgtactaactttagtacaaagttgggtcatctattttggaac 15
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 60.0 bits (30), Expect = 9e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 25 tacttcctccgtcccaaaataagtgatttaaaaatgactcagttttgtactaactttagt 84
|||| ||||||||||||||||||||| | ||||||||||| ||| |||||| |||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaaaaatgactccaatttacactaac-ttagt 53
Query: 85 acaaaattgagtca 98
||||| ||||||||
Sbjct: 52 acaaagttgagtca 39
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 30 cctccgtcccaaaataagtgatttaaaaatgactcagttttgtactaa 77
|||| |||||||||||||||| | |||||||||||| ||||||||||
Sbjct: 10 cctctgtcccaaaataagtgactcaaaaatgactcaactttgtactaa 57
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 91 ttgagtcacttattttggaacagagggaatata 123
|||||||||||||||||| ||||||||| ||||
Sbjct: 35 ttgagtcacttattttgggacagagggattata 3
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 58 atgactcagttttgtactaactttagtacaaaattgagtcacttattttggaa 110
|||||||| |||||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 68 atgactcaactttgtactaactttagtacaaagttgggtcatctattttggaa 16
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 80 ttagtacaaaattgagtcacttattttggaacagag 115
|||||||||| |||||||||||||||||| ||||||
Sbjct: 56 ttagtacaaagttgagtcacttattttgggacagag 91
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 25 tacttcctccgtcccaaaataagtgatttaaaaatgactcagttttgtactaactttagt 84
|||| ||||||||||||||||||||| | |||||||| ||| ||| |||||||||| |
Sbjct: 111 tactccctccgtcccaaaataagtgactgaaaaatgagtcaactttacactaactttact 52
Query: 85 acaaaatt 92
| ||||||
Sbjct: 51 ataaaatt 44
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 81 tagtacaaaattgagtcacttattttggaacagagggaatata 123
||||||||| ||||| ||||||||||||||| |||||| ||||
Sbjct: 45 tagtacaaatttgagacacttattttggaacggagggagtata 3
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 81 tagtacaaaattgagtcacttattttggaacagagggaatata 123
||||||||| ||||| |||||||||||||| ||||||| ||||
Sbjct: 61 tagtacaaagttgagacacttattttggaagagagggagtata 103
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 80 ttagtacaaaattgagtcacttattttggaacagaggga 118
|||||||||| |||||||||||||||||| || ||||||
Sbjct: 46 ttagtacaaagttgagtcacttattttgggacggaggga 8
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 80 ttagtacaaaattgagtcacttattttgg 108
|||||||||| ||||||||||||||||||
Sbjct: 87 ttagtacaaagttgagtcacttattttgg 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtga 50
||||| |||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtga 30
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa
Japonica Group
Length = 241
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||||||||||||||||||||||||
Sbjct: 1 atacttcctccgtcccaaaataagtg 26
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 68 tttgtactaactttagtacaaaattgagtcacttattttggaacagagggaata 121
||||||||| |||||||||||| |||||||| ||||||| |||| || |||||
Sbjct: 58 tttgtactatctttagtacaaagttgagtcatctattttgaaacaaagagaata 5
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||||||||||||||||||||||||
Sbjct: 90 atacttcctccgtcccaaaataagtg 65
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 50.1 bits (25), Expect = 8e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 58 atgactcagttttgtactaactttagtacaaaattgagtcacttattttggaacagaggg 117
|||||||| ||||||||||||||||| ||| ||| |||| ||||||||||| |||||
Sbjct: 27 atgactcaactttgtactaactttagtgtaaagttgggtcatctattttggaacggaggg 86
Query: 118 a 118
|
Sbjct: 87 a 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 80 ttagtacaaaattgagtcacttattttggaacagaggga 118
|||||||||| |||||||| ||||||||||| ||||||
Sbjct: 46 ttagtacaaagttgagtcatctattttggaacggaggga 8
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 68 tttgtactaactttagtacaaaattgagtcacttattttgg 108
|||||||||| |||||||||| ||||| ||||||||||||
Sbjct: 55 tttgtactaaagttagtacaaagttgagacacttattttgg 95
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 68 tttgtactaactttagtacaaa 89
||||||||||||||||||||||
Sbjct: 76 tttgtactaactttagtacaaa 55
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 80 ttagtacaaaattgagtcacttattttggaacagagggaatata 123
|||||||||| ||||||||||||||| || || |||||| ||||
