miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 147 bits (74), Expect = 4e-35
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagcta 69
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||
Sbjct: 3 tatactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagtta 62
Query: 70 atacaaagttggacacttattttgggacggagggagta 107
|||||||| |||||||||||||||||||||||||||
Sbjct: 63 gtacaaagtgagacacttattttgggacggagggagta 100
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtctca 41
|||||||||||||||||||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtgtctca 71
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 133 bits (67), Expect = 6e-31
Identities = 92/99 (92%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagcta 69
|||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| || ||
Sbjct: 3 tatactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagtta 62
Query: 70 atacaaagttg-gacacttattttgggacggagggagta 107
||||||||||| |||| ||||||||||||||||||||||
Sbjct: 63 atacaaagttgagacatttattttgggacggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaa 71
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 90/97 (92%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
|||||||||||||||||||||||||||||||||||| | |||||| ||||| ||||| |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 72 acaaagttg-gacacttattttgggacggagggagta 107
||||||||| |||||||||||||||||||||||||||
Sbjct: 65 acaaagttgagacacttattttgggacggagggagta 101
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaataagtgtctcaa 42
||||||||||||||||||||||||||||||||||
Sbjct: 104 atatactccctccgtcccaaaataagtgtctcaa 71
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagtaa 108
||||||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagtaa 4
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 125 bits (63), Expect = 1e-28
Identities = 91/99 (91%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagcta 69
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| || ||
Sbjct: 3 tatactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagtta 62
Query: 70 atacaaagttg-gacacttattttgggacggagggagta 107
||||||||||| |||| ||||||||||||||||||||||
Sbjct: 63 atacaaagttgagacatttattttgggacggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaa 71
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 89/97 (91%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
|||||||||||| ||||||||||||||| ||||||||||||||||| ||||| | |||||
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 72 acaaagttg-gacacttattttgggacggagggagta 107
||||||||| |||| ||||||||||||||||| ||||
Sbjct: 65 acaaagttgagacagttattttgggacggaggaagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||| ||||||||||||
Sbjct: 31 gacacttattttggaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||| ||||||||||||||||| ||||||||
Sbjct: 101 tacttcctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 117 bits (59), Expect = 3e-26
Identities = 90/99 (90%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagcta 69
|||||||||||||| ||||||||||||||| ||| || ||||||||| |||||||||||
Sbjct: 3 tatactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagcta 62
Query: 70 atacaaagttg-gacacttattttgggacggagggagta 107
|||||||||| |||| ||||||||||||||||||||||
Sbjct: 63 gtacaaagttgagacagttattttgggacggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||| ||||||||||||
Sbjct: 31 gacacttattttggaacggagggagta 5
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 113 bits (57), Expect = 5e-25
Identities = 88/97 (90%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
|||||||||||||||||||||| |||||||| |||||||||| ||| ||||| ||||| |
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 72 acaaagttg-gacacttattttgggacggagggagta 107
| ||||||| |||||||||||||||||||| ||||||
Sbjct: 41 ataaagttgagacacttattttgggacggatggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtctcaa 42
||||||| ||||||||||||||||||||||||
Sbjct: 4 atactccatccgtcccaaaataagtgtctcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
|||| ||||||||||||||||||||||
Sbjct: 75 gacagttattttgggacggagggagta 101
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 111 bits (56), Expect = 2e-24
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagct 68
||||| |||||| |||| ||||||||||||| ||||||| ||||| ||| ||||||||||
Sbjct: 2 atatattccctcggtcctaaaataagtgtcttaagcttagtacaactttgtactagagct 61
Query: 69 aatacaaagttg-gacacttattttgggacggagggagta 107
|||||||||||| |||| |||||||| |||||||||||||
Sbjct: 62 aatacaaagttgagacagttattttgagacggagggagta 101
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaataagtgtctcaa 42
||||||||||||||| |||||||| ||||||||
Sbjct: 103 tatactccctccgtctcaaaataactgtctcaa 71
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 111 bits (56), Expect = 2e-24
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagcta 69
||||| |||||||||||||||||||||||| ||||||| ||||||||||||| ||||||
Sbjct: 3 tataccccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagcta 62
Query: 70 atacaaagtt-ggacacttattttgggacggagggagtaa 108
||||||||| |||| ||||||||||||||||||||||
Sbjct: 63 gtacaaagttaagacagatattttgggacggagggagtaa 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggaggg 103
|||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggg 9
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 88/98 (89%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaa 70
||||||||||||||||||||||||||||| |||||| || || ||| |||||||| ||
