miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 295 bits (149), Expect = 1e-79
Identities = 161/165 (97%)
Strand = Plus / Minus
Query: 11 ctactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacg 70
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacg 106
Query: 71 gatgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacata 130
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gatgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatc 46
Query: 131 tagtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 45 tagtgaaatcgcttaaaagacttatatttaggaacggagggagta 1
Score = 73.8 bits (37), Expect = 8e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
|||||||||||||||||||||||||||||| || ||||||||||| | ||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 72 a 72
|
Sbjct: 61 a 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 131 tagtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
|||||||||| || ||||||||||||||||||||||||| ||||
Sbjct: 120 tagtgaaatctctacaaagacttatatttaggaacggagggagta 164
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 190 bits (96), Expect = 5e-48
Identities = 147/164 (89%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
|||||||||||||||||||||||||||||| ||||| |||||||||| | |||||| |||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 72 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatat 131
||||||||||||||| |||||| | || ||||| |||||||||||||||||||| | | |
Sbjct: 61 atgtatatagacatattttagaatatagattcactcattttgctccgtatgtagtcgtct 120
Query: 132 agtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
|| |||||| || |||||||||||||||||||||||||| ||||
Sbjct: 121 agcgaaatctctaaaaagacttatatttaggaacggagggagta 164
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 10 tctactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatac 69
|||||||||||||||||||||||||||||||| |||||||||| |||| | ||||||||
Sbjct: 166 tctactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatac 107
Query: 70 gga 72
|||
Sbjct: 106 gga 104
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 131 tagtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
|||||||| | || |||||||||||||||||||||||||| ||||
Sbjct: 45 tagtgaaacctctaaaaagacttatatttaggaacggagggagta 1
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 163 bits (82), Expect = 1e-39
Identities = 146/166 (87%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
|||||||||||||||||||||||||||||| |||| ||||||||| || ||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 72 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatat 131
|||||||||||||||| ||||||| | ||||| |||||||||||| ||||||| | |
Sbjct: 105 atgtatatagacatac-ttagagtacagattcactcattttgctccatatgtagcccctt 47
Query: 132 agtgaaatcgcttaaaagacttatatttaggaacggaggaagtatt 177
|| |||||| || |||||||||| ||||||||||||||| ||||||
Sbjct: 46 agagaaatctctaaaaagacttacatttaggaacggagggagtatt 1
Score = 73.8 bits (37), Expect = 8e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacata 68
|||||||||||||||||||| ||||||||| |||||||||| ||| ||||||||||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacata 59
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 145 aaaagacttatatttaggaacggaggaagta 175
|||||||||||||||||||||||||| ||||
Sbjct: 135 aaaagacttatatttaggaacggagggagta 165
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 151 bits (76), Expect = 4e-36
Identities = 144/164 (87%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
|||||||||||||||||||||||||||||| ||||||||| | || ||| ||||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaata-tggactacatacgg 108
Query: 72 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatat 131
||| |||||||| || ||||||||||| ||||| |||||||||||||||||||| | ||
Sbjct: 107 atgaatatagacgtattttagagtgtagattcactcattttgctccgtatgtagtc-cat 49
Query: 132 agtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
| | |||| || ||||||||||||||||||||| |||| ||||
Sbjct: 48 attagaatctctaaaaagacttatatttaggaacagagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatt 50
||||||||| |||||||||||||||||||| ||||||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttagagatt 43
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 136 aaatcgcttaaaagacttatatttaggaacggaggaagtat 176
||||| || |||||||||||||||||||||||||| |||||
Sbjct: 127 aaatctctaaaaagacttatatttaggaacggagggagtat 167
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 135 bits (68), Expect = 2e-31
Identities = 143/164 (87%), Gaps = 3/164 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
||||||||||||||||||||||||||||| ||||| |||||||| |||| | ||||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttcgtagatatttcact-gtggaccacatacgg 107
Query: 72 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatat 131
||||||||||| | |||| ||||| ||||| ||||||| |||||||||| | | |||
Sbjct: 106 atgtatatagatgcatttta-tgtgtagattcactcatttttctccgtatgtggtc-tat 49
Query: 132 agtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
||||||||| || ||||||||||||||||||||||||| ||||
Sbjct: 48 agtgaaatctctccaaagacttatatttaggaacggagggagta 5
Score = 83.8 bits (42), Expect = 8e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataagtctttgtagagatttcacta 56
|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataagtctttggagagatttcacta 49
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 147 aagacttatatttaggaacggaggaagta 175
|||||||||||||||||||||||| ||||
Sbjct: 137 aagacttatatttaggaacggagggagta 165