Sbjct: 62 ttagtacaaagttgagtcacttatttcgggacggagggagtata 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 81 tagtacaaaattgagtcacttattttggaacagagggaatatat 124
||||||||| ||||| |||||||||||| || |||||| |||||
Sbjct: 61 tagtacaaagttgagacacttattttgggacggagggagtatat 104
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 102 atactccctccgtcccaaaataagtg 77
>RF01058;MIR806;AAAA02032712.1/19270-19031 39946:Oryza sativa
Indica Group
Length = 240
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 tacttcctccgtcccaaaataag 47
|||||||||||||||||||||||
Sbjct: 2 tacttcctccgtcccaaaataag 24
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 aatacttcctccgtcccaaaataagtg 49
|||||| ||||||||||||||||||||
Sbjct: 102 aatactccctccgtcccaaaataagtg 76
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 23 aatacttcctccgtcccaaaataagtg 49
|||||| ||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/42 (90%), Gaps = 2/42 (4%)
Strand = Plus / Minus
Query: 68 tttgtactaact--ttagtacaaaattgagtcacttattttg 107
|||||||||||| |||||||||| |||| ||||||||||||
Sbjct: 60 tttgtactaactagttagtacaaagttgaatcacttattttg 19
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 80 ttagtacaaaattgagtcacttattttggaacagaggga 118
|||||||||| |||||||| ||||||||||| ||||||
Sbjct: 46 ttagtacaaagttgagtcatctattttggaacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 58 atgactcagttttgtactaactttagtacaaaatt 92
|||||||| |||||||||||| ||||||||||||
Sbjct: 79 atgactcaactttgtactaactatagtacaaaatt 45
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 68 tttgtactaactttagtacaaaattgagtcacttattttggaacagaggga 118
|||||||||| |||||||||| || || |||||||||||| || ||||||
Sbjct: 48 tttgtactaaagttagtacaaagttaagacacttattttgggacggaggga 98
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 68 tttgtactaactttagtacaaa 89
||||||||||||||||||||||
Sbjct: 69 tttgtactaactttagtacaaa 48
>RF00906;MIR1122;AAAA02005583.1/44128-44034 39946:Oryza sativa
Indica Group
Length = 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 aatacttcctccgtcccaaaata 45
|||||||||||||||||||||||
Sbjct: 3 aatacttcctccgtcccaaaata 25
>RF00906;MIR1122;AP008216.1/2906565-2906717 39947:Oryza sativa
Japonica Group
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 aatacttcctccgtcccaaaata 45
|||||||||||||||||||||||
Sbjct: 151 aatacttcctccgtcccaaaata 129
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 244 atactacctccgtcccaaaataagtg 219
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 1 atactacctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 1 atactacctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 245 atactacctccgtcccaaaataagtg 220
>RF00906;MIR1122;DQ445142.1/2720-2618 161934:Beta vulgaris
Length = 103
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 21 ttaatacttcctccgtcccaaaataagtga 50
|||||||||||||||| ||| |||||||||
Sbjct: 103 ttaatacttcctccgttccataataagtga 74
>RF00906;MIR1122;FJ752586.1/56000-56102 161934:Beta vulgaris
Length = 103
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 25 tacttcctccgtcccaaaataagtga 50
|||||||||||| |||||||||||||
Sbjct: 99 tacttcctccgttccaaaataagtga 74
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 81 tagtacaaaattgagtcacttattttggaacagaggga 118
||||||||| ||||| |||||||||||| || ||||||
Sbjct: 45 tagtacaaagttgagacacttattttgggacggaggga 8
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 102 atactccctccgtcccaaaataagtg 77
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 68 tttgtactaactttagtacaaa 89
||||||||||||||||||||||
Sbjct: 117 tttgtactaactttagtacaaa 96
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 25 tacttcctccgtcccaaaataa 46
||||||||||||||||||||||
Sbjct: 101 tacttcctccgtcccaaaataa 80
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 81 tagtacaaaattgagtcacttattttggaacagaggga 118
||||||||| || || || |||||||||||||||||||
Sbjct: 45 tagtacaaagttaagacagttattttggaacagaggga 8
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 103 atactccctccgtcccaaaataagtg 78
>RF00906;MIR1122;EU730899.1/86003-86096 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 30 cctccgtcccaaaataagtgat 51
||||||||||||||||||||||
Sbjct: 85 cctccgtcccaaaataagtgat 64
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 atacttcctccgtcccaaaataagtg 49
||||| ||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