Sbjct: 4 atactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatag 63
Query: 71 tacaaagttg-gacacttattttgggacggagggagta 107
|||||||||| |||||||||||||||| ||||||||||
Sbjct: 64 tacaaagttgagacacttattttgggatggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||| ||||||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtctcaa 71
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 88/98 (89%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaa 70
||||||||||||| ||||||||| | ||||||||||| ||||| ||| |||||||||||
Sbjct: 102 atactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctag 43
Query: 71 tacaaagttg-gacacttattttgggacggagggagta 107
|||||| ||| |||||||||||||| ||||||||||||
Sbjct: 42 tacaaatttgagacacttattttggaacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||| ||||||||||||||||||
Sbjct: 3 tatactccctccgttccaaaataagtgtctcaa 35
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
|||||||||||||||||||||| ||||| ||||||| || || ||||||||||| ||| |
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 72 acaaagttg-gacacttattttgggacggagggagta 107
| ||||||| |||| ||||||||||||||||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtctcaa 42
||||||||||||||||||||||| ||||||||
Sbjct: 102 atactccctccgtcccaaaataactgtctcaa 71
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagtaa 108
|||| |||||||||||||||||||||||
Sbjct: 31 gacagttattttgggacggagggagtaa 4
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
||||||||||||| ||||||||||||||||||| || ||||| ||| ||||| || || |
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 72 acaaagtt-ggacacttattttgggacggagggagta 107
|||||||| |||||||||||||||||||||||||||
Sbjct: 65 acaaagttaagacacttattttgggacggagggagta 101
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtct 39
||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtct 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
||||||||||||| |||||||||||||
Sbjct: 31 gacacttattttgagacggagggagta 5
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 88/99 (88%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagcta 69
||||||||||||||||||||||||||||||||| |||| ||||| ||| |||||||| ||
Sbjct: 103 tatactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagtta 44
Query: 70 atacaaagttg-gacacttattttgggacggagggagta 107
| ||| ||| |||||||||||||||||||| ||||||
Sbjct: 43 gtgtaaaattgagacacttattttgggacggaaggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||| ||||||||||||||||||||||||
Sbjct: 5 tactccttccgtcccaaaataagtgtctcaa 35
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||||||||
Sbjct: 75 gacacttattttgggacggagggagta 101
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 99.6 bits (50), Expect = 8e-21
Identities = 88/98 (89%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaa 70
|||||| |||||||||||||||| |||||||||| || ||||| ||| ||||||| |||
Sbjct: 4 atactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactag 63
Query: 71 tacaaagttg-gacacttattttgggacggagggagta 107
|||||||||| |||||||||||||||| ||||||||||
Sbjct: 64 tacaaagttgagacacttattttggga-ggagggagta 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||| ||||||||||||||||||||
Sbjct: 100 tactccctcc-tcccaaaataagtgtctcaa 71
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 86/97 (88%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
|||||||||||||||||||||| ||||| ||||||| || || |||||| |||| ||| |
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 72 acaaagttg-gacacttattttgggacggagggagta 107
| ||||||| |||| ||||||||||||||||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtctcaa 42
||||||||||||||||||||||| ||||||||
Sbjct: 102 atactccctccgtcccaaaataactgtctcaa 71
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagtaa 108
|||| |||||||||||||||||||||||
Sbjct: 31 gacagttattttgggacggagggagtaa 4
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 86/97 (88%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
||||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||| |
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 72 acaaagttg-gacacttattttgggacggagggagta 107
|||| |||| |||| |||||||| ||| |||||||||
Sbjct: 65 acaatgttgagacagttattttgagacagagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
||||||||||||| |||||||||||||
Sbjct: 31 gacacttattttgagacggagggagta 5
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 86/97 (88%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
|||||||||||||||||||||| | |||||| |||| ||||| ||||||||||||||| |
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 72 acaaagttg-gacacttattttgggacggagggagta 107
||||||| || |||||||||| |||||||||||||
Sbjct: 65 gtaaagttgagatacttattttgagacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
||||||||||||| |||||||||| ||||||
Sbjct: 101 tactccctccgtctcaaaataagtatctcaa 71
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 95.6 bits (48), Expect = 1e-19
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagct 68
||||||||||||| || |||||||| ||||||||||||| ||||| ||| || |||||||
Sbjct: 2 atatactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagct 61
Query: 69 aatacaaagttg-gacacttattttgggacggagggagta 107
| |||||||||| |||||||||||||| | |||||||||
Sbjct: 62 agtacaaagttgagacacttattttggaagagagggagta 101
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 93.7 bits (47), Expect = 5e-19
Identities = 87/99 (87%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagcta 69