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 121 bits (61), Expect = 4e-27
Identities = 141/165 (85%), Gaps = 2/165 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
|||||||||| |||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcacta-tggaccacatacgg 105
Query: 72 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatat 131
|||||| |||| | |||||||| || |||| ||||||| |||||||||| | | ||
Sbjct: 104 atgtatgtagatgcattttagagtataggttcactcattttactccgtatgtggtc-cat 46
Query: 132 agtgaaatcgcttaaaagacttatatttaggaacggaggaagtat 176
| ||||||| | ||||||||||||||||||||||||| |||||
Sbjct: 45 aatgaaatctgtccaaagacttatatttaggaacggagggagtat 1
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttca 53
||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttca 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 130 atagtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
||||||||||| || ||||||||||||||||||| ||||| ||||
Sbjct: 118 atagtgaaatctctacaaagacttatatttaggaatggagggagta 163
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 121 bits (61), Expect = 4e-27
Identities = 140/165 (84%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
||||||||||||||||||||||||| | || |||||||| |||| | ||||||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacgg 59
Query: 72 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatat 131
||||| ||||||||| |||||||| || ||||| |||||||||||||||||||| | |
Sbjct: 60 atgtacatagacatattttagagtatagattcactcattttgctccgtatgtagtctcct 119
Query: 132 agtgaaatcgcttaaaagacttatatttaggaacggaggaagtat 176
|||||||| || ||| | ||||||||| |||||||||| |||||
Sbjct: 120 agtgaaatacctaaaaggtcttatattttggaacggagggagtat 164
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
||||||||||||||| ||||||||| | || ||| |||||||||| | ||||||||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 72 a 72
|
Sbjct: 103 a 103
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 121 bits (61), Expect = 4e-27
Identities = 140/165 (84%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacg 70
|||||||||||||||||||||||||| | || |||||||| |||| | |||||||||
Sbjct: 3 ctactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacg 61
Query: 71 gatgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacata 130
|||||| ||||||||| |||||||| || |||| |||||||||||||||||||| | |
Sbjct: 62 gatgtacatagacatattttagagtatagattcgctcattttgctccgtatgtagtcttc 121
Query: 131 tagtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
||||||||| || ||| | ||||||||| |||||||||| ||||
Sbjct: 122 tagtgaaatacctaaaaggtcttatattttggaacggagggagta 166
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
||||||||||||||| ||||||||| | || ||| |||||||||| | ||||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 72 a 72
|
Sbjct: 106 a 106
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 119 bits (60), Expect = 1e-26
Identities = 140/164 (85%), Gaps = 7/164 (4%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
||||||||||||||||||||||||||||||||||||||| ||||| ||| | |||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccacta-tggaccacata--- 60
Query: 72 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatat 131
||||||||| | ||||||||||| ||||| |||||||||| ||||||||| | ||
Sbjct: 61 --gtatatagatgcattttagagtgtagattcactcattttgcttcgtatgtagtc-cat 117
Query: 132 agtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
||||||||| || | ||||||||||||||||||||||| ||||
Sbjct: 118 agtgaaatctctacagagacttatatttaggaacggagggagta 161
Score = 85.7 bits (43), Expect = 2e-16
Identities = 56/59 (94%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacg 70
|||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcacta-tggactacatacg 104
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggaggaagta 175
||||||||||||||||||||||||| ||||
Sbjct: 34 aaagacttatatttaggaacggagggagta 5
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 113 bits (57), Expect = 9e-25
Identities = 140/165 (84%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacg 70
|||||||||||||||||||||||||| | || ||||||| |||||| | |||||||||
Sbjct: 1 ctactccctccgttcctaaatataagaccttttagagatctcacta-taaactacatacg 59
Query: 71 gatgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacata 130
||||||| ||| |||| ||| | |||| ||||| |||||||||||||||||||| | ||
Sbjct: 60 gatgtatgtagtcatattttgggatgtaaattcactcattttgctccgtatgtagtc-ta 118
Query: 131 tagtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
||||||||| | ||| | |||||||||||||||||||| ||||
Sbjct: 119 tagtgaaatttgtaaaaggtcttatatttaggaacggagggagta 163
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||||||||||||||||
Sbjct: 164 ctactccctccgttcctaaatataag 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 129 tatagtgaaatcgcttaaaagacttatatttaggaacggaggaagta 175
|||||||| ||| || ||| | |||||||||||||||||||| ||||
Sbjct: 48 tatagtgagatctctaaaaggtcttatatttaggaacggagggagta 2
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 105 bits (53), Expect = 2e-22
Identities = 134/165 (81%), Gaps = 17/165 (10%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
|||||||||||||||||||||||||||||| ||| ||||| |||||| ||| ||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttaaagaagtttcattagtggactatatacgg 64
Query: 72 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatat 131
||||||||||||||| | |||||||||||||||||||||| |
Sbjct: 65 atgtatatagacata-----------------actcattttgctccgtatgtagactact 107
Query: 132 agtgaaatcgcttaaaagacttatatttaggaacggaggaagtat 176
|||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 108 agtgaaatatcttaaaagacttatatttaggaacggagggagtat 152
