miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||||||||||||||||||||||||||||||| || |||| |||| |||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
|||||||||||||||||||||| ||||||| |||||
Sbjct: 65 acaaagttgagacacttattttgggacggagggagta 101
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaa 71
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||||||||||||||||||||||||||||||||||||||||||||| |||| || || |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaat 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
|||||||||||||| ||||||| ||||||| |||||
Sbjct: 65 acaaagttgagacatttattttgggacggagggagta 101
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaataagtgtctcaa 41
||||||||||||||||||||||||| ||||||||
Sbjct: 104 tactactccctccgtcccaaaataaatgtctcaa 71
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 123 bits (62), Expect = 5e-28
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 14 tccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagtaca 73
|||||| |||| ||||||||||||| |||||||||||||||||| |||||||||| ||||
Sbjct: 8 tccctcggtcctaaaataagtgtcttaagcttagtacaactttgtactagagctaataca 67
Query: 74 aagttgagacacttattttaagacggagagagta 107
||||||||||| ||||||| |||||||| |||||
Sbjct: 68 aagttgagacagttattttgagacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
||||||||||||| |||||||| ||||||||
Sbjct: 101 tactccctccgtctcaaaataactgtctcaa 71
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 123 bits (62), Expect = 5e-28
Identities = 77/82 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||| |||||||||||||||| |||||||||| ||||||||||||| |||||| |||||
Sbjct: 5 tactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactagt 64
Query: 71 acaaagttgagacacttatttt 92
||||||||||||||||||||||
Sbjct: 65 acaaagttgagacacttatttt 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaataagtgtctcaa 41
||||||||||||| ||||||||||||||||||||
Sbjct: 103 tactactccctcc-tcccaaaataagtgtctcaa 71
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 123 bits (62), Expect = 5e-28
Identities = 77/82 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||||
Sbjct: 101 tactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctagt 42
Query: 71 acaaagttgagacacttatttt 92
||||| ||||||||||||||||
Sbjct: 41 acaaatttgagacacttatttt 20
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtctcaa 35
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 123 bits (62), Expect = 5e-28
Identities = 77/82 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||| || |||||||| |||||||||||||||||||||||| | ||||||||||
Sbjct: 5 tactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagctagt 64
Query: 71 acaaagttgagacacttatttt 92
||||||||||||||||||||||
Sbjct: 65 acaaagttgagacacttatttt 86
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 123 bits (62), Expect = 5e-28
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||||||||||| ||||||||||||||||||| ||||||||||||| |||| || ||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagtac 108
|||||||| ||||||||||||| ||||||| ||||||
Sbjct: 65 acaaagttaagacacttattttgggacggagggagtac 102
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtct 38
||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtct 74
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 77 ttgagacacttattttaagacggagagagtaca 109
|||||||||||||||| |||||||| |||||||
Sbjct: 35 ttgagacacttattttgagacggagggagtaca 3
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||||||||||||||||||||||||||||||||||||||||| ||| |||| || || |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaat 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
|||||||||||||| ||||||| ||||||| |||||
Sbjct: 65 acaaagttgagacatttattttgggacggagggagta 101
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaataagtgtctcaa 41
||||||||||||||||||||||||| ||||||||
Sbjct: 104 tactactccctccgtcccaaaataaatgtctcaa 71
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 119 bits (60), Expect = 8e-27
Identities = 90/100 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||||||||||||||||||||| ||||||||| || |||| ||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagtacaa 110
|||||||||||||||||||||| || |||| ||||||||
Sbjct: 65 acaaagttgagacacttattttgggatggagggagtacaa 104
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||| ||||||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtctcaa 71
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 117 bits (59), Expect = 3e-26
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||||| ||||||||||||||| ||| |||||||| |||| ||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagtaca 109