||||||| |||||| ||||||||||||| ||||||| || ||||||||||||||||||
Sbjct: 3 tatactctctccgttttaaaataagtgtcttaagcttagtataattttatactagagcta 62
Query: 70 atacaaagtt-ggacacttattttgggacggagggagta 107
|||||||| |||| ||||||||||||||||||||||
Sbjct: 63 gaacaaagttaagacaattattttgggacggagggagta 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataattgtct 74
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 91.7 bits (46), Expect = 2e-18
Identities = 87/98 (88%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaa 70
|||||||||||||| |||||||| |||||||| ||| ||||| ||| |||||||||||
Sbjct: 4 atactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctag 62
Query: 71 tacaaagttg-gacacttattttgggacggagggagta 107
|||||||||| |||| ||||||||||| ||||||||||
Sbjct: 63 tacaaagttgagacagttattttgggatggagggagta 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||| ||||||||||| ||||||||
Sbjct: 100 tactccctccatcccaaaataactgtctcaa 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 71 tacaaagttg-gacacttattttgggacggagggagta 107
|||||||||| |||| |||||||| |||||||||||||
Sbjct: 42 tacaaagttgagacagttattttgagacggagggagta 5
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 85/97 (87%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
|||||||||||||||||||||| | |||||| |||| ||||| ||||||||||||||| |
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 72 acaaagttg-gacacttattttgggacggagggagta 107
|||| || || |||||||||| |||||||||||||
Sbjct: 65 gtaaagctgagatacttattttgagacggagggagta 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctca 41
||||||||||||| |||||||||| |||||
Sbjct: 101 tactccctccgtctcaaaataagtatctca 72
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 87.7 bits (44), Expect = 3e-17
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagct 68
||||||||| ||||| | |||||||||||||||| |||| || || ||||||||| ||||
Sbjct: 2 atatactccttccgttctaaaataagtgtctcaatcttagtataactttatactaaagct 61
Query: 69 aatacaaagtt-ggacacttattttgggacggagggagta 107
|||||||| || ||||||||||||||| ||||||||||
Sbjct: 62 aatacaaaattaacacacttattttgggatggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgt 37
||||||||||| |||||||||||||||
Sbjct: 102 atactccctccatcccaaaataagtgt 76
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 77.8 bits (39), Expect = 3e-14
Identities = 82/95 (86%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
||||| |||| || ||||||||||||||||| || ||||| ||| || || ||||| |
Sbjct: 101 tactcactccatctcaaaataagtgtctcaactctagtacaactttgtattaaagctagt 42
Query: 72 acaaagttg-gacacttattttgggacggagggag 105
||||||||| |||||||||||||||||||||||||
Sbjct: 41 acaaagttgagacacttattttgggacggagggag 7
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 14 ctccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaa 70
||||||||||| | |||||||| ||| ||| ||||| ||||| ||| |||||||||||
Sbjct: 4 atactccctccatttcaaaataattgtttcatgcttagtacaactttgtactagagctag 63
Query: 71 tacaaagttg-gacacttattttgggacggagggagta 107
|||||||||| |||| |||||||| ||||||||||||
Sbjct: 64 tacaaagttgagacatttattttgaaacggagggagta 101
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 69.9 bits (35), Expect = 7e-12
Identities = 75/87 (86%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 22 gtcccaaaataagtgtctcaagcttaatacaattttatactagagctaatacaaagttg- 80
|||||||||||| | |||||| |||| ||||| ||||||||||||||| |||||||
Sbjct: 91 gtcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttga 32
Query: 81 gacacttattttgggacggagggagta 107
||||| ||||||| |||||||||||||
Sbjct: 31 gacacctattttgagacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 ggacacttattttgggacggagggagta 107
||||| ||||||||||||||||||||||
Sbjct: 88 ggacagttattttgggacggagggagta 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
||||||||||||| ||||||| |||||||||
Sbjct: 5 tactccctccgtctcaaaataggtgtctcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
|||||||||||||||||||||| ||||
Sbjct: 115 tactccctccgtcccaaaataactgtc 89
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 67.9 bits (34), Expect = 3e-11
Identities = 87/104 (83%), Gaps = 8/104 (7%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctca-------agcttaatacaattttatactag 64
|||||||||||||||||||||||||||| |||||| ||||| ||| |||||
Sbjct: 5 tactccctccgtcccaaaataagtgtcttgtgtcttgagcttagtacaactttgtactaa 64
Query: 65 agctaatacaaagttg-gacacttattttgggacggagggagta 107
|| || |||||||||| |||||||||||||||| ||||||||||
Sbjct: 65 agttagtacaaagttgagacacttattttgggatggagggagta 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtctcaa 42
||||||||||| ||||||||||||||||||||
Sbjct: 109 atactccctccatcccaaaataagtgtctcaa 78
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 82/97 (84%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
||||||||||||| |||||||| ||||| || |||| || || |||||| || ||||| |
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 72 acaaagtt-ggacacttattttgggacggagggagta 107
|||||||| |||| ||||||||| || |||||||||
Sbjct: 41 acaaagttaagacagttattttggaacagagggagta 5
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaataagtgtctcaagcttaatacaattttatacta 63
||||||| |||||||||||||||||||||||||| |||| ||||| ||||||||
Sbjct: 92 atatacttcctccgtcccaaaataagtgtctcaa-cttagtacaaagttatacta 39
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 14 ctccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||| ||||
Sbjct: 63 gacacttattttgggacggaggaagta 89
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaataagtgtctcaag 43
|||||||||||||||||||||||| |||||||||