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
|||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 72 a 72
|
Sbjct: 91 a 91
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggaggaagtat 176
||||||||||||||||||||||||| |||||
Sbjct: 34 aaagacttatatttaggaacggagggagtat 4
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 81.8 bits (41), Expect = 3e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 100 attcaatcattttgctccgtatgtagacatatagtgaaatcgcttaaaagacttatattt 159
||||| |||||||||||||||||||| | |||||| |||| || |||||||||||||||
Sbjct: 79 attcactcattttgctccgtatgtagtcc-atagtgtaatctctaaaaagacttatattt 21
Query: 160 aggaacggaggaagtat 176
||||||||||| |||||
Sbjct: 20 aggaacggagggagtat 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
|||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacacta-tggactacatacgg 63
Query: 72 a 72
|
Sbjct: 64 a 64
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 16 ccctccgttcctaaatataagtctttgtagagatt 50
||||||||||||||||||||||| || ||||||||
Sbjct: 111 ccctccgttcctaaatataagtccttttagagatt 77
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 gacttatatttaggaacggagg 170
||||||||||||||||||||||
Sbjct: 89 gacttatatttaggaacggagg 110
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 108 attttgctccgtatgtagacatatagtgaaatcgcttaaaagacttatatttaggaacgg 167
||||||||||||||||||||| ||||||||| ||||||||||||||||||| | ||||
Sbjct: 72 attttgctccgtatgtagacacctagtgaaatatcttaaaagacttatatttaagtacgg 13
Query: 168 aggaagtat 176
||| |||||
Sbjct: 12 agggagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttt 41
||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtcttt 109
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
|||||||||||| | ||||||||||||||| ||| |||||||||| | ||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64
Query: 72 a 72
|
Sbjct: 65 a 65
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 146 aaagacttatatttaggaacggaggaagtat 176
||||||||||||||||||||||||| |||||
Sbjct: 109 aaagacttatatttaggaacggagggagtat 139
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 73.8 bits (37), Expect = 8e-13
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgg 71
||||||||||||||||||||||||| | || ||| ||| ||||| || ||||||||||
Sbjct: 166 tactccctccgttcctaaatataagaccttttaggtattacacta-tgaactacatacgg 108
Query: 72 atgtatatagacatactttag 92
||||||||||||||| |||||
Sbjct: 107 atgtatatagacatattttag 87
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggaggaagtat 176
|||||||||||||||||||| |||||
Sbjct: 142 cttatatttaggaacggagggagtat 167
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtctttgtagagatttcacta 56
|||||||||| ||||||||||||||||||| || |||||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcacta 49
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggaggaagtatt 177
||||||||||||||||||| ||||| ||||||
Sbjct: 34 aaagacttatatttaggaaaggagggagtatt 3
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggaggaagtat 176
|||||||||||||||||||| |||||
Sbjct: 29 cttatatttaggaacggagggagtat 4
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa Japonica
Group
Length = 121
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggaggaagta 175
|||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggaggaagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataag 36
||||| ||||||||||||||||||||
Sbjct: 4 ctacttcctccgttcctaaatataag 29
>RF00906;MIR1122;AACV01007836.1/7963-7867 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 atctactccctccgttcctaaatataag 36
||||||||||||||| ||||||||||||
Sbjct: 96 atctactccctccgtccctaaatataag 69
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataa 35
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 atctactccctccgttcctaaatataag 36
||||||||||||||| ||||||||||||
Sbjct: 156 atctactccctccgtccctaaatataag 129
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataagt 37
|||||||||||||||| ||||||||||
Sbjct: 4 ctactccctccgttccaaaatataagt 30
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatata 34
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tctactccctccgttcctaaata 32
|||||||||||||||||||||||
Sbjct: 92 tctactccctccgttcctaaata 70
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tctactccctccgttcctaaatataag 36
|||||||||||||| ||||||||||||
Sbjct: 3 tctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tctactccctccgttcctaaatataag 36
|||||||||||||| ||||||||||||
Sbjct: 3 tctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tctactccctccgttcctaaatataag 36
|||||||||||||| ||||||||||||
Sbjct: 3 tctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatata 34
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 107 ctactccctccgtccctaaatataag 82
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 153 ctactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa
Indica Group
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 112 ctactccctccgtccctaaatataag 87
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC120985.3/48011-47950 39947:Oryza sativa
Japonica Group
Length = 62
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 59 ctactccctccgtccctaaatataag 34
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagt 37
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtccctaaatataag 129
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagt 37
||||| ||||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 129 ctactccctccgtccctaaatataag 104