|||||||||||||| ||||||| ||||||| |||||||
Sbjct: 65 acaaagttgagacagttattttgggacggagggagtaca 103
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttagt 42
Query: 71 acaaagttgagacacttatttt 92
||| ||||||||||||||||
Sbjct: 41 gtaaaattgagacacttatttt 20
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||| ||||||||||||||||||||||||
Sbjct: 5 tactccttccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 113 bits (57), Expect = 5e-25
Identities = 88/97 (90%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
|||||| ||||||||||||||| ||||||| |||||
Sbjct: 65 acaaag-tgagacacttattttgggacggagggagta 100
Score = 60.0 bits (30), Expect = 7e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctca 40
||||||||||||||||||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgtctca 71
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 113 bits (57), Expect = 5e-25
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||||||||||| |||||||||||||| || |||||||||| |||| ||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
|||| ||||||||| ||||||| |||| ||| |||||
Sbjct: 65 acaatgttgagacagttattttgagacagagggagta 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaataagtgtctcaa 41
|||||||||||| ||| |||||||| ||||||||
Sbjct: 104 tactactccctctgtctcaaaataactgtctcaa 71
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 113 bits (57), Expect = 5e-25
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||||||||||||||| | |||||| |||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
|||||||||| ||||||||| |||||||| |||||
Sbjct: 65 gtaaagttgagatacttattttgagacggagggagta 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||| |||||||||| ||||||
Sbjct: 104 tactactccctccgtctcaaaataagtatctcaa 71
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||||||||||||||| |||||||| |||| ||||| |||| |||| |||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 71 acaaagttgagacacttatttt 92
| ||||||||||||||||||||
Sbjct: 41 ataaagttgagacacttatttt 20
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||| ||||||||||||||||||||||||
Sbjct: 5 tactccatccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 107 bits (54), Expect = 3e-23
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||||||||||| |||||||| |||||||| ||| ||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctagt 63
Query: 71 acaaagttgagacacttatttt 92
|||||||||||||| |||||||
Sbjct: 64 acaaagttgagacagttatttt 85
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 69 gtacaaagttgagacacttattttaagacggagagagta 107
|||||||||||||||| ||||||| |||||||| |||||
Sbjct: 43 gtacaaagttgagacagttattttgagacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||| ||||||||||| ||||||||
Sbjct: 100 tactccctccatcccaaaataactgtctcaa 70
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 105 bits (53), Expect = 1e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaagcttagtataactttgcacta-agctagt 42
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
| ||| || ||| ||||||||| |||||||| |||||
Sbjct: 41 ataaaattaagaaacttattttgagacggagggagta 5
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||||||||||||||| | |||||| |||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
|||| ||||| ||||||||| |||||||| |||||
Sbjct: 65 gtaaagctgagatacttattttgagacggagggagta 101
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaataagtgtctca 40
|||||||||||||||| |||||||||| |||||
Sbjct: 104 tactactccctccgtctcaaaataagtatctca 72
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||| | |||||||| ||| ||| |||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccatttcaaaataattgtttcatgcttagtacaactttgtactagagctagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
|||||||||||||| ||||||| | |||||| |||||
Sbjct: 65 acaaagttgagacatttattttgaaacggagggagta 101
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 13 ctccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagtac 72
|||||| |||||||||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaactttgcactaaatttagtac 66
Query: 73 aaagttgagac 83
|||||||||||
Sbjct: 67 aaagttgagac 77
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 36 tctcaagcttagtacaactttgcactagagctagtacaaagttgagacacttattttaag 95
|||||| ||||||||||||||| |||| || ||||||||| |||||||| ||||||| |
Sbjct: 78 tctcaaccttagtacaactttgtactaaagttagtacaaacttgagacagttattttggg 137
Query: 96 acggagagagta 107
|||||| |||||
Sbjct: 138 acggagggagta 149
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaag 42
|||||||||||||||||||||| |||||||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaag 118