Sbjct: 151 tatactccctccgtcccaaaataactgtctcaag 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 14 ctccctccgtcccaaaataagtgtctcaagcttaatacaa 53
|||||| |||||||||||||||||||||| |||| |||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaa 46
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 37 tctcaagcttaatacaattttatactagagctaatacaaagttg-gacacttattttggg 95
|||||| |||| ||||| ||| ||||| || || |||||| ||| |||| ||||||||||
Sbjct: 78 tctcaaccttagtacaactttgtactaaagttagtacaaacttgagacagttattttggg 137
Query: 96 acggagggagta 107
||||||||||||
Sbjct: 138 acggagggagta 149
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 aatatactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||||||
Sbjct: 1 aatatactccctccgtcccaaaataagtg 29
Score = 54.0 bits (27), Expect = 4e-07
Identities = 87/102 (85%), Gaps = 5/102 (4%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaataagtgtctcaagcttaatac-aattttatactagagct 68
||||||||||||||||| ||||||||| ||||| ||| ||| |||||| ||||| | |
Sbjct: 105 tatactccctccgtcccgaaataagtgactcaa-ctttgtactaattttgtactaaaaat 47
Query: 69 aatacaaagttg-ga--cacttattttgggacggagggagta 107
| || ||||||| || |||||||||||||||||||||||||
Sbjct: 46 agtataaagttgagatccacttattttgggacggagggagta 5
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 aatatactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||||||
Sbjct: 1 aatatactccctccgtcccaaaataagtg 29
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagta 5
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaataagtgtctcaa 42
||||||||||||||||||||||||||| |||||
Sbjct: 114 tatactccctccgtcccaaaataagtgactcaa 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaataagtgtctcaa 42
|||||||||||| ||||||||||||||| |||||
Sbjct: 2 atatactccctctgtcccaaaataagtgactcaa 35
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 88 cacttattttgggacggagggagta 112
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaataagtgtctcaa 42
||||||||||||||||||||||||||| |||||
Sbjct: 102 tatactccctccgtcccaaaataagtgactcaa 70
Score = 52.0 bits (26), Expect = 2e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 71 tacaaagttg-gacacttattttgggacggagggagta 107
|||||||||| | |||||||||||||||||||||||||
Sbjct: 63 tacaaagttgagtcacttattttgggacggagggagta 100
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 58.0 bits (29), Expect = 3e-08
Identities = 82/97 (84%), Gaps = 2/97 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatactagagctaat 71
||||||||||||| |||||||| ||||||||||||| || || ||| |||| ||||| |
Sbjct: 100 tactccctccgtctcaaaataattgtctcaagcttagtataactttgcacta-agctagt 42
Query: 72 acaaagtt-ggacacttattttgggacggagggagta 107
| ||| || || |||||||||| |||||||||||||
Sbjct: 41 ataaaattaagaaacttattttgagacggagggagta 5
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctc 40
|||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctc 33
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/39 (94%), Gaps = 2/39 (5%)
Strand = Plus / Minus
Query: 71 tacaaagttgga--cacttattttgggacggagggagta 107
|||||||||||| |||||||||||||||||||||||||
Sbjct: 43 tacaaagttggagacacttattttgggacggagggagta 5
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaataagtgtc 38
|||||||||||||||||||||||||||||
Sbjct: 104 tatactccctccgtcccaaaataagtgtc 76
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtc 38
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||||||||
Sbjct: 76 gacacttattttgggacggagggagta 102
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||||||| |||||
Sbjct: 4 atactccctccgtcccaaaataagtgactcaa 35
Score = 52.0 bits (26), Expect = 2e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 71 tacaaagttg-gacacttattttgggacggagggagta 107
|||||||||| | |||||||||||||||||||||||||
Sbjct: 42 tacaaagttgagtcacttattttgggacggagggagta 5
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtctca 41
||||||||||||| |||||||||||||||||
Sbjct: 131 atactccctccgttccaaaataagtgtctca 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||| ||||||||||||
Sbjct: 104 gacacttattttggaacggagggagta 130
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
||||||||||||||||||||||||| |||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaa 81
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 87 cacttattttgggacggagggagta 111
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 8 aatatactccctccgtcccaaaataagtgtctcaa 42
||||||||||||| ||||||||||||||| |||||
Sbjct: 1 aatatactccctctgtcccaaaataagtgactcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||| |||||| |||||
Sbjct: 90 tactccctccgtcccaaattaagtgactcaa 60
Score = 44.1 bits (22), Expect = 4e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 71 tacaaagttg-gacacttattttgggacggagggagta 107
|||||||||| | ||||||||||||||| |||||||||
Sbjct: 42 tacaaagttgagtcacttattttgggacagagggagta 5
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 220 cacttattttgggacggagggagta 244
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa Japonica
Group
Length = 247
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 82 acacttattttgggacggagggagta 107
||||||||||||||||||||||||||
Sbjct: 27 acacttattttgggacggagggagta 2
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgt 37
||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtgt 27
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagtaa 108
||||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagtaa 1
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagtaa 108
|||||||||||||||||||| |||||
Sbjct: 219 cacttattttgggacggaggtagtaa 244
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagtaa 108
||||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagtaa 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 1 atactacctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagtaa 108
||||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagtaa 1
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagtaa 108
||||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagtaa 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagta 240
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagta 5
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa Japonica
Group
Length = 246
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 244 atactacctccgtcccaaaataagtg 219
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 245 tactccctccgtcccaaaataagtg 221
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 221 cacttattttgggacggagggagta 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 1 atactacctccgtcccaaaataagtg 26
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagta 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 1 atacttcctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 245 atactacctccgtcccaaaataagtg 220
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaataagtgtc 38
||||||||| |||||||||||||||||||
Sbjct: 84 tatactcccaccgtcccaaaataagtgtc 56
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
||||||||||||||||||| |||||||
Sbjct: 56 gacacttattttgggacggtgggagta 82
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 50.1 bits (25), Expect = 7e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 71 tacaaagttg-gacacttattttgggacggagggagtaaca 110
|||||||||| | |||||| |||||||||||||||||||||
Sbjct: 42 tacaaagttgagtcacttaatttgggacggagggagtaaca 2
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||| |||||| |||||
Sbjct: 5 tactccctccgtcccaaattaagtgactcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||| |||||| |||||
Sbjct: 113 tactccctccgtcccaaattaagtgactcaa 83
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtg 87
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 cacttattttgggacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 87 cacttattttgggacggagggagta 111
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaataa 33
|||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 156 tactccctccgtcccaaaataa 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 135 ttattttgggacggagggagta 156
>RF00906;MIR1122;AC137999.2/12932-12822 39947:Oryza sativa
Japonica Group
Length = 111
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 aatatactccctccgtcccaaaata 32
|||||||||||||||||||||||||
Sbjct: 1 aatatactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02004295.1/15025-15180 39946:Oryza sativa
Indica Group
Length = 156
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 aatatactccctccgtcccaaaata 32
|||||||||||||||||||||||||
Sbjct: 156 aatatactccctccgtcccaaaata 132
>RF00906;MIR1122;AC093953.2/44822-44955 39947:Oryza sativa Japonica
Group
Length = 134
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 aatatactccctccgtcccaaaata 32
|||||||||||||||||||||||||
Sbjct: 134 aatatactccctccgtcccaaaata 110
>RF00906;MIR1122;AK288180.1/1387-1262 39947:Oryza sativa Japonica
Group
Length = 126
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 aatatactccctccgtcccaaaata 32
|||||||||||||||||||||||||
Sbjct: 126 aatatactccctccgtcccaaaata 102
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataag 34
||||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataag 24
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 cttattttgggacggagggagta 107
|||||||||||||||||||||||
Sbjct: 24 cttattttgggacggagggagta 2
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataag 34
||||||||||||||||||||||||
Sbjct: 240 atactccctccgtcccaaaataag 217
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 cttattttgggacggagggagta 107
|||||||||||||||||||||||
Sbjct: 217 cttattttgggacggagggagta 239
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 81 gacacttattttgggacggaggga 104
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tccctccgtcccaaaataagtgtc 38
||||||||||||||||||||||||
Sbjct: 8 tccctccgtcccaaaataagtgtc 31
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaagcttaatacaattttatacta 63
||||||| ||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 101 tactcccgccgtcccaaaataagtgtcgctgatttaatacaactttatacta 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
||||||||||||||||||| |||||||
Sbjct: 75 gacacttattttgggacggcgggagta 101
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtc 38
||||||||||||||| ||||||||||||
Sbjct: 103 atactccctccgtcctaaaataagtgtc 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||| ||||||||||||||
Sbjct: 76 gacacttattttaggacggagggagta 102
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtc 38
|||||||||| |||||||||||||||||
Sbjct: 103 atactccctctgtcccaaaataagtgtc 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
||||||||||||||||| |||||||||
Sbjct: 76 gacacttattttgggacagagggagta 102
>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 83/100 (83%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaataagtgtctcaagctt-aatacaattttatactagagct 68
|||||||||||||| |||||||| ||| | || ||| |||||||||||||||| | |
Sbjct: 3 tatactccctccgtttcaaaataactgttttaaacttaaatacaattttatactgaaatt 62