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||||||||||||||| ||||| |||||||||| || ||| |||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
| |||||||||||| ||||||| ||||||| |||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 95.6 bits (48), Expect = 1e-19
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctag 69
||||||||||||| ||||||||||||||| ||||||| ||||| |||| |||| | |||
Sbjct: 4 ctactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaa 63
Query: 70 tacaaagttgagacacttattttaagacggag 101
||||||||||||||| ||||||| |||||||
Sbjct: 64 tacaaagttgagacagttattttgggacggag 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||| ||||||||||||||||| ||||||||
Sbjct: 101 tacttcctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 93.7 bits (47), Expect = 5e-19
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||| |||| || ||||||||||||||||| ||||||||||||| | || |||||||
Sbjct: 101 tactcactccatctcaaaataagtgtctcaactctagtacaactttgtattaaagctagt 42
Query: 71 acaaagttgagacacttattttaagacggag 101
|||||||||||||||||||||| |||||||
Sbjct: 41 acaaagttgagacacttattttgggacggag 11
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 13 ctccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 91.7 bits (46), Expect = 2e-18
Identities = 80/92 (86%), Gaps = 7/92 (7%)
Strand = Plus / Plus
Query: 8 tactactccctccgtcccaaaataagtgtctca-------agcttagtacaactttgcac 60
||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 2 tactactccctccgtcccaaaataagtgtcttgtgtcttgagcttagtacaactttgtac 61
Query: 61 tagagctagtacaaagttgagacacttatttt 92
|| || ||||||||||||||||||||||||||
Sbjct: 62 taaagttagtacaaagttgagacacttatttt 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||| ||||||||||||||||||||
Sbjct: 108 tactccctccatcccaaaataagtgtctcaa 78
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 7e-18
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||||||||||||||||||| ||||| |||||||||| || ||| | |||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 71 acaaagttgagacacttattttaagacggagagagta 107
| |||||||||||| ||||||| ||||||| |||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 7e-18
Identities = 81/93 (87%)
Strand = Plus / Plus
Query: 15 ccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagtacaa 74
|||||||||||||||||||||||| ||||||||||||| ||| || ||||||||||||
Sbjct: 9 ccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagctagtacaa 68
Query: 75 agttgagacacttattttaagacggagagagta 107
|||| ||||| |||||| ||||||| |||||
Sbjct: 69 agttaagacagatattttgggacggagggagta 101
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 21 gtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagtacaaagttga 80
|||||||||||| | |||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 91 gtcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttga 32
Query: 81 gacacttattttaagacggagagagta 107
||||| |||||| |||||||| |||||
Sbjct: 31 gacacctattttgagacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 8 tactactccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||| ||||||| |||||||||
Sbjct: 2 tactactccctccgtctcaaaataggtgtctcaa 35
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 26 aaaataagtgtctcaagcttagtacaactttgcactagagctagtacaaagttgagacac 85
||||||||||||| |||||||||| || ||| ||||||||||| |||||||| |||||
Sbjct: 20 aaaataagtgtcttaagcttagtataattttatactagagctagaacaaagttaagacaa 79
Query: 86 ttattttaagacggagagagta 107
||||||| ||||||| |||||
Sbjct: 80 ttattttgggacggagggagta 101
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaataagtgtct 38
||||||||||||||||||||||| |||||
Sbjct: 102 ctactccctccgtcccaaaataattgtct 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 80 agacacttattttaagacggagagagta 107
||||||||||||||| ||||||||||||
Sbjct: 32 agacacttattttaaaacggagagagta 5
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 13 ctccctccgtcccaaaataagtgtctcaagcttagtacaactttgcacta 62
||||||||||||||||||||||||||||| |||||| ||||||| ||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttagtataactttgtacta 56
Score = 60.0 bits (30), Expect = 7e-09
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaa 52
|||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 89 tacttcctccgtcccaaaataagtgtctcaa-cttagtacaa 49
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
|||||| ||||| | |||||||||||||||| ||||||| |||||| |||| ||||| |
Sbjct: 5 tactccttccgttctaaaataagtgtctcaatcttagtataactttatactaaagctaat 64
Query: 71 acaaagttgagacacttatttt 92
||||| || | |||||||||||
Sbjct: 65 acaaaattaacacacttatttt 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgt 36
|||||||||| |||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgt 76
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
||||||||||||| |||||||| ||||| || ||||||| || ||| | || |||||||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 71 acaaagttgagacacttatttt 92
|||||||| ||||| |||||||
Sbjct: 41 acaaagttaagacagttatttt 20
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccaaaataagtgtctc 39
|||||||||||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccaaaataagtgtctc 33
Score = 44.1 bits (22), Expect = 4e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 67 tagtacaaagttg-agacacttattttaagacggagagagta 107
||||||||||||| ||||||||||||| ||||||| |||||
Sbjct: 46 tagtacaaagttggagacacttattttgggacggagggagta 5
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 8 tactactccctccgtcccaaaataagtgtctcaagcttagtac 50
|||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 2 tactactccctccgtcccaaaataagtgtcgcaaatttagtac 44
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagtgtc 76
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaataagtgt 36
|||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtgt 27
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 7 atactactccctccgtcccaaaataagtgtc 37
||||||||||| |||||||||||||||||||
Sbjct: 105 atactactcccgccgtcccaaaataagtgtc 75
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 tccctccgtcccaaaataagtgtc 37
||||||||||||||||||||||||
Sbjct: 8 tccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
||||||||||||||||||||||||| |||||
Sbjct: 112 tactccctccgtcccaaaataagtgactcaa 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
||||||||| ||||||||||||||| |||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaa 35
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
||||||||||||||||||||||||| |||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaa 81
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
||||||||||||||||||||||||| |||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaa 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 50 caactttgcactagagctagtacaaagttgagacacttattttaagacggagagagta 107
||||||||||||| ||||||||||||||| |||||||||| ||||||| |||||
Sbjct: 43 caactttgcactaactttagtacaaagttgagtcacttattttgggacggagggagta 100
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
||||||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaa 35
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 67 tagtacaaagttgagacacttattttaagacggagagagta 107
||||||||||||||| |||||||||| ||||||| |||||
Sbjct: 45 tagtacaaagttgagtcacttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 67 tagtacaaagttgagacacttattttaagacggagagagtacaa 110
||||||||||||||| |||||||||| || |||| ||||||||
Sbjct: 88 tagtacaaagttgagtcacttattttgggatggagcgagtacaa 131
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||
Sbjct: 246 ctactccctccgtcccaaaataagtg 221
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||
Sbjct: 241 ctactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctca 40
|||||||||||| |||||||||||||||||
Sbjct: 130 tactccctccgttccaaaataagtgtctca 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 8 tactactccctccgtcccaaaataagtgtct 38
||||| ||||||||||||||||| |||||||
Sbjct: 2 tactaatccctccgtcccaaaatgagtgtct 32
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 244 tactccctccgtcccaaaataagtg 220
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaataagtg 35
||||| ||||||||||||||||||||
Sbjct: 244 ctactacctccgtcccaaaataagtg 219
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 50.1 bits (25), Expect = 6e-06
Identities = 84/100 (84%), Gaps = 4/100 (4%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtac-aactttgcactagagctag 69
||||||||||||||| ||||||||| ||||| ||| |||| || |||| |||| | |||
Sbjct: 103 tactccctccgtcccgaaataagtgactcaa-ctttgtactaattttgtactaaaaatag 45
Query: 70 tacaaagttgaga--cacttattttaagacggagagagta 107
|| |||||||||| |||||||||| ||||||| |||||
Sbjct: 44 tataaagttgagatccacttattttgggacggagggagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtg 87
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaataagtgtct 38
||||||||||| |||||||||||||||||
Sbjct: 102 ctactccctccatcccaaaataagtgtct 74
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaataagt 34
|||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 atactactccctccgtcccaaaata 31
|||||||||||||||||||||||||
Sbjct: 112 atactactccctccgtcccaaaata 88
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaataag 33
||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataag 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 236 tactccctccgtcccaaaataa 215