Query: 69 aatacaaagtt-ggacacttattttgggacggagggagta 107
|||| |||||| |||| |||||||| |||||||| ||||
Sbjct: 63 aatataaagttaagacagttattttgagacggaggaagta 102
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||||||| |||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtct 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||| ||||||||||
Sbjct: 75 gacacttattttgggatggagggagta 101
>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa
Indica Group
Length = 143
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02003593.1/26423-26497 39946:Oryza sativa
Indica Group
Length = 75
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 74 atatactccctccgtcccaaaata 51
>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa Japonica
Group
Length = 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 120 atatactccctccgtcccaaaata 97
>RF00906;MIR1122;AP004047.3/87830-87972 39947:Oryza sativa
Japonica Group
Length = 143
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AC210489.1/47612-47477 4538:Oryza glaberrima
(African rice)
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaaca 110
||||||||||||||||||||||||
Sbjct: 112 tattttgggacggagggagtaaca 135
>RF00906;MIR1122;AC226266.1/92361-92224 63629:Oryza minuta
Length = 138
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 137 atatactccctccgtcccaaaata 114
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 84 acttattttgggacggagggagta 107
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagt 35
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 109 atatactccctccgtcccaaaata 86
>RF00906;MIR1122;AC217198.1/19286-19151 4537:Oryza punctata
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaaca 110
||||||||||||||||||||||||
Sbjct: 112 tattttgggacggagggagtaaca 135
>RF00906;MIR1122;AAAA02017235.1/6057-5946 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 111 atatactccctccgtcccaaaata 88
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
Group
Length = 130
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 129 atatactccctccgtcccaaaata 106
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataag 34
||||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataag 27
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 cttattttgggacggagggagta 107
|||||||||||||||||||||||
Sbjct: 27 cttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataag 34
|||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataag 71
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 cttattttgggacggagggagta 107
|||||||||||||||||||||||
Sbjct: 71 cttattttgggacggagggagta 93
>RF00906;MIR1122;AAAA02006274.1/23456-23551 39946:Oryza sativa
Indica Group
Length = 96
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 95 atatactccctccgtcccaaaata 72
>RF00906;MIR1122;AP008215.1/19940245-19940356 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 111 atatactccctccgtcccaaaata 88
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 85 atatactccctccgtcccaaaata 62
>RF00906;MIR1122;AP008209.1/554501-554366 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaaca 110
||||||||||||||||||||||||
Sbjct: 112 tattttgggacggagggagtaaca 135
>RF00906;MIR1122;AP003381.3/77030-76947 39947:Oryza sativa
Japonica Group
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01019101.1/4942-4817 39947:Oryza sativa
Japonica Group
Length = 126
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 84 acttattttgggacggagggagtaacaa 111
|||||||||||||||||| |||||||||
Sbjct: 28 acttattttgggacggagagagtaacaa 1
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 cttattttgggacggagggagta 107
|||||||||||||||||||||||
Sbjct: 24 cttattttgggacggagggagta 2
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataag 34
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 236 tactccctccgtcccaaaataa 215
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 215 ttattttgggacggagggagta 236
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AY491681.1/77211-77302 4568:Triticum monococcum
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 90 tatactccctccgtcccaaaata 68
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
|||| ||||||||||||||||||||||
Sbjct: 106 tactacctccgtcccaaaataagtgtc 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
|||||||||||||||||||||| ||||
Sbjct: 80 gacacttattttgggacggaggtagta 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaataagtgtc 38
||||||||| ||||| ||||||||||||||
Sbjct: 2 atatactccttccgttccaaaataagtgtc 31
>RF00906;MIR1122;CR626933.1/11895-11804 4571:Triticum turgidum
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 17 cctccgtcccaaaataagtgtct 39
|||||||||||||||||||||||
Sbjct: 85 cctccgtcccaaaataagtgtct 63
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagg 102
||||||||||||||||||||||
Sbjct: 64 gacacttattttgggacggagg 85
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
||||||||| |||||||||||||||||
Sbjct: 102 tactccctcggtcccaaaataagtgtc 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacggagggagta 107
||||||||||||||||| |||||||||
Sbjct: 76 gacacttattttgggaccgagggagta 102
>RF00906;MIR1122;AAAA02029963.1/5445-5312 39946:Oryza sativa Indica
Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 132 tatactccctccgtcccaaaata 110
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagtaa 108
|||||||||||||||||||||||
Sbjct: 111 ttattttgggacggagggagtaa 133