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 67 tagtacaaagttgagacacttattttaagacggagagagtacaa 110
||||||||||||||| |||||||||| ||| ||| ||||||||
Sbjct: 57 tagtacaaagttgagtcacttattttgggacagagcgagtacaa 100
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaataagtgtc 37
||||| ||||||||||||||||||||||
Sbjct: 107 ctactacctccgtcccaaaataagtgtc 80
>RF00906;MIR1122;EU730897.1/72285-72181 15368:Brachypodium
distachyon
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaact 54
||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 101 tactccctccgatccataataagtgtctcagacttagtacaact 58
>RF00906;MIR1122;AAAA02003301.1/35949-35819 39946:Oryza sativa
Indica Group
Length = 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 130 tactactccctccgtcccaaaata 107
>RF00906;MIR1122;AP002744.2/5581-5711 39947:Oryza sativa Japonica
Group
Length = 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 130 tactactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa
Indica Group
Length = 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 tactactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 2 tactactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02009296.1/3612-3735 39946:Oryza sativa Indica
Group
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 123 tactactccctccgtcccaaaata 100
>RF00906;MIR1122;AC138197.3/31250-31161 39947:Oryza sativa
Japonica Group
Length = 90
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 89 tactactccctccgtcccaaaata 66
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 tactactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 2 tactactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02005722.1/24068-24224 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 156 tactactccctccgtcccaaaata 133
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaataagtg 35
||||| ||||||||||||||||||||
Sbjct: 240 ctactacctccgtcccaaaataagtg 215
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 239 tactccctccgtcccaaaataag 217
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaataagtg 35
||||| ||||||||||||||||||||
Sbjct: 1 ctactacctccgtcccaaaataagtg 26
>RF00906;MIR1122;AF325196.1/34233-34141 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 91 actactccctccgtcccaaaata 69
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
||||||| |||||||||||||||||||
Sbjct: 82 tactcccaccgtcccaaaataagtgtc 56
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||||| |||||| |||||
Sbjct: 5 tactccctccgtcccaaattaagtgactcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||||| |||||| |||||
Sbjct: 113 tactccctccgtcccaaattaagtgactcaa 83
>RF00906;MIR1122;CR626933.1/11895-11804 4571:Triticum turgidum
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 cctccgtcccaaaataagtgtct 38
|||||||||||||||||||||||
Sbjct: 85 cctccgtcccaaaataagtgtct 63
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||| ||||||||||||
Sbjct: 102 tactccctccgtcctaaaataagtgtc 76
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
||||||||| |||||||||||||||||
Sbjct: 102 tactccctctgtcccaaaataagtgtc 76
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
||||||||| |||||||||||||||||
Sbjct: 102 tactccctcggtcccaaaataagtgtc 76
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 81 gacacttattttaagacggagagagta 107
||||||||||||||||||||| |||||
Sbjct: 31 gacacttattttaagacggagggagta 5
>RF00906;MIR1122;AF427791.1/40179-40064 4513:Hordeum vulgare
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 77 ttgagacacttattttaagacggagagagta 107
||||| |||||||||| ||||||||||||||
Sbjct: 35 ttgagtcacttattttgagacggagagagta 5
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
||||||||| ||||||||||||||| |||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
|||||||||||||||||| |||||| |||||
Sbjct: 90 tactccctccgtcccaaattaagtgactcaa 60
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 67 tagtacaaagttgagacacttatttt 92
||||||||||||||| ||||||||||
Sbjct: 45 tagtacaaagttgagtcacttatttt 20
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 157 ctactccctccgtcccaaaataa 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02016488.1/7317-7428 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 110 actactccctccgtcccaaaata 88
>RF00906;MIR1122;AC104429.2/50540-50620 39947:Oryza sativa
Japonica Group
Length = 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 7 atactactccctccgtcccaaaa 29
|||||||||||||||||||||||
Sbjct: 81 atactactccctccgtcccaaaa 59
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa
Indica Group
Length = 149