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaataagt 35
|||||||||||||||| ||||||||||
Sbjct: 119 atatactccctccgtctcaaaataagt 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02018853.1/118-229 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaac 109
|||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtaac 110
>RF00906;MIR1122;AAAA02004642.1/60119-60040 39946:Oryza sativa
Indica Group
Length = 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 aatatactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 80 aatatactccctccgtcccaaaa 58
>RF00906;MIR1122;AACV01013952.1/21314-21199 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 aatatactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 116 aatatactccctccgtcccaaaa 94
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 119 atactccctccgtcccaaaataa 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 97 ttattttgggacggagggagta 118
>RF00906;MIR1122;AP008216.1/16569819-16569686 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 132 tatactccctccgtcccaaaata 110
>RF00906;MIR1122;AACV01011125.1/13959-13873 39947:Oryza sativa
Japonica Group
Length = 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 87 tattttgggacggagggagtaac 109
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtaac 3
>RF00906;MIR1122;AAAA02013097.1/8926-9081 39946:Oryza sativa Indica
Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 87 tattttgggacggagggagtaac 109
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtaac 3
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagtaa 108
|||||||||||||||||||||||
Sbjct: 78 ttattttgggacggagggagtaa 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78
>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
Group
Length = 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 93 tatactccctccgtcccaaaata 71
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagtaa 108
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtaa 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02014383.1/51051-51164 39946:Oryza sativa
Indica Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 aatatactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 1 aatatactccctccgtcccaaaa 23
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagtaa 108
|||||||||||||||||||||||
Sbjct: 92 ttattttgggacggagggagtaa 114
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92
>RF00906;MIR1122;AC025905.3/382-457 4530:Oryza sativa (rice)
Length = 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 aatatactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 76 aatatactccctccgtcccaaaa 54
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AC093492.3/33191-33068 39947:Oryza sativa Japonica
Group
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaac 109
|||||||||||||||||||||||
Sbjct: 100 tattttgggacggagggagtaac 122
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 110 atactccctccgtcccaaaataa 88
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagta 109
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 126 atactccctccgtcccaaaataa 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 104 ttattttgggacggagggagta 125
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa
Indica Group
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 3 tatactccctccgtcccaaaata 25
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 96 atactccctccgtcccaaaata 75
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagtaa 108
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtaa 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP003412.4/28754-28834 39947:Oryza sativa
Japonica Group
Length = 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 aatatactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 81 aatatactccctccgtcccaaaa 59
>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa
Indica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||| ||||||||||||||||||
Sbjct: 1 atactccatccgtcccaaaataagtg 26
>RF01058;MIR806;AC137621.2/17491-17729 39947:Oryza sativa Japonica
Group
Length = 239
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF01058;MIR806;AP008218.1/7228032-7227791 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF01058;MIR806;AACV01010423.1/14473-14229 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 tatactccctccgtcccaaaat 31
||||||||||||||||||||||
Sbjct: 140 tatactccctccgtcccaaaat 119
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaataagtgtc 38
|||||||||||||||| ||||||||||||
Sbjct: 2 atatactccctccgtcttaaaataagtgtc 31
>RF00906;MIR1122;AF427791.1/40179-40064 4513:Hordeum vulgare
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaataagtgtctcaa 42
|||||||| ||||||| ||||||||||| |||||
Sbjct: 2 atatactctctccgtctcaaaataagtgactcaa 35
>RF00906;MIR1122;EF059989.1/24895-24770 29664:Brachypodium
sylvaticum
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||| ||||||
Sbjct: 4 atactccctccgtcccaaattaagtg 29
>RF00906;MIR1122;EU730899.1/86003-86096 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
|||| |||||||||||||||||||||
Sbjct: 91 ataccccctccgtcccaaaataagtg 66
>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 37 atactccctccgtcccaaaata 58
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 128 atactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02025635.1/7223-7330 39946:Oryza sativa
Indica Group
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagta 109
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 159 atactccctccgtcccaaaata 138
>RF00906;MIR1122;AAAA02012747.1/1212-1288 39946:Oryza sativa
Indica Group
Length = 77
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 76 atatactccctccgtcccaaaa 55
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02036662.1/2377-2433 39946:Oryza sativa Indica
Group
Length = 57
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 33 tattttgggacggagggagtaa 54
>RF00906;MIR1122;AAAA02005537.1/4098-4188 39946:Oryza sativa Indica
Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 67 tattttgggacggagggagtaa 88
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;ABRL01001046.1/3877-3720 65489:Oryza barthii
Length = 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagtaacaa 111
||||||| ||||||||||||||||||
Sbjct: 26 ttattttaggacggagggagtaacaa 1
>RF00906;MIR1122;AP002972.3/107404-107293 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtaa 4
>RF00906;MIR1122;AAAA02020504.1/20392-20526 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111
>RF00906;MIR1122;CR855084.1/66223-66112 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 111 atatactccctccgtcccaaaa 90
>RF00906;MIR1122;AP008210.1/31519155-31519262 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 84 tattttgggacggagggagtaa 105
>RF00906;MIR1122;AAAA02025080.1/2043-2177 39946:Oryza sativa Indica
Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtaa 4
>RF00906;MIR1122;AC215820.3/114332-114188 4537:Oryza punctata
Length = 145
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 146 atactccctccgtcccaaaata 125
>RF00906;MIR1122;AAAA02026694.1/32137-32261 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101
>RF00906;MIR1122;AP008210.1/17746245-17746133 39947:Oryza sativa
Japonica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 112 atatactccctccgtcccaaaa 91
>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tatactccctccgtcccaaaat 31
||||||||||||||||||||||
Sbjct: 3 tatactccctccgtcccaaaat 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 113 atactccctccgtcccaaaata 92
>RF00906;MIR1122;AP008212.1/25859487-25859353 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111
>RF00906;MIR1122;AAAA02007975.1/29302-29380 39946:Oryza sativa
Indica Group
Length = 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 128 atactccctccgtcccaaaata 107
>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02028034.1/27580-27414 39946:Oryza sativa
Indica Group
Length = 167
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 164 atactccctccgtcccaaaata 143
>RF00906;MIR1122;AP003913.3/29133-29264 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtaa 4
>RF00906;MIR1122;AP004259.2/7530-7458 39947:Oryza sativa Japonica
Group
Length = 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 72 atatactccctccgtcccaaaa 51
>RF00906;MIR1122;CR855143.1/66136-66012 4530:Oryza sativa (rice)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 101 tattttgggacggagggagtaa 122
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 93 atactccctccgtcccaaaata 72
>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01024869.1/7310-7232 39947:Oryza sativa
Japonica Group
Length = 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 76 atactccctccgtcccaaaata 55
>RF00906;MIR1122;AP008216.1/14356287-14356423 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 atatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaa 23
>RF00906;MIR1122;AP003883.3/40264-40104 39947:Oryza sativa
Japonica Group
Length = 161
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008213.1/15559796-15559689 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 84 tattttgggacggagggagtaa 105
>RF00906;MIR1122;AC226706.2/62906-62750 63629:Oryza minuta
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 154 atactccctccgtcccaaaata 133
>RF00906;MIR1122;AAAA02004209.1/3478-3367 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtaa 4
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008215.1/18970521-18970611 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataa 72
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 72 ttattttgggacggagggagta 93
>RF00906;MIR1122;AL606691.4/2041-1917 39947:Oryza sativa Japonica
Group
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 101 tattttgggacggagggagtaa 122
>RF00906;MIR1122;AP008208.1/1673372-1673471 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 76 tattttgggacggagggagtaa 97
>RF00906;MIR1122;AY947286.1/128-10 4530:Oryza sativa (rice)
Length = 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02029631.1/6082-5948 39946:Oryza sativa Indica
Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 134 atatactccctccgtcccaaaa 113
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 ttattttgggacggagggagta 107
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008207.1/24395058-24395107 39947:Oryza sativa
Japonica Group
Length = 50
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 47 atactccctccgtcccaaaata 26
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa
Japonica Group
Length = 107
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;CR855160.1/7113-7006 4530:Oryza sativa (rice)
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tattttgggacggagggagtaa 108
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtaa 4