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02013497.1/8427-8281 39946:Oryza sativa
Indica Group
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02007985.1/61647-61567 39946:Oryza sativa
Indica Group
Length = 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 atactactccctccgtcccaaaa 29
|||||||||||||||||||||||
Sbjct: 1 atactactccctccgtcccaaaa 23
>RF00906;MIR1122;AP003046.2/109392-109265 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 7 atactactccctccgtcccaaaa 29
|||||||||||||||||||||||
Sbjct: 128 atactactccctccgtcccaaaa 106
>RF00906;MIR1122;AACV01010712.1/16660-16524 39947:Oryza sativa
Japonica Group
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccaaaataagtg 35
||||||||||||||||||| |||||||
Sbjct: 3 actactccctccgtcccaatataagtg 29
>RF00906;MIR1122;AC130724.2/11285-11174 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccaaaata 25
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataag 27
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataag 71
>RF00906;MIR1122;AP005510.3/22168-22263 39947:Oryza sativa
Japonica Group
Length = 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tactactccctccgtcccaaaat 30
|||||||||||||||||||||||
Sbjct: 2 tactactccctccgtcccaaaat 24
>RF00906;MIR1122;AL662977.3/22853-22707 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 145 actactccctccgtcccaaaata 123
>RF00906;MIR1122;AACV01012472.1/10900-10769 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 130 actactccctccgtcccaaaata 108
>RF00906;MIR1122;AK242602.1/3859-3737 39947:Oryza sativa Japonica
Group
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 121 actactccctccgtcccaaaata 99
>RF00906;MIR1122;AL606656.3/84170-84034 39947:Oryza sativa Japonica
Group
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaataagtg 35
||||||||||||||||||| |||||||
Sbjct: 135 actactccctccgtcccaatataagtg 109
>RF00906;MIR1122;AACV01023162.1/1695-1577 39947:Oryza sativa
Japonica Group
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 117 actactccctccgtcccaaaata 95
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa Japonica
Group
Length = 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 105 actactccctccgtcccaaaata 83
>RF01058;MIR806;AAAA02020164.1/6230-6473 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 244 ctactccctccgtcccaaaata 223
>RF01058;MIR806;AP003491.3/18972-19202 39947:Oryza sativa Japonica
Group
Length = 231
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaata 22
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 242 ctactccctccgtcccaaaata 221
>RF00906;MIR1122;AC161407.5/87285-87421 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaat 30
||||||||||||||||||||||
Sbjct: 135 actactccctccgtcccaaaat 114
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccaaaat 30
||||||||||||||||||||||
Sbjct: 103 actactccctccgtcccaaaat 82
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccaaaat 30
||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccaaaat 24
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 81/98 (82%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtac-aactttgcactagagctag 69
|||||||||||| |||||||| || ||||| ||| |||| || |||| |||| || |||
Sbjct: 5 tactccctccgttccaaaatagatgactcaa-ctttgtactaattttgtactatagttag 63
Query: 70 tacaaagttgagacacttattttaagacggagagagta 107
|||||||||||| || ||||||| |||||| |||||
Sbjct: 64 tacaaagttgagtcatctattttagaacggagggagta 101
>RF00906;MIR1122;AP008208.1/309335-309214 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 tactactccctccgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 2 tactactccctccgtcccaaaa 23
>RF00906;MIR1122;AAAA02021752.1/2915-2764 39946:Oryza sativa Indica
Group
Length = 152
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 149 ctactccctccgtcccaaaata 128
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AAAA02032192.1/8285-8403 39946:Oryza sativa Indica
Group
Length = 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 116 ctactccctccgtcccaaaata 95
>RF00906;MIR1122;AAAA02027402.1/5650-5805 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008209.1/35984076-35984203 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 125 ctactccctccgtcccaaaata 104
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AL606686.3/85873-85713 39947:Oryza sativa Japonica
Group
Length = 161
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 158 ctactccctccgtcccaaaata 137
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AAAA02012587.1/870-973 39946:Oryza sativa Indica
Group
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccaaaat 30
||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccaaaat 24
>RF00906;MIR1122;AAAA02034474.1/8259-8349 39946:Oryza sativa
Indica Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 88 ctactccctccgtcccaaaata 67
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 118 tactccctccgtcccaaaataa 97
>RF00906;MIR1122;AAAA02032340.1/20991-20868 39946:Oryza sativa
Indica Group
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 121 ctactccctccgtcccaaaata 100
>RF00906;MIR1122;AP006171.2/9738-9583 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 155 tactactccctccgtcccaaaa 134
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 132 ctactccctccgtcccaaaata 111
>RF00906;MIR1122;AP008209.1/8919908-8919797 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 153 ctactccctccgtcccaaaata 132
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaataagtg 35
||||||||||||| ||||||||||||
Sbjct: 86 ctactccctccgttccaaaataagtg 61
>RF00906;MIR1122;AP006453.3/76317-76162 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008208.1/9514407-9514515 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP004851.3/37998-38119 39947:Oryza sativa Japonica
Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 tactactccctccgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 121 tactactccctccgtcccaaaa 100
>RF00906;MIR1122;AP008216.1/11618978-11618822 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AP003410.4/123214-123103 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AP008207.1/42089526-42089634 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008213.1/3607812-3607697 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 113 ctactccctccgtcccaaaata 92
>RF00906;MIR1122;AL845342.2/23218-23105 4530:Oryza sativa (rice)
Length = 114
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 111 ctactccctccgtcccaaaata 90
>RF00906;MIR1122;AP008216.1/22670503-22670626 39947:Oryza sativa
Japonica Group
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 121 ctactccctccgtcccaaaata 100
>RF00906;MIR1122;AP008217.1/18229594-18229693 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 97 ctactccctccgtcccaaaata 76
>RF00906;MIR1122;AC145396.3/122873-122984 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AL663014.3/90673-90776 39947:Oryza sativa
Japonica Group
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccaaaat 30
||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccaaaat 24
>RF00906;MIR1122;AAAA02005682.1/11197-11089 39946:Oryza sativa
Indica Group
Length = 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 106 ctactccctccgtcccaaaata 85
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92
>RF00906;MIR1122;AAAA02014858.1/50124-50003 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaataagtg 35
|||||||||||||||||| |||||||
Sbjct: 4 ctactccctccgtcccaatataagtg 29
>RF00906;MIR1122;AL662959.3/95147-95258 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02000569.1/43583-43659 39946:Oryza sativa
Indica Group
Length = 77
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;CT827956.1/52813-52688 4530:Oryza sativa (rice)
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 123 ctactccctccgtcccaaaata 102
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 153 ctactccctccgtcccaaaata 132
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 152 ctactccctccgtcccaaaata 131
>RF00906;MIR1122;AACV01025228.1/13353-13452 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01024802.1/12019-12139 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 118 ctactccctccgtcccaaaata 97
>RF00906;MIR1122;AC078829.10/4988-5143 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 153 ctactccctccgtcccaaaata 132
>RF00906;MIR1122;AAAA02015438.1/12525-12421 39946:Oryza sativa
Indica Group
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AAAA02034107.1/9075-8937 39946:Oryza sativa Indica
Group
Length = 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 136 ctactccctccgtcccaaaata 115
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataa 72
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 125 tactccctccgtcccaaaataa 104
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 153 ctactccctccgtcccaaaata 132
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AACV01017125.1/17840-17954 39947:Oryza sativa
Japonica Group
Length = 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 atactactccctccgtcccaaaataa 32
|||||||||| |||||||||||||||
Sbjct: 1 atactactccttccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26